BP911764
Clone id YMU001_000008_H09
Library
Length 497
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000008_H09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AAACCCTTTTCAAAATCCATTGCACTGTCAGGTTGCTCTCCTGATAGAAGTAATCCAAGT
TGCTTGATGCGCAAACAGAAAGTAAGATAAGACCACTAGTTGTGCTCTTGAATATTTTCA
ACCCAAAAGGGGGCAGCTGACTCCTTCTGACCAGCCTAGCAATGAACAAAAGAACTCGAA
ATCCATGCACTTGAAGAGAAGAGAACACCAACAAAGTTGTAATCATTACAAAATCCAAAA
AATTTCCTGTCTCGGAGAGACCCAATACAATAAGAACTTGTCGAATCCAGTTGCCAGCAA
TGGCTATTTGGTCCGCAATGAGGGTTAGCCTTAACAAATACAGCATCGCAACATGGGTCC
CACAAAAAATTATCACGTAGTGCCTCATTCTTGTGGATAAATCTGGCTTTAGCAGAAATG
CCAGGAAGAAAATCACTGACTGCCCAAAATGGTGCCGATTCTGACTGATGTACAAAGCAT
GCCGAAGGCGACATCTG
■■Homology search results ■■ -
sp_hit_id P36495
Definition sp|P36495|YCF78_CHLRE Uncharacterized membrane protein ycf78 OS=Chlamydomonas reinhardtii
Align length 62
Score (bit) 32.0
E-value 1.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911764|Adiantum capillus-veneris mRNA, clone:
YMU001_000008_H09.
(497 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|P36495|YCF78_CHLRE Uncharacterized membrane protein ycf78 OS=... 32 1.6
sp|Q00111|VG45_ICHV1 Uncharacterized gene 45 protein OS=Ictaluri... 32 2.1
sp|Q8K942|TSGA_BUCAP Protein tsgA homolog OS=Buchnera aphidicola... 31 2.8
sp|O75962|TRIO_HUMAN Triple functional domain protein OS=Homo sa... 31 3.6
sp|P03913|NU4M_ASPAM NADH-ubiquinone oxidoreductase chain 4 OS=A... 30 4.7
sp|Q4ZXC3|CYOE_PSEU2 Protoheme IX farnesyltransferase OS=Pseudom... 30 6.1
sp|Q9NZL6|RGL1_HUMAN Ral guanine nucleotide dissociation stimula... 30 8.0
sp|Q4G0P3|HYDIN_HUMAN Hydrocephalus-inducing protein homolog OS=... 30 8.0

>sp|P36495|YCF78_CHLRE Uncharacterized membrane protein ycf78
OS=Chlamydomonas reinhardtii GN=ycf78 PE=3 SV=2
Length = 1995

Score = 32.0 bits (71), Expect = 1.6
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = +2

Query: 125 KRGQLTPSDQPSNEQKNSKSMHLKRREHQQSCNHYKIQKISCLGETQ---YNKNLSNPVA 295
++ +LT S + S +K S+ KR HQ S NHYK +K G + NK L A
Sbjct: 1411 RKQELTNSLKKSQIKKRSRHSWKKRSRHQFSRNHYKYRKRHTHGNGKLRVMNKKLKKFKA 1470

Query: 296 SN 301
+N
Sbjct: 1471 TN 1472


>sp|Q00111|VG45_ICHV1 Uncharacterized gene 45 protein OS=Ictalurid
herpesvirus 1 GN=45 PE=4 SV=1
Length = 240

Score = 31.6 bits (70), Expect = 2.1
Identities = 15/40 (37%), Positives = 20/40 (50%)
Frame = +3

Query: 246 PVSERPNTIRTCRIQLPAMAIWSAMRVSLNKYSIATWVPQ 365
P S RP T + R+ P W RV ++ ATW+PQ
Sbjct: 141 PTSPRPITTESSRVS-PTKEKWGRKRVHKKTHAEATWIPQ 179


>sp|Q8K942|TSGA_BUCAP Protein tsgA homolog OS=Buchnera aphidicola
subsp. Schizaphis graminum GN=tsgA PE=3 SV=1
Length = 387

Score = 31.2 bits (69), Expect = 2.8
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 4/68 (5%)
Frame = +3

Query: 216 VVIITKSKKFPVSERP----NTIRTCRIQLPAMAIWSAMRVSLNKYSIATWVPQKIIT*C 383
+ I+T FPVSE N I+ I + ++I SA+ L + S +WVPQ
Sbjct: 176 IFILTVKSHFPVSEEKTKNNNEIKNLNINIILLSI-SALLYILGQLSFISWVPQYTTEII 234

Query: 384 LILVDKSG 407
I + K+G
Sbjct: 235 NINIKKTG 242


>sp|O75962|TRIO_HUMAN Triple functional domain protein OS=Homo sapiens
GN=TRIO PE=1 SV=1
Length = 3038

Score = 30.8 bits (68), Expect = 3.6
Identities = 24/89 (26%), Positives = 39/89 (43%)
Frame = +2

Query: 116 FQPKRGQLTPSDQPSNEQKNSKSMHLKRREHQQSCNHYKIQKISCLGETQYNKNLSNPVA 295
F P L S P +E + KS LKRR HY +Q++ E Y ++L V
Sbjct: 1883 FNPSDNSLLSSSSPIDEMEERKSSSLKRR-------HYVLQEL-VETERDYVRDLGYVVE 1934

Query: 296 SNGYLVRNEG*P*QIQHRNMGPTKNYHVV 382
L++ +G P ++ ++ N H +
Sbjct: 1935 GYMALMKEDGVPDDMKGKDKIVFGNIHQI 1963


>sp|P03913|NU4M_ASPAM NADH-ubiquinone oxidoreductase chain 4
OS=Aspergillus amstelodami GN=ND4 PE=3 SV=1
Length = 488

Score = 30.4 bits (67), Expect = 4.7
Identities = 36/119 (30%), Positives = 53/119 (44%), Gaps = 10/119 (8%)
Frame = -2

Query: 439 SVIFFLAFLLKPDLSTRM-----RHYVI----IFCGTHVAMLYLLRLTLIADQIAIAGNW 287
S+I F+ F D S++ HY I I+ G +Y + LT I IAI NW
Sbjct: 47 SLIMFILF----DFSSKQFQFIEEHYQISYFDIYLGVDGLSIYFILLTTIIMPIAILCNW 102

Query: 286 IRQVLIVLGLSETGNFLDFVMITTLLVFSSLQVHGFRVL-LFIARLVRRSQLPPFGLKI 113
++ N L FV+I +L+ +L + F VL + + + S LPP L I
Sbjct: 103 --------NSIQSKNVLSFVVI--MLLLETLLLAVFLVLDVLLFYIFFESILPPLFLLI 151


>sp|Q4ZXC3|CYOE_PSEU2 Protoheme IX farnesyltransferase
OS=Pseudomonas syringae pv. syringae (strain B728a)
GN=cyoE PE=3 SV=1
Length = 295

Score = 30.0 bits (66), Expect = 6.1
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Frame = -2

Query: 268 VLGLSETGNFLDFVMITTLLVFSSLQV-HGFRVLLFIARLVRRSQLPPFGLKIFKSTTSG 92
V+G N DF +T L++FS Q+ H + + +F R +++P +K T
Sbjct: 148 VIGYCAVSNSFDFAALTLLVMFSLWQMPHSYAIAIFRFNDYRAAKIPVLPVKRGILVTKR 207

Query: 91 LILLSVCA 68
I+L + A
Sbjct: 208 HIMLYILA 215


>sp|Q9NZL6|RGL1_HUMAN Ral guanine nucleotide dissociation
stimulator-like 1 OS=Homo sapiens GN=RGL1 PE=1 SV=1
Length = 768

Score = 29.6 bits (65), Expect = 8.0
Identities = 18/69 (26%), Positives = 28/69 (40%)
Frame = +2

Query: 95 TSCALEYFQPKRGQLTPSDQPSNEQKNSKSMHLKRREHQQSCNHYKIQKISCLGETQYNK 274
+SC + + + G +TP D P QK K E SC+ + G +
Sbjct: 557 SSCESNHSEAEEGSITPMDTPDEPQK-------KLSESSSSCSSIHSMDTNSSGMSSLIN 609

Query: 275 NLSNPVASN 301
LS+P + N
Sbjct: 610 PLSSPPSCN 618


>sp|Q4G0P3|HYDIN_HUMAN Hydrocephalus-inducing protein homolog OS=Homo
sapiens GN=HYDIN PE=1 SV=2
Length = 5120

Score = 29.6 bits (65), Expect = 8.0
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +2

Query: 119 QPKRGQLTPSDQPSNEQKNSKSMHLKRREHQ 211
QPK+G LTP+++P+N Q + + EHQ
Sbjct: 3102 QPKKGSLTPTEKPTNVQVFFHAKKEVKIEHQ 3132


tr_hit_id A7QSX7
Definition tr|A7QSX7|A7QSX7_VITVI Chromosome chr14 scaffold_164, whole genome shotgun sequence OS=Vitis vinifera
Align length 135
Score (bit) 82.8
E-value 8.0e-15
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911764|Adiantum capillus-veneris mRNA, clone:
YMU001_000008_H09.
(497 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7QSX7|A7QSX7_VITVI Chromosome chr14 scaffold_164, whole geno... 83 8e-15
tr|A2Q5Z5|A2Q5Z5_MEDTR Putative uncharacterized protein OS=Medic... 68 2e-10
tr|Q9ZU83|Q9ZU83_ARATH Putative uncharacterized protein At2g4806... 52 1e-05
tr|Q0JMK9|Q0JMK9_ORYSJ Os01g0388500 protein OS=Oryza sativa subs... 45 0.001
tr|Q5VMP5|Q5VMP5_ORYSJ Putative uncharacterized protein OSJNBb00... 44 0.004
tr|A5BIX1|A5BIX1_VITVI Putative uncharacterized protein OS=Vitis... 44 0.004
tr|A2ZTG3|A2ZTG3_ORYSJ Putative uncharacterized protein OS=Oryza... 44 0.004
tr|A2WQC6|A2WQC6_ORYSI Putative uncharacterized protein OS=Oryza... 44 0.004
tr|A7PU36|A7PU36_VITVI Chromosome chr7 scaffold_31, whole genome... 42 0.016
tr|A5ADK4|A5ADK4_VITVI Putative uncharacterized protein OS=Vitis... 38 0.30
tr|Q0HY53|Q0HY53_SHESR Putative uncharacterized protein OS=Shewa... 37 0.68
tr|B6GBF9|B6GBF9_9ACTN Putative uncharacterized protein OS=Colli... 36 0.88
tr|Q20XG2|Q20XG2_RHOPB Outer membrane autotransporter barrel OS=... 35 2.0
tr|A0KTN3|A0KTN3_SHESA Putative uncharacterized protein OS=Shewa... 35 2.0
tr|Q0HLR9|Q0HLR9_SHESM Putative uncharacterized protein OS=Shewa... 35 2.6
tr|Q7RPL9|Q7RPL9_PLAYO Putative uncharacterized protein PY01439 ... 34 3.4
tr|A4Y3W9|A4Y3W9_SHEPC Putative uncharacterized protein OS=Shewa... 34 4.4
tr|A1RN23|A1RN23_SHESW Putative uncharacterized protein OS=Shewa... 34 4.4
tr|A2UX35|A2UX35_SHEPU Putative uncharacterized protein OS=Shewa... 34 4.4
tr|Q6BRW6|Q6BRW6_DEBHA DEHA2D13332p OS=Debaryomyces hansenii GN=... 34 4.4
tr|Q8EHX3|Q8EHX3_SHEON Putative uncharacterized protein OS=Shewa... 33 5.7
tr|Q3J9A2|Q3J9A2_NITOC Na+/H+ antiporter NhaC OS=Nitrosococcus o... 33 7.5
tr|B2TKW8|B2TKW8_CLOBB Natural resistance-associated macrophage ... 33 7.5
tr|B6BYN0|B6BYN0_9GAMM Na+/H+ antiporter family OS=Nitrosococcus... 33 7.5
tr|B3NLL0|B3NLL0_DROER GG21827 OS=Drosophila erecta GN=GG21827 P... 33 7.5
tr|A2FU78|A2FU78_TRIVA Dynein heavy chain family protein OS=Tric... 33 7.5
tr|Q6CU39|Q6CU39_KLULA KLLA0C07865p OS=Kluyveromyces lactis GN=K... 33 7.5
tr|Q6MIK2|Q6MIK2_BDEBA Phosphoenolpyruvate synthase OS=Bdellovib... 33 9.8
tr|Q4K400|Q4K400_PSEF5 ABC transporter, permease protein OS=Pseu... 33 9.8
tr|A1AX03|A1AX03_RUTMC ABC-3 protein OS=Ruthia magnifica subsp. ... 33 9.8

>tr|A7QSX7|A7QSX7_VITVI Chromosome chr14 scaffold_164, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00006079001
PE=4 SV=1
Length = 2311

Score = 82.8 bits (203), Expect = 8e-15
Identities = 44/135 (32%), Positives = 77/135 (57%)
Frame = -2

Query: 436 VIFFLAFLLKPDLSTRMRHYVIIFCGTHVAMLYLLRLTLIADQIAIAGNWIRQVLIVLGL 257
+IFF+ LL +S R+R +I+ C H A+LY+L+L LI+ + G+ R++L GL
Sbjct: 373 MIFFMIHLLSHTISRRIRQALIVLCEGHFALLYILQLNLISKALEQKGSLARELLSQSGL 432

Query: 256 SETGNFLDFVMITTLLVFSSLQVHGFRVLLFIARLVRRSQLPPFGLKIFKSTTSGLILLS 77
E ++ DF+ I L F ++ +GF VL + +V+ + PP G + K+ + +LLS
Sbjct: 433 LEGDSYGDFLKIAVLACFCAIHNNGFEVLFSFSAIVQHAPRPPIGFSVLKAGLNKSVLLS 492

Query: 76 VCASSNLDYFYQESN 32
V S++ + + S+
Sbjct: 493 VYTSTSRESQHNNSS 507


>tr|A2Q5Z5|A2Q5Z5_MEDTR Putative uncharacterized protein OS=Medicago
truncatula GN=MtrDRAFT_AC172101g12v1 PE=4 SV=1
Length = 2005

Score = 68.2 bits (165), Expect = 2e-10
Identities = 41/124 (33%), Positives = 68/124 (54%)
Frame = -2

Query: 436 VIFFLAFLLKPDLSTRMRHYVIIFCGTHVAMLYLLRLTLIADQIAIAGNWIRQVLIVLGL 257
+IFFL +LL ++ ++R VI+ C A+ ++L+L LI+ + G++ Q+L GL
Sbjct: 510 MIFFLIYLLSNAINGKLRQAVILLCEAQFALQFILQLDLISKTLDQKGSYAFQILSRFGL 569

Query: 256 SETGNFLDFVMITTLLVFSSLQVHGFRVLLFIARLVRRSQLPPFGLKIFKSTTSGLILLS 77
+ +DF I+ L F ++ HG + LL + +VR + PP G I + +GLI
Sbjct: 570 LNHIHSVDFFKISILACFCAIHNHGLQTLLIFSAIVRHTSCPPVGFGILR---AGLI-KP 625

Query: 76 VCAS 65
VC S
Sbjct: 626 VCLS 629


>tr|Q9ZU83|Q9ZU83_ARATH Putative uncharacterized protein At2g48060
OS=Arabidopsis thaliana GN=At2g48060 PE=2 SV=1
Length = 621

Score = 52.4 bits (124), Expect = 1e-05
Identities = 34/129 (26%), Positives = 58/129 (44%)
Frame = -2

Query: 436 VIFFLAFLLKPDLSTRMRHYVIIFCGTHVAMLYLLRLTLIADQIAIAGNWIRQVLIVLGL 257
VIFFL +LL +++ ++R +I+ C H A+LY+L + L+++ + G+ R+VL L
Sbjct: 513 VIFFLMYLLSHNINRKIRKSLILLCEVHFALLYILEIDLVSNSLKQEGSASREVLFQLA- 571

Query: 256 SETGNFLDFVMITTLLVFSSLQVHGFRVLLFIARLVRRSQLPPFGLKIFKSTTSGLILLS 77
+VR + PP G I K+ + +LLS
Sbjct: 572 ----------------------------------IVRHTPSPPIGFSILKAGLNKSVLLS 597

Query: 76 VCASSNLDY 50
V +S + Y
Sbjct: 598 VYSSPSSSY 606


>tr|Q0JMK9|Q0JMK9_ORYSJ Os01g0388500 protein OS=Oryza sativa subsp.
japonica GN=Os01g0388500 PE=4 SV=1
Length = 2196

Score = 45.4 bits (106), Expect = 0.001
Identities = 29/104 (27%), Positives = 51/104 (49%), Gaps = 1/104 (0%)
Frame = -2

Query: 367 FC-GTHVAMLYLLRLTLIADQIAIAGNWIRQVLIVLGLSETGNFLDFVMITTLLVFSSLQ 191
FC G VA+ L+ ++ G ++ GLS DF+ I +++ F ++
Sbjct: 298 FCLGVFVALCNLVNNSVFVYTTTEGGASSSDDHLIDGLSNKSTTKDFMKIGSIVCFCAVH 357

Query: 190 VHGFRVLLFIARLVRRSQLPPFGLKIFKSTTSGLILLSVCASSN 59
HGF++L ++ ++R + P G I K+ + +LLSV S N
Sbjct: 358 SHGFKMLFALSAVLRHTPSTPVGFTILKAGLNKSVLLSVYNSQN 401


>tr|Q5VMP5|Q5VMP5_ORYSJ Putative uncharacterized protein
OSJNBb0008D07.39 OS=Oryza sativa subsp. japonica
GN=OSJNBb0008D07.39 PE=4 SV=1
Length = 1762

Score = 43.9 bits (102), Expect = 0.004
Identities = 22/68 (32%), Positives = 38/68 (55%)
Frame = -2

Query: 262 GLSETGNFLDFVMITTLLVFSSLQVHGFRVLLFIARLVRRSQLPPFGLKIFKSTTSGLIL 83
GLS DF+ I +++ F ++ HGF++L ++ ++R + P G I K+ + +L
Sbjct: 14 GLSNKSTTKDFMKIGSIVCFCAVHSHGFKMLFALSAVLRHTPSTPVGFTILKAGLNKSVL 73

Query: 82 LSVCASSN 59
LSV S N
Sbjct: 74 LSVYNSQN 81


>tr|A5BIX1|A5BIX1_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_031828 PE=4 SV=1
Length = 1844

Score = 43.9 bits (102), Expect = 0.004
Identities = 23/79 (29%), Positives = 42/79 (53%)
Frame = -2

Query: 268 VLGLSETGNFLDFVMITTLLVFSSLQVHGFRVLLFIARLVRRSQLPPFGLKIFKSTTSGL 89
V L E ++ DF+ I L F ++ +GF VL + +V+ + PP G + K+ +
Sbjct: 100 VYSLLEGDSYGDFLKIAVLACFCAIHNNGFEVLFSFSAIVQHAPRPPIGFSVLKAGLNKS 159

Query: 88 ILLSVCASSNLDYFYQESN 32
+LLSV S++ + + S+
Sbjct: 160 VLLSVYTSTSRESQHNNSS 178


>tr|A2ZTG3|A2ZTG3_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_001835 PE=4 SV=1
Length = 1750

Score = 43.9 bits (102), Expect = 0.004
Identities = 22/68 (32%), Positives = 38/68 (55%)
Frame = -2

Query: 262 GLSETGNFLDFVMITTLLVFSSLQVHGFRVLLFIARLVRRSQLPPFGLKIFKSTTSGLIL 83
GLS DF+ I +++ F ++ HGF++L ++ ++R + P G I K+ + +L
Sbjct: 14 GLSNKSTTKDFMKIGSIVCFCAVHSHGFKMLFALSAVLRHTPSTPVGFTILKAGLNKSVL 73

Query: 82 LSVCASSN 59
LSV S N
Sbjct: 74 LSVYNSQN 81


>tr|A2WQC6|A2WQC6_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_02055 PE=4 SV=1
Length = 739

Score = 43.9 bits (102), Expect = 0.004
Identities = 22/68 (32%), Positives = 38/68 (55%)
Frame = -2

Query: 262 GLSETGNFLDFVMITTLLVFSSLQVHGFRVLLFIARLVRRSQLPPFGLKIFKSTTSGLIL 83
GLS DF+ I +++ F ++ HGF++L ++ ++R + P G I K+ + +L
Sbjct: 14 GLSNKSTTKDFMKIGSIVCFCAVHSHGFKMLFALSAVLRHTPSTPVGFTILKAGLNKSVL 73

Query: 82 LSVCASSN 59
LSV S N
Sbjct: 74 LSVYNSQN 81


>tr|A7PU36|A7PU36_VITVI Chromosome chr7 scaffold_31, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00023643001
PE=4 SV=1
Length = 2413

Score = 42.0 bits (97), Expect = 0.016
Identities = 29/125 (23%), Positives = 54/125 (43%)
Frame = -2

Query: 436 VIFFLAFLLKPDLSTRMRHYVIIFCGTHVAMLYLLRLTLIADQIAIAGNWIRQVLIVLGL 257
++FFL +LL ++S + +I+ C H A+LY+L+L LI+ + G+ ++L +
Sbjct: 508 MVFFLIYLLSHNISRKTCQSLILLCEVHFALLYILQLNLISRTLEEKGSISMEILSQIA- 566

Query: 256 SETGNFLDFVMITTLLVFSSLQVHGFRVLLFIARLVRRSQLPPFGLKIFKSTTSGLILLS 77
+V+ + PP G I K+ + +LLS
Sbjct: 567 ----------------------------------MVQHTPNPPIGFSILKAGLNKSVLLS 592

Query: 76 VCASS 62
+ +SS
Sbjct: 593 IYSSS 597


>tr|A5ADK4|A5ADK4_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_015458 PE=4 SV=1
Length = 2393

Score = 37.7 bits (86), Expect = 0.30
Identities = 22/69 (31%), Positives = 35/69 (50%)
Frame = -2

Query: 268 VLGLSETGNFLDFVMITTLLVFSSLQVHGFRVLLFIARLVRRSQLPPFGLKIFKSTTSGL 89
V L E + D + I L ++ HGF VL + +V+ + PP G I K+ +
Sbjct: 476 VYSLLEHDHSWDSLEIAMLACCCAVHKHGFDVLFSFSAMVQHTPNPPIGFSILKAGLNKS 535

Query: 88 ILLSVCASS 62
+LLS+ +SS
Sbjct: 536 VLLSIYSSS 544