BP912474 |
Clone id |
YMU001_000019_H05 |
Library |
YMU01 |
Length |
367 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000019_H05. |
Accession |
BP912474 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL2087Contig1 |
Sequence |
CCCTCAGTACTGACTAAGCCCGCATTGTGGCATCAGCTCATACTCTCTGTTGTTGTTTAT AGTGCTTGGAATACTTTCAAAGAGCTCGAGTTTCTCGCACTTAGCATAAGTCTGCCCAAC ACTACATAAAATCAGTCAATCAAAAATGTCAACCCCACTTCATTCAGTCTCCATGCTTGC TTTGCAAATTGCATTTTTTCAATCTTGGTTGTATCCTCTTTCCTACCAGCAGCTGCATAT AAATTGCGCATGCAGATATATGGTGAAGCATCCTTATCATCTTCACAAATGGCTTGATCA AAGGCCCATCTTCCACATTTCACATTTCCCCATTTTTCACATGCACTTAACAAAGTAGTC CAAAGTG |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9LXF2 |
Definition |
sp|Q9LXF2|PP385_ARATH Pentatricopeptide repeat-containing protein At5g15300 OS=Arabidopsis thaliana |
Align length |
58 |
Score (bit) |
48.9 |
E-value |
8.0e-06 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
Q6Z0F9 |
Definition |
tr|Q6Z0F9|Q6Z0F9_ORYSJ Os08g0340900 protein OS=Oryza sativa subsp. japonica |
Align length |
57 |
Score (bit) |
52.0 |
E-value |
1.0e-05 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912474|Adiantum capillus-veneris mRNA, clone: YMU001_000019_H05. (367 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|Q6Z0F9|Q6Z0F9_ORYSJ Os08g0340900 protein OS=Oryza sativa subs... 52 1e-05 tr|B8B9V6|B8B9V6_ORYSI Putative uncharacterized protein OS=Oryza... 52 1e-05 tr|B3U1U3|B3U1U3_ISOEN Pentatricopeptide repeat protein (Fragmen... 52 1e-05 tr|A7QEC5|A7QEC5_VITVI Chromosome chr1 scaffold_84, whole genome... 52 1e-05 tr|A7PL13|A7PL13_VITVI Chromosome chr7 scaffold_20, whole genome... 52 1e-05 tr|A5AZY0|A5AZY0_VITVI Putative uncharacterized protein OS=Vitis... 52 1e-05 tr|A3BS46|A3BS46_ORYSJ Putative uncharacterized protein OS=Oryza... 52 1e-05 tr|A7R627|A7R627_VITVI Chromosome undetermined scaffold_1140, wh... 51 3e-05 tr|A7R3F3|A7R3F3_VITVI Chromosome undetermined scaffold_518, who... 51 3e-05 tr|A7QTX0|A7QTX0_VITVI Chromosome undetermined scaffold_171, who... 51 3e-05 tr|Q60EM0|Q60EM0_ORYSJ Os05g0455900 protein OS=Oryza sativa subs... 50 7e-05 tr|A7PA26|A7PA26_VITVI Chromosome chr14 scaffold_9, whole genome... 50 7e-05 tr|A2Y5C6|A2Y5C6_ORYSI Putative uncharacterized protein OS=Oryza... 50 7e-05 tr|Q7F2F8|Q7F2F8_ORYSJ P0402A09.8 protein (P0455C04.2 protein) O... 49 1e-04 tr|Q655L5|Q655L5_ORYSJ Putative uncharacterized protein P0672D08... 49 1e-04 tr|B8ACR8|B8ACR8_ORYSI Putative uncharacterized protein OS=Oryza... 49 1e-04 tr|A2ZN87|A2ZN87_ORYSJ Putative uncharacterized protein OS=Oryza... 49 1e-04 tr|A7R6Z1|A7R6Z1_VITVI Chromosome undetermined scaffold_1496, wh... 49 1e-04 tr|A7PXY9|A7PXY9_VITVI Chromosome chr15 scaffold_37, whole genom... 49 1e-04 tr|A5BWE3|A5BWE3_VITVI Putative uncharacterized protein OS=Vitis... 49 1e-04 tr|A9P0W0|A9P0W0_PICSI Putative uncharacterized protein OS=Picea... 48 2e-04 tr|A7R678|A7R678_VITVI Chromosome undetermined scaffold_1179, wh... 48 2e-04 tr|A7R1A1|A7R1A1_VITVI Chromosome undetermined scaffold_342, who... 48 2e-04 tr|A7NVQ5|A7NVQ5_VITVI Chromosome chr18 scaffold_1, whole genome... 48 2e-04 tr|A5BL66|A5BL66_VITVI Putative uncharacterized protein OS=Vitis... 48 2e-04 tr|A5BIR2|A5BIR2_VITVI Putative uncharacterized protein OS=Vitis... 48 2e-04 tr|Q75LD1|Q75LD1_ORYSJ Os03g0844000 protein OS=Oryza sativa subs... 48 3e-04 tr|Q10AR1|Q10AR1_ORYSJ Pentatricopeptide, putative, expressed OS... 48 3e-04 tr|B8AN81|B8AN81_ORYSI Putative uncharacterized protein OS=Oryza... 48 3e-04 tr|A7R0D7|A7R0D7_VITVI Chromosome chr6 scaffold_305, whole genom... 48 3e-04
>tr|Q6Z0F9|Q6Z0F9_ORYSJ Os08g0340900 protein OS=Oryza sativa subsp. japonica GN=OSJNBa0062G05.28 PE=2 SV=1 Length = 819
Score = 52.0 bits (123), Expect = 1e-05 Identities = 21/57 (36%), Positives = 35/57 (61%) Frame = -3
Query: 365 LWTTLLSACEKWGNVKCGRWAFDQAICEDDKDASPYICMRNLYAAAGRKEDTTKIEK 195 +W +LLSAC +GN + GR+A + A+ D D+ PY+ + N+YA+ G D + + Sbjct: 695 VWRSLLSACHLFGNAEIGRYAAEMALLADPTDSGPYVLLSNIYASKGLWADVHNLRQ 751
>tr|B8B9V6|B8B9V6_ORYSI Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_28874 PE=4 SV=1 Length = 434
Score = 52.0 bits (123), Expect = 1e-05 Identities = 21/57 (36%), Positives = 35/57 (61%) Frame = -3
Query: 365 LWTTLLSACEKWGNVKCGRWAFDQAICEDDKDASPYICMRNLYAAAGRKEDTTKIEK 195 +W +LLSAC +GN + GR+A + A+ D D+ PY+ + N+YA+ G D + + Sbjct: 156 VWRSLLSACHLFGNAEIGRYAAEMALLADPTDSGPYVLLSNIYASKGLWADVHNLRQ 212
>tr|B3U1U3|B3U1U3_ISOEN Pentatricopeptide repeat protein (Fragment) OS=Isoetes engelmannii GN=PPR PE=4 SV=1 Length = 155
Score = 52.0 bits (123), Expect = 1e-05 Identities = 23/65 (35%), Positives = 39/65 (60%) Frame = -3
Query: 362 WTTLLSACEKWGNVKCGRWAFDQAICEDDKDASPYICMRNLYAAAGRKEDTTKIEKMQFA 183 W TLL+AC +G+V+ GR F+Q + D A Y+ M +Y+ +G E+ KI++++ Sbjct: 1 WRTLLAACRTYGHVELGRRCFNQVVPIDPYHAGAYVLMSGIYSDSGLWEEALKIDELRQY 60
Query: 182 KQAWR 168 AW+ Sbjct: 61 ACAWK 65
>tr|A7QEC5|A7QEC5_VITVI Chromosome chr1 scaffold_84, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00036951001 PE=4 SV=1 Length = 595
Score = 52.0 bits (123), Expect = 1e-05 Identities = 26/58 (44%), Positives = 32/58 (55%) Frame = -3
Query: 365 LWTTLLSACEKWGNVKCGRWAFDQAICEDDKDASPYICMRNLYAAAGRKEDTTKIEKM 192 LW TLLSAC GNV+ G+ +Q DD YI + NL A AGR ED + K+ Sbjct: 393 LWRTLLSACGSHGNVELGKRVIEQIFELDDSHGGDYIILSNLCARAGRWEDVNYVRKL 450
>tr|A7PL13|A7PL13_VITVI Chromosome chr7 scaffold_20, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00019394001 PE=4 SV=1 Length = 812
Score = 52.0 bits (123), Expect = 1e-05 Identities = 23/55 (41%), Positives = 35/55 (63%) Frame = -3
Query: 365 LWTTLLSACEKWGNVKCGRWAFDQAICEDDKDASPYICMRNLYAAAGRKEDTTKI 201 +W +LLSAC GNV+ G++A + AI D KD+ YI + N++A+ G D K+ Sbjct: 690 VWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKV 744
>tr|A5AZY0|A5AZY0_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_038220 PE=4 SV=1 Length = 732
Score = 52.0 bits (123), Expect = 1e-05 Identities = 23/55 (41%), Positives = 35/55 (63%) Frame = -3
Query: 365 LWTTLLSACEKWGNVKCGRWAFDQAICEDDKDASPYICMRNLYAAAGRKEDTTKI 201 +W +LLSAC GNV+ G++A + AI D KD+ YI + N++A+ G D K+ Sbjct: 611 VWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKV 665
>tr|A3BS46|A3BS46_ORYSJ Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_025868 PE=4 SV=1 Length = 1010
Score = 52.0 bits (123), Expect = 1e-05 Identities = 21/57 (36%), Positives = 35/57 (61%) Frame = -3
Query: 365 LWTTLLSACEKWGNVKCGRWAFDQAICEDDKDASPYICMRNLYAAAGRKEDTTKIEK 195 +W +LLSAC +GN + GR+A + A+ D D+ PY+ + N+YA+ G D + + Sbjct: 886 VWRSLLSACHLFGNAEIGRYAAEMALLADPTDSGPYVLLSNIYASKGLWADVHNLRQ 942
>tr|A7R627|A7R627_VITVI Chromosome undetermined scaffold_1140, whole genome shotgun sequence (Fragment) OS=Vitis vinifera GN=GSVIVT00007922001 PE=4 SV=1 Length = 803
Score = 51.2 bits (121), Expect = 3e-05 Identities = 26/75 (34%), Positives = 43/75 (57%) Frame = -3
Query: 365 LWTTLLSACEKWGNVKCGRWAFDQAICEDDKDASPYICMRNLYAAAGRKEDTTKIEKMQF 186 +W TLL AC GN + GR A + + ++ D + YI + NL+A+AG+ +D KI K Sbjct: 613 VWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSM- 671
Query: 185 AKQAWRLNEVGLTFL 141 K+ + E G +++ Sbjct: 672 -KERNLIKEAGCSWI 685
>tr|A7R3F3|A7R3F3_VITVI Chromosome undetermined scaffold_518, whole genome shotgun sequence (Fragment) OS=Vitis vinifera GN=GSVIVT00013634001 PE=4 SV=1 Length = 1029
Score = 51.2 bits (121), Expect = 3e-05 Identities = 26/75 (34%), Positives = 43/75 (57%) Frame = -3
Query: 365 LWTTLLSACEKWGNVKCGRWAFDQAICEDDKDASPYICMRNLYAAAGRKEDTTKIEKMQF 186 +W TLL AC GN + GR A + + ++ D + YI + NL+A+AG+ +D KI K Sbjct: 828 VWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSM- 886
Query: 185 AKQAWRLNEVGLTFL 141 K+ + E G +++ Sbjct: 887 -KERNLIKEAGCSWI 900
>tr|A7QTX0|A7QTX0_VITVI Chromosome undetermined scaffold_171, whole genome shotgun sequence (Fragment) OS=Vitis vinifera GN=GSVIVT00006516001 PE=4 SV=1 Length = 737
Score = 51.2 bits (121), Expect = 3e-05 Identities = 26/75 (34%), Positives = 43/75 (57%) Frame = -3
Query: 365 LWTTLLSACEKWGNVKCGRWAFDQAICEDDKDASPYICMRNLYAAAGRKEDTTKIEKMQF 186 +W TLL AC GN + GR A + + ++ D + YI + NL+A+AG+ +D KI K Sbjct: 536 VWRTLLGACHVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIRKSM- 594
Query: 185 AKQAWRLNEVGLTFL 141 K+ + E G +++ Sbjct: 595 -KERNLIKEAGCSWI 608
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