BP911614
Clone id YMU001_000007_B03
Library
Length 538
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000007_B03.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence
TTGTTTCCCCAACAAAATTTCTTTCTATTAACATTGAGATACTTTACAAGATTGTTCTGA
GCCTCAACAATGTGTTGTGGCTTTCCTATAGAACATAGCGAGGAAAGAAGGAGAAGCTTT
CCTTAGGGCTCTCCTCTTATCCAGATAGGGCTCTCGCACTAAGTATATCTACAACCAAGA
TTACCTAAACAAAGCTACCAAATACTCCTCCGCTTTTCAGCTTCTCCATTCTTGCTTGAA
GTCCTGACAATGCTTTGTCTTCAGCAGGATGATGCTCCTCAGTCAAGTGGGATACTGACT
CCGAGCTTGGCTCATCAATCCGTGAAATTGCATTGCGAGCGGACCCAACAGTCCACCCAT
TTGTGTACTGACCCTGACCCCCAGTAGGTGGCTTTCCAGCAGTTGCAGCCTGTATATTTT
TCATTCTTTCTCTGATTGCGTCCAGTGTTCCAGGCATGGGTGCCCCAAAGTTCATTTTCC
CATCACCTCCTACATTTCCTGCACCCTCATATGGTCCCGTAATTGATCTCAGATAATT
■■Homology search results ■■ -
sp_hit_id Q6CHN0
Definition sp|Q6CHN0|SLA1_YARLI Actin cytoskeleton-regulatory complex protein SLA1 OS=Yarrowia lipolytica
Align length 40
Score (bit) 31.6
E-value 2.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911614|Adiantum capillus-veneris mRNA, clone:
YMU001_000007_B03.
(538 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q6CHN0|SLA1_YARLI Actin cytoskeleton-regulatory complex prote... 32 2.6
sp|O53810|PG10_MYCTU Uncharacterized PE-PGRS family protein PE_P... 31 3.4
sp|Q12WC8|METK_METBU S-adenosylmethionine synthetase OS=Methanoc... 31 3.4
sp|P54318|LIPR2_RAT Pancreatic lipase-related protein 2 OS=Rattu... 31 3.4
sp|Q06002|BFSP1_BOVIN Filensin OS=Bos taurus GN=BFSP1 PE=1 SV=2 31 4.4
sp|Q64425|LIPP_MYOCO Pancreatic triacylglycerol lipase (Fragment... 30 7.5
sp|P58003|SESN1_XENLA Sestrin-1 OS=Xenopus laevis GN=sesn1 PE=2 ... 26 9.6
sp|P0C0J8|P46_MYCHJ 46 kDa surface antigen OS=Mycoplasma hyopneu... 30 9.8
sp|P0C0J7|P46_MYCH2 46 kDa surface antigen OS=Mycoplasma hyopneu... 30 9.8
sp|Q9VP05|MED1_DROME Mediator of RNA polymerase II transcription... 30 9.8

>sp|Q6CHN0|SLA1_YARLI Actin cytoskeleton-regulatory complex protein
SLA1 OS=Yarrowia lipolytica GN=SLA1 PE=3 SV=1
Length = 1136

Score = 31.6 bits (70), Expect = 2.6
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = -1

Query: 400 AGKPPTGGQGQYTNGWTVGSARNAISRIDEPSSESVSHLT 281
+G+P +G + G +V +RNA S D+PSS S + T
Sbjct: 215 SGRPSSGAGDSRSRGSSVSRSRNASSANDKPSSSSANFFT 254


>sp|O53810|PG10_MYCTU Uncharacterized PE-PGRS family protein
PE_PGRS10 OS=Mycobacterium tuberculosis GN=PE_PGRS10
PE=3 SV=1
Length = 801

Score = 31.2 bits (69), Expect = 3.4
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Frame = -1

Query: 526 SITGPYEGAGNVGGDGKMNFGAPMPGTLDAIRERMKNIQAATAGKPP----TGGQG 371
S +G + GAG GGD M FG+ G I + + + A AG P GG G
Sbjct: 263 SRSGGFGGAGGAGGDAGMFFGSGGSGGAGGISKSVGDSAAGGAGGAPGLIGNGGNG 318


>sp|Q12WC8|METK_METBU S-adenosylmethionine synthetase
OS=Methanococcoides burtonii (strain DSM 6242) GN=mat
PE=3 SV=1
Length = 401

Score = 31.2 bits (69), Expect = 3.4
Identities = 22/89 (24%), Positives = 38/89 (42%)
Frame = -1

Query: 502 AGNVGGDGKMNFGAPMPGTLDAIRERMKNIQAATAGKPPTGGQGQYTNGWTVGSARNAIS 323
+ +G DG + G G + R AT+GK P G+ N + AR+ +S
Sbjct: 274 SAEMGDDGSVGRGNRSNGLITPSRPMSME---ATSGKNPINHIGKIYNLLSTQMARDVVS 330

Query: 322 RIDEPSSESVSHLTEEHHPAEDKALSGLQ 236
+DE S + L++ P + ++ Q
Sbjct: 331 AVDEVSDVHIKLLSQIGMPIDQPLVASAQ 359


>sp|P54318|LIPR2_RAT Pancreatic lipase-related protein 2 OS=Rattus
norvegicus GN=Pnliprp2 PE=1 SV=1
Length = 468

Score = 31.2 bits (69), Expect = 3.4
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +2

Query: 374 LTPSRWLSSSCSLYIFHSFSDCVQCSRHGCPKV 472
L P +L CS Y +DC C GCPK+
Sbjct: 293 LNPDGFLGYPCSSYEKFQQNDCFPCPEEGCPKM 325


>sp|Q06002|BFSP1_BOVIN Filensin OS=Bos taurus GN=BFSP1 PE=1 SV=2
Length = 756

Score = 30.8 bits (68), Expect = 4.4
Identities = 27/97 (27%), Positives = 35/97 (36%), Gaps = 4/97 (4%)
Frame = -1

Query: 532 LRSITGPYEGAGNVG---GDGKMNFGAPMPGTLDAIRERMKNIQAATAGKPPTG-GQGQY 365
L+ GP EG G GD G P G D ++E G PP G G G
Sbjct: 533 LKEEGGPPEGKGEPPEGKGDSVKEEGGPPEGKGDGVKEE---------GGPPEGKGDGVK 583

Query: 364 TNGWTVGSARNAISRIDEPSSESVSHLTEEHHPAEDK 254
G + + + EP L EE P ++K
Sbjct: 584 EEGGPPEGKGDGVKKEGEPPEGKGEGLKEEEGPLQEK 620


>sp|Q64425|LIPP_MYOCO Pancreatic triacylglycerol lipase (Fragment)
OS=Myocastor coypus GN=PNLIP PE=2 SV=1
Length = 457

Score = 30.0 bits (66), Expect = 7.5
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +2

Query: 374 LTPSRWLSSSCSLYIFHSFSDCVQCSRHGCPKV 472
L P+ + SCS Y S ++C C+ GCP++
Sbjct: 284 LNPTGFAGFSCSSYNTFSSNNCFPCASGGCPQM 316


>sp|P58003|SESN1_XENLA Sestrin-1 OS=Xenopus laevis GN=sesn1 PE=2
SV=1
Length = 481

Score = 26.2 bits (56), Expect(2) = 9.6
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = -2

Query: 417 IYRLQLLESHLLGVRVSTQMGGLLGPLAMQFHGLMSQARSQ 295
++ Q LES L QM G L P + G+M+ +R Q
Sbjct: 81 VFHPQYLESFLKTQHYLLQMDGPLSPCYQHYIGIMAASRHQ 121



Score = 22.3 bits (46), Expect(2) = 9.6
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -1

Query: 274 HHPAEDKALSGLQARMEKLKSGG 206
HH + K L+GL+ +KL++ G
Sbjct: 135 HHGGDQKWLNGLENAPQKLRNLG 157


>sp|P0C0J8|P46_MYCHJ 46 kDa surface antigen OS=Mycoplasma
hyopneumoniae (strain J / ATCC 25934 / NCTC 10110)
GN=p46 PE=1 SV=1
Length = 416

Score = 29.6 bits (65), Expect = 9.8
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -1

Query: 451 GTLDAIRERMKNIQAATAGKPPTGGQGQYTNGWTVGSARNAI 326
G + ++E MKN Q P G Y GW G+A I
Sbjct: 219 GAMKVLKELMKNSQNKIIDLSPEGENAVYVPGWNYGTAGQRI 260


>sp|P0C0J7|P46_MYCH2 46 kDa surface antigen OS=Mycoplasma
hyopneumoniae (strain 232) GN=p46 PE=4 SV=1
Length = 416

Score = 29.6 bits (65), Expect = 9.8
Identities = 14/42 (33%), Positives = 18/42 (42%)
Frame = -1

Query: 451 GTLDAIRERMKNIQAATAGKPPTGGQGQYTNGWTVGSARNAI 326
G + ++E MKN Q P G Y GW G+A I
Sbjct: 219 GAMKVLKELMKNSQNKIIDLSPEGENAVYVPGWNYGTAGQRI 260


>sp|Q9VP05|MED1_DROME Mediator of RNA polymerase II transcription
subunit 1 OS=Drosophila melanogaster GN=MED1 PE=1 SV=2
Length = 1475

Score = 29.6 bits (65), Expect = 9.8
Identities = 26/113 (23%), Positives = 41/113 (36%), Gaps = 5/113 (4%)
Frame = -1

Query: 532 LRSITGPYEGAGNVGGDGKMNFGAPMPGTLDAIRERMKNIQAATAGKPPTGGQGQYTNGW 353
L GP G+G +GG G M+ G P+ G + + + + G P GG N
Sbjct: 527 LHGAIGPGSGSGAIGGGG-MSGGGPVSGVGNNFSQFSMDTPTPSDGSLPGGGFANINNLK 585

Query: 352 TVGSARNAISRIDEPSSESVS-----HLTEEHHPAEDKALSGLQARMEKLKSG 209
+R+ +S + + +L E P + SG SG
Sbjct: 586 MDAKSRSLADAFAASTSAAAAIAGLINLKRETDPQSGSSASGTTVSGSSSSSG 638


tr_hit_id A7QYQ0
Definition tr|A7QYQ0|A7QYQ0_VITVI Chromosome undetermined scaffold_252, whole genome shotgun sequence OS=Vitis vinifera
Align length 87
Score (bit) 62.8
E-value 1.0e-08
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911614|Adiantum capillus-veneris mRNA, clone:
YMU001_000007_B03.
(538 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|A7QYQ0|A7QYQ0_VITVI Chromosome undetermined scaffold_252, who... 63 1e-08
tr|A9SCU9|A9SCU9_PHYPA Predicted protein OS=Physcomitrella paten... 60 6e-08
tr|Q5N749|Q5N749_ORYSJ Putative microtubule bundling polypeptide... 57 5e-07
tr|B8ABA5|B8ABA5_ORYSI Putative uncharacterized protein OS=Oryza... 57 5e-07
tr|A2ZYZ0|A2ZYZ0_ORYSJ Putative uncharacterized protein OS=Oryza... 57 5e-07
tr|Q8S912|Q8S912_TOBAC Microtubule bundling polypeptide TMBP200 ... 56 1e-06
tr|B8A3F8|B8A3F8_MAIZE Putative uncharacterized protein OS=Zea m... 55 2e-06
tr|Q9ZQN6|Q9ZQN6_ARATH Similar to ch-TOG protein from Homo sapie... 53 1e-05
tr|Q94FN2|Q94FN2_ARATH Microtubule organization 1 protein (MOR1/... 53 1e-05
tr|Q56XA7|Q56XA7_ARATH Similar to ch-TOG protein from Homo sapie... 53 1e-05
tr|Q0G0K8|Q0G0K8_9RHIZ UvrABC system protein B OS=Fulvimarina pe... 42 0.016
tr|A6W3B5|A6W3B5_MARMS RNA polymerase, sigma-24 subunit, ECF sub... 35 2.5
tr|Q6M942|Q6M942_NEUCR Related to PEST phosphatase interacting p... 35 3.3
tr|A7UWG5|A7UWG5_NEUCR Putative uncharacterized protein OS=Neuro... 35 3.3
tr|A7S350|A7S350_NEMVE Predicted protein OS=Nematostella vectens... 34 4.3
tr|Q2RN30|Q2RN30_RHORT Protein translocase subunit secD / protei... 34 5.6

>tr|A7QYQ0|A7QYQ0_VITVI Chromosome undetermined scaffold_252, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00010282001 PE=4 SV=1
Length = 425

Score = 62.8 bits (151), Expect = 1e-08
Identities = 41/87 (47%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
Frame = -1

Query: 451 GTLDAIRERMKNIQAATAGKPPTGGQG--QYTNGWTVGSARNAISRIDEPSSESVSHLTE 278
GTLDAIRERMK+IQ ATAG G Y NG G + S++ S +V+
Sbjct: 339 GTLDAIRERMKSIQLATAGGNHDSGNRPLMYVNG---GLSHGIASQLTHASDRAVAENPV 395

Query: 277 EHH--PAEDKALSGLQARMEKLKSGGV 203
+ P ++KALSGLQARME+LKSG +
Sbjct: 396 QGGVLPMDEKALSGLQARMERLKSGTI 422


>tr|A9SCU9|A9SCU9_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_106216 PE=4 SV=1
Length = 1974

Score = 60.5 bits (145), Expect = 6e-08
Identities = 38/82 (46%), Positives = 45/82 (54%)
Frame = -1

Query: 451 GTLDAIRERMKNIQAATAGKPPTGGQGQYTNGWTVGSARNAISRIDEPSSESVSHLTEEH 272
GTLDAIRERMK+IQA AG T +NG S S+S +
Sbjct: 1906 GTLDAIRERMKSIQAGAAGTTVTHSTNFSSNG-----------------SVSLSRTSSSG 1948

Query: 271 HPAEDKALSGLQARMEKLKSGG 206
ED+ALSGLQARME+LK+GG
Sbjct: 1949 EIVEDRALSGLQARMERLKAGG 1970


>tr|Q5N749|Q5N749_ORYSJ Putative microtubule bundling polypeptide
TMBP200 (Os01g0816400 protein) OS=Oryza sativa subsp.
japonica GN=OSJNBa0085D07.49-1 PE=4 SV=1
Length = 1997

Score = 57.4 bits (137), Expect = 5e-07
Identities = 36/84 (42%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Frame = -1

Query: 451 GTLDAIRERMKNIQAATAGKPPTGGQGQYTNGWTVGSARNAISRID-EPSSESVSHLTEE 275
GTLDA+RERMK+IQAA G G Q + G+ + +R+D +P ++++
Sbjct: 1918 GTLDALRERMKSIQAAAVGANFDGVQARPLPSMN-GNTLHGGTRLDADPQTQNIIP---- 1972

Query: 274 HHPAEDKALSGLQARMEKLKSGGV 203
P +++ALSGLQARME+LKSG +
Sbjct: 1973 --PMDERALSGLQARMERLKSGSM 1994


>tr|B8ABA5|B8ABA5_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_04204 PE=4 SV=1
Length = 1941

Score = 57.4 bits (137), Expect = 5e-07
Identities = 36/84 (42%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Frame = -1

Query: 451 GTLDAIRERMKNIQAATAGKPPTGGQGQYTNGWTVGSARNAISRID-EPSSESVSHLTEE 275
GTLDA+RERMK+IQAA G G Q + G+ + +R+D +P ++++
Sbjct: 1862 GTLDALRERMKSIQAAAVGANFDGVQARPLPSMN-GNTLHGGTRLDADPQTQNIIP---- 1916

Query: 274 HHPAEDKALSGLQARMEKLKSGGV 203
P +++ALSGLQARME+LKSG +
Sbjct: 1917 --PMDERALSGLQARMERLKSGSM 1938


>tr|A2ZYZ0|A2ZYZ0_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_003762 PE=4 SV=1
Length = 1966

Score = 57.4 bits (137), Expect = 5e-07
Identities = 36/84 (42%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Frame = -1

Query: 451 GTLDAIRERMKNIQAATAGKPPTGGQGQYTNGWTVGSARNAISRID-EPSSESVSHLTEE 275
GTLDA+RERMK+IQAA G G Q + G+ + +R+D +P ++++
Sbjct: 1887 GTLDALRERMKSIQAAAVGANFDGVQARPLPSMN-GNTLHGGTRLDADPQTQNIIP---- 1941

Query: 274 HHPAEDKALSGLQARMEKLKSGGV 203
P +++ALSGLQARME+LKSG +
Sbjct: 1942 --PMDERALSGLQARMERLKSGSM 1963


>tr|Q8S912|Q8S912_TOBAC Microtubule bundling polypeptide TMBP200
OS=Nicotiana tabacum PE=2 SV=1
Length = 2029

Score = 55.8 bits (133), Expect = 1e-06
Identities = 36/90 (40%), Positives = 51/90 (56%), Gaps = 7/90 (7%)
Frame = -1

Query: 451 GTLDAIRERMKNIQ-AATAGKPPTGGQGQYTNGWTVGSARNAISRIDEPSSESVSHLTEE 275
GTL+AIRERMK++ AAT G P + T+ S +S + + + H + E
Sbjct: 1945 GTLEAIRERMKSMSLAATGGNPDPSSR-------TLMSMNGNVSHMVSTQAPGIEHSSIE 1997

Query: 274 HH------PAEDKALSGLQARMEKLKSGGV 203
+ P ++KALSGLQARME+LKSG +
Sbjct: 1998 NSIQSGVLPMDEKALSGLQARMERLKSGSM 2027


>tr|B8A3F8|B8A3F8_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 467

Score = 55.5 bits (132), Expect = 2e-06
Identities = 41/107 (38%), Positives = 56/107 (52%), Gaps = 1/107 (0%)
Frame = -1

Query: 520 TGPYEGAGNVGGDGKMNFGAPMPGTLDAIRERMKNIQAATAGKPPTGGQGQYTNGWTVGS 341
T P+ G G + + GTLDA+RERMK+IQAA G G Q + +
Sbjct: 367 TQPFRGQGAITDQQTDRYHTS--GTLDALRERMKSIQAAAIGHFD-GAQARPLASMNGSN 423

Query: 340 ARNAISRID-EPSSESVSHLTEEHHPAEDKALSGLQARMEKLKSGGV 203
+ +R+D EP S P +++ALSGLQARME+LKSG +
Sbjct: 424 MVHGGTRLDGEPQQRS------NIPPMDERALSGLQARMERLKSGSM 464


>tr|Q9ZQN6|Q9ZQN6_ARATH Similar to ch-TOG protein from Homo sapiens
OS=Arabidopsis thaliana GN=At2g35630 PE=2 SV=2
Length = 1611

Score = 52.8 bits (125), Expect = 1e-05
Identities = 39/94 (41%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Frame = -1

Query: 475 MNFGAPMPGTLDAIRERMKNIQAATAGKPPTGGQGQYTNGWTVGSARNAISRIDEPSSES 296
MN G M GTLDAIRERMKN+Q A++ P TN ++++ P S+
Sbjct: 1524 MNPGV-MTGTLDAIRERMKNMQLASS--EPVSKPLMPTND------NLSMNQQSVPPSQM 1574

Query: 295 VSHLTEEHH---PAEDKALSGLQARMEKLKSGGV 203
H P ++KALSGLQARME+LK G +
Sbjct: 1575 GQETVHTHPVVLPMDEKALSGLQARMERLKGGSL 1608


>tr|Q94FN2|Q94FN2_ARATH Microtubule organization 1 protein (MOR1/GEM1)
OS=Arabidopsis thaliana GN=At2g35630 PE=2 SV=1
Length = 1978

Score = 52.8 bits (125), Expect = 1e-05
Identities = 39/94 (41%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Frame = -1

Query: 475 MNFGAPMPGTLDAIRERMKNIQAATAGKPPTGGQGQYTNGWTVGSARNAISRIDEPSSES 296
MN G M GTLDAIRERMKN+Q A++ P TN ++++ P S+
Sbjct: 1891 MNPGV-MTGTLDAIRERMKNMQLASS--EPVSKPLMPTND------NLSMNQQSVPPSQM 1941

Query: 295 VSHLTEEHH---PAEDKALSGLQARMEKLKSGGV 203
H P ++KALSGLQARME+LK G +
Sbjct: 1942 GQETVHTHPVVLPMDEKALSGLQARMERLKGGSL 1975


>tr|Q56XA7|Q56XA7_ARATH Similar to ch-TOG protein from Homo sapiens
OS=Arabidopsis thaliana GN=At2g35630 PE=2 SV=1
Length = 434

Score = 52.8 bits (125), Expect = 1e-05
Identities = 39/94 (41%), Positives = 51/94 (54%), Gaps = 3/94 (3%)
Frame = -1

Query: 475 MNFGAPMPGTLDAIRERMKNIQAATAGKPPTGGQGQYTNGWTVGSARNAISRIDEPSSES 296
MN G M GTLDAIRERMKN+Q A++ P TN ++++ P S+
Sbjct: 347 MNPGV-MTGTLDAIRERMKNMQLASS--EPVSKPLMPTND------NLSMNQQSVPPSQM 397

Query: 295 VSHLTEEHH---PAEDKALSGLQARMEKLKSGGV 203
H P ++KALSGLQARME+LK G +
Sbjct: 398 GQETVHTHPVVLPMDEKALSGLQARMERLKGGSL 431