BP911573
Clone id YMU001_000006_E09
Library
Length 542
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000006_E09.
Accession
Tissue type prothallium
Developmental stage -
Contig ID -
Sequence
AGATTCGTCGAGCTAGAAGGAGATGCAGGATATCCAGGCTTTAAAAGTGAACGACGGCAG
AGAGCGAGCGCAACTCTGGCTTCACAGCGCGACAATGGACAAGGACGACAATCATATTAC
TAGAAGAAAGCTGAGCGAGCAACAAATTTAGTAGTGGGAATGCGACAACAAAGCAACGAA
AGTGCAGCATTGCTCCTGGTAGCATAAATGTGACAAAGAACTAGAGTGTTTACTTAGTTG
CAGAAGTATGAATTAGTTGCCTATACATGACAGGAGATTAATCCTCAGTTGGCGAACAAC
AAGAGGCTTCTGTCGTTGATTTTTCTAAAAGGATATCAGTGTGTGTCCAATTGGCATCTG
CAGCAACCAATTGAGATCTCTATCAAATGGCACTTGTAGGAACATGCAGGCTAAGGCATT
TACCCTTAGTGGATTTCATATGATGGGTATAGAGGAACAGAATGACCTTCGAGTCAGCCA
GTGTGGCACAGCCTGTGACCAATCATATACTGGCAATTTACTGAATGTGAGCAGCGATAT
GC
■■Homology search results ■■ -
sp_hit_id Q9NJ15
Definition sp|Q9NJ15|PCSK5_BRACL Proprotein convertase subtilisin/kexin type 5 OS=Branchiostoma californiensis
Align length 61
Score (bit) 32.0
E-value 2.0
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911573|Adiantum capillus-veneris mRNA, clone:
YMU001_000006_E09.
(542 letters)

Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

sp|Q9NJ15|PCSK5_BRACL Proprotein convertase subtilisin/kexin typ... 32 2.0

>sp|Q9NJ15|PCSK5_BRACL Proprotein convertase subtilisin/kexin type 5
OS=Branchiostoma californiensis GN=PC6 PE=2 SV=1
Length = 1696

Score = 32.0 bits (71), Expect = 2.0
Identities = 16/61 (26%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
Frame = +2

Query: 344 CPIGICSNQLRSLSNGTCRNMQAKAFTLSG---FHMMGIEEQNDLRVSQCGTACDQSYTG 514
C G + + +N C+ + FT SG FH + + + L S C + C + G
Sbjct: 1098 CSTGCPNRYYKDDTNKECKPCDSSCFTCSGPASFHCLSCADGDFLHESSCRSTCPAGFIG 1157

Query: 515 N 517
N
Sbjct: 1158 N 1158


tr_hit_id B8LFJ1
Definition tr|B8LFJ1|B8LFJ1_9TELE Cellular myelocytomatosis oncogene (Fragment) OS=Pseudobrama simoni
Align length 39
Score (bit) 28.5
E-value 1.6
Report
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.

Query= BP911573|Adiantum capillus-veneris mRNA, clone:
YMU001_000006_E09.
(542 letters)

Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



Score E
Sequences producing significant alignments: (bits) Value

tr|B8LFJ1|B8LFJ1_9TELE Cellular myelocytomatosis oncogene (Fragm... 28 1.6

>tr|B8LFJ1|B8LFJ1_9TELE Cellular myelocytomatosis oncogene
(Fragment) OS=Pseudobrama simoni GN=c-myc PE=4 SV=1
Length = 397

Score = 28.5 bits (62), Expect(2) = 1.6
Identities = 13/39 (33%), Positives = 24/39 (61%), Gaps = 1/39 (2%)
Frame = +1

Query: 283 PQLANNKRLLSLIFLK-GYQCVSNWHLQQPIEISIKWHL 396
P++ANN++ ++ LK +C+ + HL + +SIK L
Sbjct: 347 PEVANNEKAAKVVILKKATECIHSMHLDEQRLLSIKEQL 385



Score = 25.8 bits (55), Expect(2) = 1.6
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = +3

Query: 120 LEES*ASNKFSSGNATTKQRKCS 188
LE S ++N SS N KQRKCS
Sbjct: 286 LEASSSNNNNSSSNRHGKQRKCS 308