BP912125 |
Clone id |
YMU001_000015_D07 |
Library |
YMU01 |
Length |
558 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000015_D07. |
Accession |
BP912125 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
- |
Sequence |
GGAACAAAGCATTACTAAGAATCTTGATACTCTTGCAGTAGCAATAGGAGAAAATCTTTC AAAAGTAAACATACCATTCAGGGTACGCATTTCAACCTTGAAGATGATTGTCACACCAAC TTGGAATTTGCCCTTCAGCTACTACCTAATAAAATGTAGCCCTTCTGCTGCCACTGAGAA ACAGCACATTCAGCTTGATATTCTGCCTTTCTTGTCCAAAAGTTTTAACCGATTTTATAT TTCATACATAGCAGCCAATTGATTATGGCTACTATCTCCAAGAAAATACTACGTACATTT TTTTGTGCTTTAATGCAAGGAACAGCCAATTTCTACCAAGAATCTTCACTGACCATATGG TCCAAGCATTTTCGCCCAAGGTCCACATTGCTAAACAACCTGCAACTATTAAGCAACGAT GTCTGTGCTACACAATTAAAAGCGCCTTTTGTACATACAAGAGTCTCACTAACCTCATTG AAGAGTCCTGCCCGACCTAGAAGATCTAACAAACAATTGTAATGTTCAGCTGTCGGAGTT ATCCCATATCGCTCTTTC |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q9C501 |
Definition |
sp|Q9C501|PPR70_ARATH Pentatricopeptide repeat-containing protein At1g33350 OS=Arabidopsis thaliana |
Align length |
68 |
Score (bit) |
59.7 |
E-value |
9.0e-09 |
Report |
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
B6SSC4 |
Definition |
tr|B6SSC4|B6SSC4_MAIZE Pentatricopeptide repeat protein PPR868-14 OS=Zea mays |
Align length |
69 |
Score (bit) |
63.2 |
E-value |
9.0e-09 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912125|Adiantum capillus-veneris mRNA, clone: YMU001_000015_D07. (558 letters)
Database: uniprot_trembl.fasta 7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
tr|B6SSC4|B6SSC4_MAIZE Pentatricopeptide repeat protein PPR868-1... 63 9e-09 tr|Q9ZUE8|Q9ZUE8_ARATH F5O8.1 protein OS=Arabidopsis thaliana GN... 63 1e-08 tr|Q9LQD1|Q9LQD1_ARATH F28C11.9 OS=Arabidopsis thaliana PE=3 SV=1 63 1e-08 tr|Q84KA5|Q84KA5_CUCME Selenium binding protein-like protein OS=... 62 2e-08 tr|Q6GX28|Q6GX28_CUCME Selenium binding protein-like (Fragment) ... 62 2e-08 tr|A7PRP6|A7PRP6_VITVI Chromosome chr14 scaffold_27, whole genom... 62 2e-08 tr|B8LLJ0|B8LLJ0_PICSI Putative uncharacterized protein OS=Picea... 62 3e-08 tr|A7PMY8|A7PMY8_VITVI Chromosome chr14 scaffold_21, whole genom... 62 3e-08 tr|A7PIZ1|A7PIZ1_VITVI Chromosome chr13 scaffold_17, whole genom... 62 3e-08 tr|A5ADX7|A5ADX7_VITVI Putative uncharacterized protein OS=Vitis... 62 3e-08 tr|Q8GRU0|Q8GRU0_ORYSJ Os07g0113500 protein OS=Oryza sativa subs... 61 5e-08 tr|A7NWV1|A7NWV1_VITVI Chromosome chr5 scaffold_2, whole genome ... 61 5e-08 tr|A5AME8|A5AME8_VITVI Putative uncharacterized protein OS=Vitis... 61 5e-08 tr|A2YHI6|A2YHI6_ORYSI Putative uncharacterized protein OS=Oryza... 61 5e-08 tr|A9P0W0|A9P0W0_PICSI Putative uncharacterized protein OS=Picea... 53 8e-08 tr|Q7XV62|Q7XV62_ORYSJ OSJNBa0006B20.5 protein (Putative unchara... 59 1e-07 tr|B8AU15|B8AU15_ORYSI Putative uncharacterized protein OS=Oryza... 59 1e-07 tr|A7PEB0|A7PEB0_VITVI Chromosome chr11 scaffold_13, whole genom... 59 1e-07 tr|A7PD58|A7PD58_VITVI Chromosome chr17 scaffold_12, whole genom... 59 1e-07 tr|A7P886|A7P886_VITVI Chromosome chr3 scaffold_8, whole genome ... 59 1e-07 tr|A7Q9C2|A7Q9C2_VITVI Chromosome chr19 scaffold_66, whole genom... 59 2e-07 tr|A5APN9|A5APN9_VITVI Putative uncharacterized protein OS=Vitis... 59 2e-07 tr|B8BC26|B8BC26_ORYSI Putative uncharacterized protein OS=Oryza... 59 2e-07 tr|A7QUT6|A7QUT6_VITVI Chromosome chr1 scaffold_180, whole genom... 59 2e-07 tr|A3BUF1|A3BUF1_ORYSJ Putative uncharacterized protein OS=Oryza... 59 2e-07 tr|Q7F2F8|Q7F2F8_ORYSJ P0402A09.8 protein (P0455C04.2 protein) O... 58 4e-07 tr|Q655L5|Q655L5_ORYSJ Putative uncharacterized protein P0672D08... 58 4e-07 tr|B8ACR8|B8ACR8_ORYSI Putative uncharacterized protein OS=Oryza... 58 4e-07 tr|A2ZN87|A2ZN87_ORYSJ Putative uncharacterized protein OS=Oryza... 58 4e-07 tr|Q67X39|Q67X39_ORYSJ Pentatricopeptide (PPR) repeat-containing... 57 5e-07
>tr|B6SSC4|B6SSC4_MAIZE Pentatricopeptide repeat protein PPR868-14 OS=Zea mays PE=2 SV=1 Length = 633
Score = 63.2 bits (152), Expect = 9e-09 Identities = 29/69 (42%), Positives = 41/69 (59%) Frame = -2
Query: 557 KERYGITPTAEHYNCLLDLLGRAGLFNEVSETLVCTKGAFNCVAQTSLLNSCRLFSNVDL 378 +E YGI P EHY C++DLLGRAG E + + K + SLL +CRL N+ L Sbjct: 389 EEEYGIVPKVEHYGCMVDLLGRAGRVEEAFDLVQSMKAKPDAAMWASLLGACRLHKNLAL 448
Query: 377 GRKCLDHMV 351 G++ D++V Sbjct: 449 GQRVADYLV 457
>tr|Q9ZUE8|Q9ZUE8_ARATH F5O8.1 protein OS=Arabidopsis thaliana GN=F5O8.1 PE=4 SV=1 Length = 278
Score = 62.8 bits (151), Expect = 1e-08 Identities = 28/70 (40%), Positives = 46/70 (65%) Frame = -2
Query: 557 KERYGITPTAEHYNCLLDLLGRAGLFNEVSETLVCTKGAFNCVAQTSLLNSCRLFSNVDL 378 + +YGI+P + Y C++DLLGRAGL + L+ +G +CVA +SLL SCR+ N + Sbjct: 159 ESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIHRNETI 218
Query: 377 GRKCLDHMVS 348 GR+ + +++ Sbjct: 219 GRRAAEVLMN 228
>tr|Q9LQD1|Q9LQD1_ARATH F28C11.9 OS=Arabidopsis thaliana PE=3 SV=1 Length = 1161
Score = 62.8 bits (151), Expect = 1e-08 Identities = 28/70 (40%), Positives = 46/70 (65%) Frame = -2
Query: 557 KERYGITPTAEHYNCLLDLLGRAGLFNEVSETLVCTKGAFNCVAQTSLLNSCRLFSNVDL 378 + +YGI+P + Y C++DLLGRAGL + L+ +G +CVA +SLL SCR+ N + Sbjct: 547 ESKYGISPGRKLYACMVDLLGRAGLVEKAERLLLQARGDADCVAWSSLLQSCRIHRNETI 606
Query: 377 GRKCLDHMVS 348 GR+ + +++ Sbjct: 607 GRRAAEVLMN 616
>tr|Q84KA5|Q84KA5_CUCME Selenium binding protein-like protein OS=Cucumis melo GN=Sbp1 PE=4 SV=1 Length = 565
Score = 62.4 bits (150), Expect = 2e-08 Identities = 30/68 (44%), Positives = 38/68 (55%) Frame = -2
Query: 554 ERYGITPTAEHYNCLLDLLGRAGLFNEVSETLVCTKGAFNCVAQTSLLNSCRLFSNVDLG 375 E YGI PT EHY C++DLL RAG E E LV N +S+LN C ++ NV L Sbjct: 444 EVYGIEPTMEHYGCMIDLLSRAGHSEEAEELLVKMPTQPNATILSSILNGCEMYGNVGLA 503
Query: 374 RKCLDHMV 351 + H+V Sbjct: 504 NRVKSHIV 511
>tr|Q6GX28|Q6GX28_CUCME Selenium binding protein-like (Fragment) OS=Cucumis melo GN=Sbp1 PE=2 SV=1 Length = 149
Score = 62.4 bits (150), Expect = 2e-08 Identities = 30/68 (44%), Positives = 38/68 (55%) Frame = -2
Query: 554 ERYGITPTAEHYNCLLDLLGRAGLFNEVSETLVCTKGAFNCVAQTSLLNSCRLFSNVDLG 375 E YGI PT EHY C++DLL RAG E E LV N +S+LN C ++ NV L Sbjct: 54 EVYGIEPTMEHYGCMIDLLSRAGHSEEAEELLVKMPTQPNATILSSILNGCEMYGNVGLA 113
Query: 374 RKCLDHMV 351 + H+V Sbjct: 114 NRVKSHIV 121
>tr|A7PRP6|A7PRP6_VITVI Chromosome chr14 scaffold_27, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00022584001 PE=4 SV=1 Length = 535
Score = 62.4 bits (150), Expect = 2e-08 Identities = 25/71 (35%), Positives = 43/71 (60%) Frame = -2
Query: 548 YGITPTAEHYNCLLDLLGRAGLFNEVSETLVCTKGAFNCVAQTSLLNSCRLFSNVDLGRK 369 +G+ PT EH+ C++DLLGRAGL ++ + + N SLLN+CR++ NV++G Sbjct: 387 FGVEPTVEHFGCVVDLLGRAGLIDQAMQLISEMPFEPNAAIWGSLLNACRVYKNVEIGEL 446
Query: 368 CLDHMVSEDSW 336 ++ ++ W Sbjct: 447 AAQWLIKDEPW 457
>tr|B8LLJ0|B8LLJ0_PICSI Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1 Length = 644
Score = 61.6 bits (148), Expect = 3e-08 Identities = 28/67 (41%), Positives = 42/67 (62%) Frame = -2
Query: 548 YGITPTAEHYNCLLDLLGRAGLFNEVSETLVCTKGAFNCVAQTSLLNSCRLFSNVDLGRK 369 Y ITP EHY C++DLLGRAG F+E ++ + + SLL++CR +N+DLG K Sbjct: 519 YHITPAMEHYGCMIDLLGRAGCFDEANDLINKMPIKPDADMWGSLLSACRTHNNIDLGEK 578
Query: 368 CLDHMVS 348 H+++ Sbjct: 579 VAQHLIA 585
>tr|A7PMY8|A7PMY8_VITVI Chromosome chr14 scaffold_21, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00020997001 PE=4 SV=1 Length = 515
Score = 61.6 bits (148), Expect = 3e-08 Identities = 27/63 (42%), Positives = 39/63 (61%) Frame = -2
Query: 557 KERYGITPTAEHYNCLLDLLGRAGLFNEVSETLVCTKGAFNCVAQTSLLNSCRLFSNVDL 378 ++ Y I P HY C++DLLGRAGL NE + + K N + +LL +CR+ NV+L Sbjct: 370 RDEYNIEPNIRHYGCMVDLLGRAGLLNEAFDFIDTMKIEPNAIVWRTLLGACRIHGNVEL 429
Query: 377 GRK 369 GR+ Sbjct: 430 GRR 432
>tr|A7PIZ1|A7PIZ1_VITVI Chromosome chr13 scaffold_17, whole genome shotgun sequence OS=Vitis vinifera GN=GSVIVT00018529001 PE=4 SV=1 Length = 1005
Score = 61.6 bits (148), Expect = 3e-08 Identities = 31/68 (45%), Positives = 41/68 (60%) Frame = -2
Query: 554 ERYGITPTAEHYNCLLDLLGRAGLFNEVSETLVCTKGAFNCVAQTSLLNSCRLFSNVDLG 375 ++Y I P EHY C++DLLGRAGLF+E + + +LL SCR+ SNV LG Sbjct: 762 DKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLG 821
Query: 374 RKCLDHMV 351 LDH+V Sbjct: 822 EVALDHLV 829
>tr|A5ADX7|A5ADX7_VITVI Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_010010 PE=4 SV=1 Length = 1005
Score = 61.6 bits (148), Expect = 3e-08 Identities = 31/68 (45%), Positives = 41/68 (60%) Frame = -2
Query: 554 ERYGITPTAEHYNCLLDLLGRAGLFNEVSETLVCTKGAFNCVAQTSLLNSCRLFSNVDLG 375 ++Y I P EHY C++DLLGRAGLF+E + + +LL SCR+ SNV LG Sbjct: 762 DKYHIKPDLEHYACMVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLG 821
Query: 374 RKCLDHMV 351 LDH+V Sbjct: 822 EVALDHLV 829
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