BP911957
Clone id YMU001_000011_C07
Library
Length 599
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000011_C07.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TGCCTAAAGGTTTACCACTTGGCAGATAATATATGTTGTGTTGCACATCCCATGTAGATG
GTAAACCAGTATGTAAGTCATTAAAAAAAACATTGATGTATTCTTGAAGAAACTCCTTCC
CTTGCAGAGGCATCTTTAACTTGAGTATCCCTGACTTTGGTGTCGTGCCTGTTAATCAAT
GCTACCTTCTAACAATGTGACATGGCCATTTGTGGAAGATTGAGCTTCTTAACTGAATTA
TAGTTAAGAAAATTCGTGATTTTCTCAAAAAGAAGGAAATTTGCTATAGTTAAGAAAATT
CATGATTTTCTTGAAAAAAAGGAACTTTGCTACAATTCTCTTGAATTTGTTGTAGCTTGT
TATGATTTCAATGAGGAACTTGAGAATCAATCTACGTGCACATTGTTATGCCCTTGTCTG
CACACAAATAACTACTTAAAAAAGATGGGCCTTCATTCTAACACAAATAATTAAACATCA
AGTACTTTAGTACACAATGTGATTTGCACTTGGGGGCCTAGGATTTGAGGCCAACAATGT
GCAAGATTATTTACCTCTCTCTCTCGCAGGTACTCGAGTACCTGCAGGTAATATCTCAA
■■Homology search results ■■ -
sp_hit_id Q6TND0
Definition sp|Q6TND0|MATK_DALWR Maturase K OS=Dalea wrightii
Align length 28
Score (bit) 30.8
E-value 5.5
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911957|Adiantum capillus-veneris mRNA, clone:
YMU001_000011_C07.
(599 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6TND0|MATK_DALWR Maturase K OS=Dalea wrightii GN=matK PE=3 SV=1 31 5.5
sp|Q6TND4|MATK_DALPU Maturase K OS=Dalea purpurea GN=matK PE=3 SV=1 31 5.5
sp|P15804|CAPP3_SORBI Phosphoenolpyruvate carboxylase 3 OS=Sorgh... 30 9.3

>sp|Q6TND0|MATK_DALWR Maturase K OS=Dalea wrightii GN=matK PE=3 SV=1
Length = 512

Score = 30.8 bits (68), Expect = 5.5
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -3

Query: 369 EIITSYNKFKRIVAKFLFFKKIMNFLNY 286
E+I SYNK + I A F FF+ +LNY
Sbjct: 122 EVIKSYNKLRSIHAIFPFFEDKFTYLNY 149


>sp|Q6TND4|MATK_DALPU Maturase K OS=Dalea purpurea GN=matK PE=3 SV=1
Length = 509

Score = 30.8 bits (68), Expect = 5.5
Identities = 14/28 (50%), Positives = 18/28 (64%)
Frame = -3

Query: 369 EIITSYNKFKRIVAKFLFFKKIMNFLNY 286
E+I SYNK + I A F FF+ +LNY
Sbjct: 119 EVIKSYNKLRSIHAIFPFFEDKFTYLNY 146


>sp|P15804|CAPP3_SORBI Phosphoenolpyruvate carboxylase 3 OS=Sorghum
bicolor PE=1 SV=2
Length = 960

Score = 30.0 bits (66), Expect = 9.3
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +1

Query: 262 FSKRRKFAIVKKIHDFLEKKELCYNSL 342
FS+ + A+ KI +FLE ELCY SL
Sbjct: 388 FSEISEDAVFTKIEEFLEPLELCYKSL 414


tr_hit_id -
Definition No hits.
Align length -
Score (bit) -
E-value -
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911957|Adiantum capillus-veneris mRNA, clone:
YMU001_000011_C07.
(599 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done

***** No hits found ******