BP912086 |
Clone id |
YMU001_000012_H07 |
Library |
YMU01 |
Length |
536 |
Definition |
Adiantum capillus-veneris mRNA. clone: YMU001_000012_H07. |
Accession |
BP912086 |
Tissue type |
prothallium |
Developmental stage |
- |
Contig ID |
CL1211Contig1 |
Sequence |
AACGGGGATCAATCAATCATTACTAGTTAAGTTCCCCGCTTGGCCTGCCTGCCAATTATC ACCTGACCATCCCATTGCCAAGCCGAAAATCCTAGCCGCAAGCTCACGTGTGCCGACTCG AAAGTGCCCGGCTCCTACCGCATTTCGAGATTCCCCAAAATCCCGAACCGAGGCCGCAAA AATGCTAGATTTCATCTGCAATTAACTCCGAGCAACTGCACCCAATCTTCCGACTTCCAT AACTTTCCGCTCCGAACTCCGTTTGACAAGCAGTCAATCCCTGCTAAGTCCATATGATGC ATACCTCGCTCTAGAACTCTGTCGAAGTCCAAAAAATACCATATGGCACGGCTCCCCATG CAATCACGTGGGCATCAACCGGACCCCTGGCAAAACTTCAAATGGCCATATCCAACAATC TGTAGCTCCGATCTGCAATCTGAAAAGACTAGCATGCTCCATAAATTGAGCACTACGCGT CTATACACTGACATCACCTTGGACCACCTGTCCCTAGCTGCCCTATCCGGCAAGAA |
■■Homology search results ■■ |
- |
Swiss-Prot (release 56.9) |
Link to BlastX Result : Swiss-Prot |
sp_hit_id |
Q84JS6 |
Definition |
sp|Q84JS6|KNAT6_ARATH Homeobox protein knotted-1-like 6 OS=Arabidopsis thaliana |
Align length |
34 |
Score (bit) |
31.2 |
E-value |
3.3 |
Report |
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402.
Query= BP912086|Adiantum capillus-veneris mRNA, clone: YMU001_000012_H07. (536 letters)
Database: uniprot_sprot.fasta 412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E Sequences producing significant alignments: (bits) Value
sp|Q84JS6|KNAT6_ARATH Homeobox protein knotted-1-like 6 OS=Arabi... 31 3.3 sp|Q99KW3|TARA_MOUSE TRIO and F-actin-binding protein OS=Mus mus... 31 4.3 sp|Q4WYE5|MUS81_ASPFU Crossover junction endonuclease mus81 OS=A... 31 4.3 sp|P24345|KN1_MAIZE Homeotic protein knotted-1 OS=Zea mays GN=KN... 31 4.3 sp|Q2JFH0|RS3_FRASC 30S ribosomal protein S3 OS=Frankia sp. (str... 30 5.7 sp|P56668|KNX11_MAIZE Homeobox protein knotted-1-like 11 (Fragme... 30 5.7 sp|P56663|KNOX5_MAIZE Homeobox protein knotted-1-like 5 (Fragmen... 30 5.7 sp|Q7GDL5|KNOSA_ORYSJ Homeobox protein knotted-1-like 10 OS=Oryz... 30 5.7 sp|A2Y007|KNOSA_ORYSI Homeobox protein knotted-1-like 10 OS=Oryz... 30 5.7 sp|Q5VWN6|CJ018_HUMAN Uncharacterized protein C10orf18 OS=Homo s... 30 5.7 sp|Q66HX0|S35B1_DANRE Solute carrier family 35 member B1 OS=Dani... 30 7.4 sp|Q62925|M3K1_RAT Mitogen-activated protein kinase kinase kinas... 30 7.4 sp|P46640|KNAT2_ARATH Homeobox protein knotted-1-like 2 OS=Arabi... 30 7.4 sp|Q43484|KNOX3_HORVU Homeobox protein KNOX3 OS=Hordeum vulgare ... 30 9.7 sp|Q75LX7|KNOS4_ORYSJ Homeobox protein knotted-1-like 4 OS=Oryza... 30 9.7 sp|O04134|KNAP1_MALDO Homeobox protein knotted-1-like 1 OS=Malus... 30 9.7 sp|Q0CHV5|IML1_ASPTN Vacuolar membrane-associated protein iml1 O... 30 9.7
>sp|Q84JS6|KNAT6_ARATH Homeobox protein knotted-1-like 6 OS=Arabidopsis thaliana GN=KNAT6 PE=1 SV=1 Length = 327
Score = 31.2 bits (69), Expect = 3.3 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 1/34 (2%) Frame = +1
Query: 319 LSKSKKYHMARLPMQSRGHQPDPWQ-NFKWPYPT 417 L SKK +LP ++R D W ++KWPYPT Sbjct: 242 LEFSKKKKKGKLPREARQALLDWWNLHYKWPYPT 275
>sp|Q99KW3|TARA_MOUSE TRIO and F-actin-binding protein OS=Mus musculus GN=Triobp PE=1 SV=3 Length = 2014
Score = 30.8 bits (68), Expect = 4.3 Identities = 17/50 (34%), Positives = 21/50 (42%) Frame = +1
Query: 304 PRSRTLSKSKKYHMARLPMQSRGHQPDPWQNFKWPYPTICSSDLQSEKTS 453 P S + + RL SR HQP P W P CS LQ E ++ Sbjct: 1154 PPSNGIQGAPPRGQGRLQELSRPHQPTPSSENSWAGPAECSCALQPEAST 1203
>sp|Q4WYE5|MUS81_ASPFU Crossover junction endonuclease mus81 OS=Aspergillus fumigatus GN=mus81 PE=3 SV=1 Length = 596
Score = 30.8 bits (68), Expect = 4.3 Identities = 15/39 (38%), Positives = 23/39 (58%) Frame = +2
Query: 206 LRATAPNLPTSITFRSELRLTSSQSLLSPYDAYLALELC 322 LRA P++ S+TF + LTS +LS D +L + +C Sbjct: 491 LRARDPSVTYSVTFSTFSALTSKSDILSLRDVFLKMLMC 529
>sp|P24345|KN1_MAIZE Homeotic protein knotted-1 OS=Zea mays GN=KN-1 PE=2 SV=1 Length = 359
Score = 30.8 bits (68), Expect = 4.3 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 1/44 (2%) Frame = +1
Query: 328 SKKYHMARLPMQSRGHQPDPW-QNFKWPYPTICSSDLQSEKTSM 456 SKK +LP ++R W Q++KWPYP+ +E T + Sbjct: 263 SKKKKKGKLPKEARQQLLSWWDQHYKWPYPSETQKVALAESTGL 306
>sp|Q2JFH0|RS3_FRASC 30S ribosomal protein S3 OS=Frankia sp. (strain CcI3) GN=rpsC PE=3 SV=1 Length = 315
Score = 30.4 bits (67), Expect = 5.7 Identities = 15/46 (32%), Positives = 21/46 (45%) Frame = +2
Query: 35 PAWPACQLSPDHPIAKPKILAASSRVPTRKCPAPTAFRDSPKSRTE 172 PA A P P+A+P AAS+ PA A ++P+ E Sbjct: 270 PAGEAAATEPTAPVAEPATAAASAPAEAASAPAEAAVANTPEKAEE 315
>sp|P56668|KNX11_MAIZE Homeobox protein knotted-1-like 11 (Fragment) OS=Zea mays GN=KNOX11 PE=3 SV=1 Length = 88
Score = 30.4 bits (67), Expect = 5.7 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%) Frame = +1
Query: 307 RSRTLSKSKKYHMARLPMQSRGHQPDPWQ-NFKWPYPT 417 RS L K KK +LP +R D W +++WPYPT Sbjct: 21 RSEFLKKRKK---GKLPKDARSALMDWWNTHYRWPYPT 55
>sp|P56663|KNOX5_MAIZE Homeobox protein knotted-1-like 5 (Fragment) OS=Zea mays GN=KNOX5 PE=2 SV=1 Length = 85
Score = 30.4 bits (67), Expect = 5.7 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%) Frame = +1
Query: 307 RSRTLSKSKKYHMARLPMQSRGHQPDPWQ-NFKWPYPT 417 RS L K KK +LP +R D W +++WPYPT Sbjct: 18 RSEFLKKRKK---GKLPKDARSALMDWWNTHYRWPYPT 52
>sp|Q7GDL5|KNOSA_ORYSJ Homeobox protein knotted-1-like 10 OS=Oryza sativa subsp. japonica GN=OSH71 PE=2 SV=1 Length = 311
Score = 30.4 bits (67), Expect = 5.7 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%) Frame = +1
Query: 307 RSRTLSKSKKYHMARLPMQSRGHQPDPWQ-NFKWPYPT 417 RS L K KK +LP +R D W +++WPYPT Sbjct: 214 RSEFLKKRKK---GKLPKDARSALMDWWNTHYRWPYPT 248
>sp|A2Y007|KNOSA_ORYSI Homeobox protein knotted-1-like 10 OS=Oryza sativa subsp. indica GN=OSH71 PE=2 SV=2 Length = 311
Score = 30.4 bits (67), Expect = 5.7 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%) Frame = +1
Query: 307 RSRTLSKSKKYHMARLPMQSRGHQPDPWQ-NFKWPYPT 417 RS L K KK +LP +R D W +++WPYPT Sbjct: 214 RSEFLKKRKK---GKLPKDARSALMDWWNTHYRWPYPT 248
>sp|Q5VWN6|CJ018_HUMAN Uncharacterized protein C10orf18 OS=Homo sapiens GN=C10orf18 PE=1 SV=1 Length = 2430
Score = 30.4 bits (67), Expect = 5.7 Identities = 36/140 (25%), Positives = 54/140 (38%), Gaps = 16/140 (11%) Frame = +2
Query: 53 QLSPDHPIAKPKILAASSRVPTRKCPAPTAFRDSP-----KSRTEAAKMLD--FICN*LR 211 Q PD P+ KPK S+RV C D K TE A LD + N L Sbjct: 708 QKPPDDPVVKPKDRPPSARVKKSSCSRIVLSCDDSVKITFKCETEYAFSLDSKYTNNPLE 767
Query: 212 ATA---------PNLPTSITFRSELRLTSSQSLLSPYDAYLALELCRSPKNTIWHGSPCN 364 T +LP ++ E++L + Y ++ RS + + H +P Sbjct: 768 KTVVRALHGPWNTDLPDNV---EEVKLLLHMWVALFYSN--QNKIIRSSRKVVEHSNPAK 822
Query: 365 HVGINRTPGKTSNGHIQQSV 424 +V IN T I++S+ Sbjct: 823 YVSINSTLESCELREIEESL 842
|
TrEMBL (release 39.9) |
Link to BlastX Result : TrEMBL |
tr_hit_id |
A7T5Z2 |
Definition |
tr|A7T5Z2|A7T5Z2_NEMVE Predicted protein (Fragment) OS=Nematostella vectensis |
Align length |
110 |
Score (bit) |
36.2 |
E-value |
1.1 |
Report |
|