BP912206 [AcEST]

BP912206
Clone id	YMU001_000016_D03
Library	YMU01
Length	484
Definition	Adiantum capillus-veneris mRNA. clone: YMU001_000016_D03.
Accession	BP912206
Tissue type	prothallium
Developmental stage	-
Contig ID	-
Sequence	GTCAGAGTCGAGGGAAGAAATTAGAGAAGTGCATTTGATGGGGTTTTCATTTGCTTGCAG CATGAAGATAATGTATTTTGAAGTTGCAGTGTTGATGCTTAGAGATTGAATTCCAACTAT GGAGCTTGCGGCTCCTAACTGTGTAGCCTACCGTAATTGCGGCATTTGCTAGAGTCGGGA GGCTCAATGTGAAGCATTGAGTTCCCTCCTTTTCAGTTATAGACATCAGGGTTTGTACAC TGTATATGTATATATTCCATAGCTGTTTTCCTCCTCTTCAAGGTGAATAAGATGTGCATA AGTGAAGCCTATCTAACTATTACTCTAGTTGTGTAAAGGGGTTCTTTAGATCTCTCTTCC GAGGATCAATTTTGTACTTTCTACCTTTATATAAGGGCGTTAAGCTTTTAATGCTAAAAG TATAGAGATGCTCTTGATTTTAATGCTCAAAAGTACTCTTCTTCTTCAAAAAAAAAAAAA AAAA
■■Homology search results ■■	-
Swiss-Prot (release 56.9)	Link to BlastX Result : Swiss-Prot
sp_hit_id	P21421
Definition	sp\|P21421\|RPOB_PLAFA DNA-directed RNA polymerase subunit beta OS=Plasmodium falciparum
Align length	34
Score (bit)	29.3
E-value	8.9
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP912206\|Adiantum capillus-veneris mRNA, clone: YMU001_000016_D03. (467 letters) Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value sp\|P21421\|RPOB_PLAFA DNA-directed RNA polymerase subunit beta OS... 29 8.9 >sp\|P21421\|RPOB_PLAFA DNA-directed RNA polymerase subunit beta OS=Plasmodium falciparum GN=rpoB PE=3 SV=2 Length = 1024 Score = 29.3 bits (64), Expect = 8.9 Identities = 13/34 (38%), Positives = 19/34 (55%) Frame = +3 Query: 321 YSSCVKGFFRSLFRGSILYFLPLYKGVKLLMLKV 422 Y SC+K R LF I+Y+L YK + +L + Sbjct: 536 YVSCIKIIIRDLFNRQIIYYLNNYKKINQNILLI 569
TrEMBL (release 39.9)	Link to BlastX Result : TrEMBL
tr_hit_id	-
Definition	No hits.
Align length	-
Score (bit)	-
E-value	-
Report	BLASTX 2.2.19 [Nov-02-2008] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BP912206\|Adiantum capillus-veneris mRNA, clone: YMU001_000016_D03. (467 letters) Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters Searching..................................................done *** No hits found ****