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NBDC - LSDB Archive
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BP911481
Clone id YMU001_000005_D12
Library
Length 571
Definition Adiantum capillus-veneris mRNA. clone: YMU001_000005_D12.
Accession
Tissue type prothallium
Developmental stage -
Contig ID
Sequence 
CCTTTTTCTATCTTACTCTTGGAATCAATTCCCTGCTGATTTGATTCTTCCCGTGCTGCT
TGAGACAAGTCCAGAGGGGGGATCTCCGTTCCCATGTCTGGCAAAGACCGCCCCTCATCC
CCTGCTTTTGTCATATCACGTTCCCTGGCCTCCAATGCATCAAGCTCCTTTGTCTCAGGT
ACATCATCAGCATTTCCAGTTTTCTGTTCATCTGGCTTCTCTGCTCCTGAGACATCGGTC
TGCCCTGCTGCTTCTGACGCGCCAAGCAAAGGAGCGCTTGGTAAAGTCTCTGTACCTGGA
TCTGCTTTGAATGGGTAAGTACTTGACATTTCGAGTACCTCCTTTCCTGTCCCTTGTGAA
GGTATTTCTGTTTGGACTGGGTCAGTACTTGACATTTCAACTACCTGCTTTTCTGTCCCC
TCTGGCTTTATGTCTGCAGTGAAAACCTGTATTTGCGTCCCTAAAAGGGATATTGGGAAA
TGTTTATCTGTGCCTTCCATAGAAGTTCCTAAAGAAGGAGCTCGTTCCTCGAGCTGTTCT
TTGCATACTCCTACTGCTTTCCTGGACTCTC
■■Homology search results ■■ -
sp_hit_id Q13428
Definition sp|Q13428|TCOF_HUMAN Treacle protein OS=Homo sapiens
Align length 178
Score (bit) 39.3
E-value 0.014
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911481|Adiantum capillus-veneris mRNA, clone:
YMU001_000005_D12.
         (571 letters)

Database: uniprot_sprot.fasta 
           412,525 sequences; 148,809,765 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q13428|TCOF_HUMAN Treacle protein OS=Homo sapiens GN=TCOF1 PE...    39   0.014
sp|P19334|TRP_DROME Transient receptor potential protein OS=Dros...    39   0.018
sp|P17691|NEUM_CARAU Neuromodulin OS=Carassius auratus GN=gap43 ...    39   0.024
sp|P31568|YCF2_OENPI Protein ycf2 (Fragment) OS=Oenothera picens...    37   0.090
sp|P49321|NASP_HUMAN Nuclear autoantigenic sperm protein OS=Homo...    36   0.15 
sp|P31569|YCF2_OENVI Protein ycf2 (Fragment) OS=Oenothera villar...    35   0.26 
sp|Q54UW4|Y0777_DICDI Bromodomain-containing protein DDB_G028077...    35   0.35 
sp|B0Z587|YCF2_OENGL Protein ycf2 OS=Oenothera glazioviana GN=yc...    34   0.45 
sp|Q14524|SCN5A_HUMAN Sodium channel protein type 5 subunit alph...    34   0.45 
sp|Q28062|PGCB_BOVIN Brevican core protein OS=Bos taurus GN=BCAN...    34   0.45 
sp|Q6DG03|DMTF1_DANRE Cyclin-D-binding myb-like transcription fa...    34   0.58 
sp|B0Z4R9|YCF2_OENAR Protein ycf2 OS=Oenothera argillicola GN=yc...    33   0.99 
sp|Q86X53|ERIC1_HUMAN Glutamate-rich protein 1 OS=Homo sapiens G...    33   0.99 
sp|P48997|INVO_MOUSE Involucrin OS=Mus musculus GN=Ivl PE=1 SV=1       33   1.0  
sp|O95359|TACC2_HUMAN Transforming acidic coiled-coil-containing...    33   1.3  
sp|Q8WXI7|MUC16_HUMAN Mucin-16 OS=Homo sapiens GN=MUC16 PE=1 SV=2      33   1.3  
sp|Q60432|HYOU1_CRIGR Hypoxia up-regulated protein 1 OS=Cricetul...    33   1.3  
sp|Q2T9N0|FSCB_BOVIN Fibrous sheath CABYR-binding protein OS=Bos...    33   1.3  
sp|P34616|CADH3_CAEEL Cadherin-3 OS=Caenorhabditis elegans GN=cd...    33   1.3  
sp|P07754|ADH3_EMENI Alcohol dehydrogenase 3 OS=Emericella nidul...    33   1.3  
sp|Q86AF2|Y6864_DICDI Putative uncharacterized protein DDB_G0271...    33   1.3  
sp|Q9MEF2|YCF2_OENEH Protein ycf2 OS=Oenothera elata subsp. hook...    32   1.7  
sp|Q8WZ42|TITIN_HUMAN Titin OS=Homo sapiens GN=TTN PE=1 SV=2           32   1.7  
sp|P97881|MUC13_RAT Mucin-13 OS=Rattus norvegicus GN=Muc13 PE=2 ...    32   1.7  
sp|Q6PGL7|FAM21_MOUSE Protein FAM21 OS=Mus musculus GN=Fam21 PE=...    32   1.7  
sp|P14922|CYC8_YEAST General transcriptional corepressor CYC8 OS...    32   1.7  
sp|Q92994|TF3B_HUMAN Transcription factor IIIB 90 kDa subunit OS...    32   2.2  
sp|Q8K201|KCT2_MOUSE Keratinocytes-associated transmembrane prot...    32   2.2  
sp|Q9P6S0|YJP1_SCHPO Putative cell agglutination protein 1742.01...    32   2.9  
sp|Q69YN4|VIR_HUMAN Protein virilizer homolog OS=Homo sapiens GN...    32   2.9  

>sp|Q13428|TCOF_HUMAN Treacle protein OS=Homo sapiens GN=TCOF1 PE=1
           SV=2
          Length = 1488

 Score = 39.3 bits (90), Expect = 0.014
 Identities = 44/178 (24%), Positives = 64/178 (35%), Gaps = 24/178 (13%)
 Frame = -3

Query: 467 LLGTQIQVFTADIKPEGTEKQVVEMSSTDPVQTEIPSQGTGKEVLE-MSSTYPFK-ADPG 294
           L  T   V  AD+     EK   E          +P   TGK V   +S   P K A+P 
Sbjct: 105 LASTNSSVLGADLPSSMKEKAKAETEKAGKTGNSMPHPATGKTVANLLSGKSPRKSAEPS 164

Query: 293 --------TETLPSAPLLGASEAAGQTDVSGAEKPDEQKTGNADDV---------PETKE 165
                   TE   S P  GA+   G      A+   E  + ++D+          P   +
Sbjct: 165 ANTTLVSETEEEGSVPAFGAAAKPGMVSAGQADSSSEDTSSSSDETDVEGKPSVKPAQVK 224

Query: 164 LDALEARERDMTKA----GDEGRSLPDM-GTEIPPLDLSQAAREESNQQGIDSKSKIE 6
             ++  +E    KA    G  G   P + G  +PP   ++   EES      S+S+ E
Sbjct: 225 ASSVSTKESPARKAAPAPGKVGDVTPQVKGGALPPAKRAKKPEEESESSEEGSESEEE 282


>sp|P19334|TRP_DROME Transient receptor potential protein
            OS=Drosophila melanogaster GN=trp PE=1 SV=3
          Length = 1275

 Score = 38.9 bits (89), Expect = 0.018
 Identities = 39/148 (26%), Positives = 61/148 (41%), Gaps = 9/148 (6%)
 Frame = -3

Query: 428  KPEGTEKQVVEMSSTDPVQTEIPSQGTGKEVLEMSSTYPFKADPGTETLPSAPLLGASEA 249
            KPE   K+  E SS         + G  K     + + P  A P ++  P A   GA EA
Sbjct: 1083 KPEAAAKK--EESSKTEASKPAATNGAAKSA---APSAPSDAKPDSKLKPGAA--GAPEA 1135

Query: 248  AGQTDVSGAEKPDEQKTG-------NADDVP--ETKELDALEARERDMTKAGDEGRSLPD 96
               T+  GA KPDE+K+G         D  P  + K+ D     ++D     D+ +   D
Sbjct: 1136 TKATN--GASKPDEKKSGPEEPKKAAGDSKPGDDAKDKDKKPGDDKDKKPGDDKDKKPAD 1193

Query: 95   MGTEIPPLDLSQAAREESNQQGIDSKSK 12
               + P  D  +   ++ +++  D K K
Sbjct: 1194 NNDKKPADDKDKKPGDDKDKKPGDDKDK 1221


>sp|P17691|NEUM_CARAU Neuromodulin OS=Carassius auratus GN=gap43
           PE=2 SV=1
          Length = 213

 Score = 38.5 bits (88), Expect = 0.024
 Identities = 32/147 (21%), Positives = 59/147 (40%), Gaps = 1/147 (0%)
 Frame = -3

Query: 440 TADIKPEGTEKQVVEMSSTDPVQTEIPSQGTGKEVLEMSSTYPFKADPGTETLPSAPLLG 261
           TA  +   TE++   +S ++    E+ ++   +         P    P T    SAP   
Sbjct: 63  TAPDESAETEEKEERVSPSEEKPVEVSTETAEESKPAEQPNSPAAEAPPTAATDSAPSDT 122

Query: 260 ASEAAGQTDVSGAEKPDE-QKTGNADDVPETKELDALEARERDMTKAGDEGRSLPDMGTE 84
            ++   Q  +  AE+P E + T  ADD+   KE +  E  E +  +   +   +PD   +
Sbjct: 123 PTKEEAQEQLQDAEEPKETENTAAADDITTQKEEEKEEEEEEEEEEEEAKRADVPD---D 179

Query: 83  IPPLDLSQAAREESNQQGIDSKSKIEK 3
            P    SQ   +   ++ +D     E+
Sbjct: 180 TPAATESQETDQTDKKEALDDSKPAEE 206


>sp|P31568|YCF2_OENPI Protein ycf2 (Fragment) OS=Oenothera picensis
           GN=ycf2 PE=3 SV=1
          Length = 721

 Score = 36.6 bits (83), Expect = 0.090
 Identities = 42/180 (23%), Positives = 76/180 (42%), Gaps = 15/180 (8%)
 Frame = -3

Query: 500 MEGTDKHFPISLLGTQIQVFTADIKPEGTEKQVVEMSSTDPVQTEIPSQGTGKEVLEMSS 321
           +EGT++       GT+ +V   + + EGTE + VE +  +   TE   +GT +EV     
Sbjct: 186 VEGTEEEVE----GTEEEVEGTEEEVEGTEDEEVEGTEEEVEGTEEEVEGTEEEVEGTEE 241

Query: 320 TYPFKADPGTETLPSAPLLGASEAAGQT--DVSGAEK------------PDEQKTGNADD 183
                 D   E      + G  E    T  +V G E+             DE+  G  ++
Sbjct: 242 EVEGTEDEEVEGTEDEEVEGTEEEVEGTEEEVEGTEEEVEGTEEEVEGTEDEEVEGTEEE 301

Query: 182 VPET-KELDALEARERDMTKAGDEGRSLPDMGTEIPPLDLSQAAREESNQQGIDSKSKIE 6
           V  T +E++  E  E + T+   EG      GTE   ++ ++   E + ++   ++ ++E
Sbjct: 302 VEGTEEEVEGTEDEEVEGTEEEVEGTEEEVEGTEDEEVEGTEEEVEGTEEEVEGTEEEVE 361


>sp|P49321|NASP_HUMAN Nuclear autoantigenic sperm protein OS=Homo
           sapiens GN=NASP PE=1 SV=2
          Length = 788

 Score = 35.8 bits (81), Expect = 0.15
 Identities = 40/167 (23%), Positives = 70/167 (41%), Gaps = 21/167 (12%)
 Frame = -3

Query: 440 TADIKPEGTEKQVVEMSSTDPVQTEIPSQGTGKEVLEMSSTYPFKADPGTETLPSAPLLG 261
           T D   E +E+     +   P + E+ S   GK   E+      K+  GT+        G
Sbjct: 202 TLDWLTETSEEAKGGAAPEGPNEAEVTS---GKPEQEVPDAEEEKSVSGTDVQEECREKG 258

Query: 260 ASEAAGQTDVSGAEKPDE----------QKTGNADDV------PETKELD--ALEARERD 135
             E  G+  VS  EKP E          +K G A +V      P  K +D    E  E+ 
Sbjct: 259 GQEKQGEVIVSIEEKPKEVSEEQPVVTLEKQGTAVEVEAESLDPTVKPVDVGGDEPEEKV 318

Query: 134 MTKAGDEGRSLPD--MGTEIPPLDLS-QAAREESNQQGIDSKSKIEK 3
           +T   + G+++ +  +G E+PP + S +   E +    +++ S++ +
Sbjct: 319 VTSENEAGKAVLEQLVGQEVPPAEESPEVTTEAAEASAVEAGSEVSE 365


>sp|P31569|YCF2_OENVI Protein ycf2 (Fragment) OS=Oenothera
           villaricae GN=ycf2 PE=3 SV=1
          Length = 630

 Score = 35.0 bits (79), Expect = 0.26
 Identities = 39/149 (26%), Positives = 60/149 (40%)
 Frame = -3

Query: 530 EERAPSLGTSMEGTDKHFPISLLGTQIQVFTADIKPEGTEKQVVEMSSTDPVQTEIPSQG 351
           EE        +EGT++       GT+ +V   + + EGTE + VE +  +   TE   +G
Sbjct: 183 EEEVEGTEEEVEGTEEEVE----GTEEEVEGTEEEVEGTEDEEVEGTEEEVEGTEEEVEG 238

Query: 350 TGKEVLEMSSTYPFKADPGTETLPSAPLLGASEAAGQTDVSGAEKPDEQKTGNADDVPET 171
           T +EV             GTE      + G  E    T+    E  +E+  G  ++V  T
Sbjct: 239 TEEEV------------EGTE----EEVEGTEEEVEGTEDEEVEGTEEEVEGTEEEVEGT 282

Query: 170 KELDALEARERDMTKAGDEGRSLPDMGTE 84
           +E       E + T+   EG      GTE
Sbjct: 283 EEEVEGTEEEVEGTEEEVEGTEEEVEGTE 311


>sp|Q54UW4|Y0777_DICDI Bromodomain-containing protein DDB_G0280777
            OS=Dictyostelium discoideum GN=DDB_G0280777 PE=4 SV=1
          Length = 1823

 Score = 34.7 bits (78), Expect = 0.35
 Identities = 21/86 (24%), Positives = 45/86 (52%)
 Frame = -1

Query: 424  QRGQKSR*LKCQVLTQSKQKYLHKGQERRYSKCQVLTHSKQIQVQRLYQALLCLARQKQQ 245
            Q+ Q+ +  + Q   Q +Q+   + Q+++  + Q L H +Q+Q+Q+  Q  L   +Q+QQ
Sbjct: 1503 QQLQQQQLFQQQQQQQQQQQQQQQQQQQQQQQQQQLLHPQQMQIQQNLQQPLQQIQQQQQ 1562

Query: 244  GRPMSQEQRSQMNRKLEMLMMYLRQR 167
             +   Q+Q  Q  ++ +      +Q+
Sbjct: 1563 IQQQQQQQLQQQQQQQQQQQQQQQQQ 1588



 Score = 33.1 bits (74), Expect = 1.0
 Identities = 19/77 (24%), Positives = 41/77 (53%)
 Frame = -1

Query: 391  QVLTQSKQKYLHKGQERRYSKCQVLTHSKQIQVQRLYQALLCLARQKQQGRPMSQEQRSQ 212
            Q+L+Q +Q+     Q++       L   +Q+Q Q+L Q  L   +Q+QQ +   Q+Q+ Q
Sbjct: 1477 QILSQPQQQLQQLQQQQ-------LQQQQQLQQQQLQQQQLFQQQQQQQQQQQQQQQQQQ 1529

Query: 211  MNRKLEMLMMYLRQRSL 161
              ++ +  +++ +Q  +
Sbjct: 1530 QQQQQQQQLLHPQQMQI 1546


>sp|B0Z587|YCF2_OENGL Protein ycf2 OS=Oenothera glazioviana GN=ycf2-A
            PE=3 SV=1
          Length = 2376

 Score = 34.3 bits (77), Expect = 0.45
 Identities = 33/127 (25%), Positives = 52/127 (40%), Gaps = 1/127 (0%)
 Frame = -3

Query: 461  GTQIQVFTADIKPEGTEKQVVEMSSTDPVQTEIPSQGTGKEVLEMSSTYPFKADPGTETL 282
            GT+ +V   + + EGTE + VE +  +   TE   +GT +EV           +   E  
Sbjct: 1872 GTEEEVEGTEEEVEGTEDEEVEGTEEEVEGTEEEVEGTEEEVEGTEDEEVEGTEEEVEGT 1931

Query: 281  PSAPLLGASEAAGQTDVSGAEKPDEQKTGNADDVPET-KELDALEARERDMTKAGDEGRS 105
                  G  E    T+       DE+  G  ++V  T +E++  E  E + T+   EG  
Sbjct: 1932 EDEEGEGTEEEVEGTEEEVEGTEDEEGEGTEEEVEGTEEEVEGTEDEEGEGTEEEVEGTE 1991

Query: 104  LPDMGTE 84
                GTE
Sbjct: 1992 EEVEGTE 1998


>sp|Q14524|SCN5A_HUMAN Sodium channel protein type 5 subunit alpha
            OS=Homo sapiens GN=SCN5A PE=1 SV=2
          Length = 2016

 Score = 34.3 bits (77), Expect = 0.45
 Identities = 33/125 (26%), Positives = 48/125 (38%), Gaps = 7/125 (5%)
 Frame = -3

Query: 434  DIKPEGTEKQVVEMSSTDPVQTEIPSQGTGKEVLEMSSTYPF----KADPGTETLPSAPL 267
            D +P      V E  + D  + E  S GT +E  +   + P     +A P + T      
Sbjct: 1041 DPEPVCVPIAVAESDTDDQEEDEENSLGTEEESSKQQESQPVSGGPEAPPDSRTWSQVSA 1100

Query: 266  LGASEA---AGQTDVSGAEKPDEQKTGNADDVPETKELDALEARERDMTKAGDEGRSLPD 96
              +SEA   A Q D     K + Q  G      ET E    E    DMT   +    +PD
Sbjct: 1101 TASSEAEASASQADWRQQWKAEPQAPGCG----ETPEDSCSEGSTADMTNTAELLEQIPD 1156

Query: 95   MGTEI 81
            +G ++
Sbjct: 1157 LGQDV 1161


>sp|Q28062|PGCB_BOVIN Brevican core protein OS=Bos taurus GN=BCAN
           PE=1 SV=1
          Length = 912

 Score = 34.3 bits (77), Expect = 0.45
 Identities = 25/99 (25%), Positives = 45/99 (45%), Gaps = 7/99 (7%)
 Frame = -3

Query: 326 SSTYPFKADPGTETLPSAPLLGASEAAGQT---DVSGAEKPDEQKTGNADDVPETKELDA 156
           + T P   +    + P + L+GA E   +T   ++SGA + + ++TG+++D P       
Sbjct: 541 TKTLPTPREGNLASPPPSTLVGAREIEEETGGPELSGAPRGESEETGSSEDAPSLLPATR 600

Query: 155 LEARERDM-TKAGDEGRSLPDMGTEI---PPLDLSQAAR 51
                RD+ T + +  R     GT +   P L    A+R
Sbjct: 601 APGDTRDLETPSEENSRRTVPAGTSVRAQPVLPTDSASR 639
tr_hit_id Q7UXL7
Definition tr|Q7UXL7|Q7UXL7_RHOBA Putative uncharacterized protein OS=Rhodopirellula baltica
Align length 145
Score (bit) 45.1
E-value 0.003
Report 
BLASTX 2.2.19 [Nov-02-2008]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BP911481|Adiantum capillus-veneris mRNA, clone:
YMU001_000005_D12.
         (571 letters)

Database: uniprot_trembl.fasta 
           7,341,751 sequences; 2,391,615,440 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tr|Q7UXL7|Q7UXL7_RHOBA Putative uncharacterized protein OS=Rhodo...    45   0.003
tr|B3M1H3|B3M1H3_DROAN GF18404 OS=Drosophila ananassae GN=GF1840...    42   0.024
tr|Q3IS97|Q3IS97_NATPD Probable cell surface glycoprotein OS=Nat...    42   0.024
tr|Q51912|Q51912_PEPMA Putative uncharacterized protein OS=Pepto...    41   0.041
tr|B6NLE1|B6NLE1_BRAFL Putative uncharacterized protein OS=Branc...    40   0.12 
tr|B4LDR6|B4LDR6_DROVI GJ12968 OS=Drosophila virilis GN=GJ12968 ...    40   0.12 
tr|B3MIK2|B3MIK2_DROAN GF11088 OS=Drosophila ananassae GN=GF1108...    40   0.12 
tr|B4PPH4|B4PPH4_DROYA GE10412 OS=Drosophila yakuba GN=GE10412 P...    39   0.15 
tr|B4E111|B4E111_HUMAN cDNA FLJ57346, highly similar to Homo sap...    39   0.15 
tr|A0JLU0|A0JLU0_HUMAN TCOF1 protein (Fragment) OS=Homo sapiens ...    39   0.15 
tr|Q2FBJ5|Q2FBJ5_MACMU Treacle (Fragment) OS=Macaca mulatta GN=T...    39   0.20 
tr|Q1ECC8|Q1ECC8_DROME IP01548p OS=Drosophila melanogaster GN=tr...    39   0.20 
tr|A0NDN5|A0NDN5_ANOGA AGAP004411-PA OS=Anopheles gambiae GN=AGA...    39   0.20 
tr|B4M9G3|B4M9G3_DROVI GJ17918 OS=Drosophila virilis GN=GJ17918 ...    39   0.20 
tr|Q4SE75|Q4SE75_TETNG Chromosome undetermined SCAF14625, whole ...    39   0.26 
tr|Q9M0Q2|Q9M0Q2_ARATH Putative uncharacterized protein AT4g0939...    39   0.26 
tr|Q5B1D1|Q5B1D1_EMENI Putative uncharacterized protein OS=Emeri...    39   0.26 
tr|A8R208|A8R208_9MURI ALEX (Fragment) OS=Mastomys huberti GN=Gn...    38   0.34 
tr|Q82EY2|Q82EY2_STRAW Putative uncharacterized protein OS=Strep...    38   0.34 
tr|Q3ZEL8|Q3ZEL8_MACMU XL (Fragment) OS=Macaca mulatta PE=4 SV=1       38   0.34 
tr|Q5TVN3|Q5TVN3_ANOGA AGAP010846-PA (Fragment) OS=Anopheles gam...    38   0.34 
tr|Q54UN7|Q54UN7_DICDI Phox domain-containing protein OS=Dictyos...    38   0.35 
tr|B4R0V6|B4R0V6_DROSI GD17578 OS=Drosophila simulans GN=GD17578...    38   0.45 
tr|Q55UN6|Q55UN6_CRYNE Putative uncharacterized protein OS=Crypt...    38   0.45 
tr|Q1DNH1|Q1DNH1_COCIM Putative uncharacterized protein OS=Cocci...    38   0.45 
tr|A1CQD5|A1CQD5_ASPCL La domain family OS=Aspergillus clavatus ...    38   0.45 
tr|B4MIG7|B4MIG7_DROWI GK10256 OS=Drosophila willistoni GN=GK102...    38   0.46 
tr|Q7XP28|Q7XP28_ORYSJ OSJNBa0027H09.11 protein (B1340F09.20 pro...    37   0.59 
tr|B0X1G5|B0X1G5_CULQU Microtubule-associated protein futsch OS=...    37   0.59 
tr|B6Q6N2|B6Q6N2_PENMA PT repeat family protein OS=Penicillium m...    37   0.59 

>tr|Q7UXL7|Q7UXL7_RHOBA Putative uncharacterized protein
           OS=Rhodopirellula baltica GN=RB1252 PE=4 SV=1
          Length = 665

 Score = 45.1 bits (105), Expect = 0.003
 Identities = 39/145 (26%), Positives = 65/145 (44%), Gaps = 3/145 (2%)
 Frame = -3

Query: 428 KPEGTEKQVVEMSSTDPVQTEIPSQGTGKEVLEMSSTYPFKADPGTETL---PSAPLLGA 258
           KPE TE    EM  T+P +++  S  T +E           A+P TE +       + G 
Sbjct: 444 KPESTEAAEEEMKETEPAESDDASAETTEE-----------AEPATEEVEVTEEVEVTGE 492

Query: 257 SEAAGQTDVSGAEKPDEQKTGNADDVPETKELDALEARERDMTKAGDEGRSLPDMGTEIP 78
            EA+G+    GA   DE +  + D+     E+   E++E    +A DE  +  +M  +  
Sbjct: 493 GEASGEG--QGAITQDEDE--STDEPSGEAEVQDDESKETPAEEADDEAAADEEMALQPA 548

Query: 77  PLDLSQAAREESNQQGIDSKSKIEK 3
             D ++A  EE ++   D  ++ EK
Sbjct: 549 GEDATEAPAEEDDELTFDELTEEEK 573


>tr|B3M1H3|B3M1H3_DROAN GF18404 OS=Drosophila ananassae GN=GF18404
           PE=4 SV=1
          Length = 382

 Score = 42.0 bits (97), Expect = 0.024
 Identities = 44/164 (26%), Positives = 64/164 (39%), Gaps = 12/164 (7%)
 Frame = -3

Query: 458 TQIQVFTADIKPEGTEKQV----VEMSSTD-PVQTEIPSQGTGKEVLEMSSTYPFKADPG 294
           T   V T D   E TE  V      + +TD PV+T    + T  E  E S +    ++  
Sbjct: 180 TDAPVETTDAPVETTEAPVETTEAPVETTDAPVETTEAPEETTTESEEGSGS----SEET 235

Query: 293 TETLPSAPLLGASEAAGQTDVSGAEKPDEQKTGNADD---VPETKELDA----LEARERD 135
           T   P      + E +G       E P+E  T  A+D    PE    DA     +A E  
Sbjct: 236 TTQEPEDSTTDSDEGSGSDTTQAPEDPEESTTDAAEDTTQAPEESTTDAGEETTQAPEES 295

Query: 134 MTKAGDEGRSLPDMGTEIPPLDLSQAAREESNQQGIDSKSKIEK 3
            T AG+E    P+  T     + +QA  E +   G ++    E+
Sbjct: 296 TTDAGEETTQAPEESTTDAGEETTQAPEESTTDAGEETTQAPEE 339


>tr|Q3IS97|Q3IS97_NATPD Probable cell surface glycoprotein
            OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678)
            GN=NP1800A PE=4 SV=1
          Length = 1241

 Score = 42.0 bits (97), Expect = 0.024
 Identities = 43/165 (26%), Positives = 66/165 (40%), Gaps = 10/165 (6%)
 Frame = -3

Query: 503  SMEGTDKHFPISLLGTQIQ-------VFTADIKPEGTEKQVVEMSSTDPVQTEIPSQGTG 345
            ++E  D +F  SL G  ++       V T +   +G  +Q V +S  D   TE  +   G
Sbjct: 524  TLEAGDPNFEASLEGDAVEAGEEVDLVGTVENTGDGAGEQDVTLSVADEENTETLALAVG 583

Query: 344  KEVLEMSSTYPFKADPGTETLPSAPLLGASEAAGQTDVSGAEKPDEQKTGNADDVPETKE 165
             +   + S      D G  T      L   +A  + +V+ +E  D+ +T + DDV     
Sbjct: 584  DDETILLSWETDADDDGEYTAE----LDTGDATAEAEVTVSEA-DDNETDSGDDVLTATS 638

Query: 164  LDALEARERDM---TKAGDEGRSLPDMGTEIPPLDLSQAAREESN 39
                 A   D    T A DEG SLPD      P++L      + N
Sbjct: 639  QGGFIAFTEDTSSETTASDEGLSLPDEDDGDTPIELEADYNPDDN 683


>tr|Q51912|Q51912_PEPMA Putative uncharacterized protein
           OS=Peptostreptococcus magnus PE=1 SV=1
          Length = 719

 Score = 41.2 bits (95), Expect = 0.041
 Identities = 39/144 (27%), Positives = 62/144 (43%), Gaps = 1/144 (0%)
 Frame = -3

Query: 431 IKPEGTEKQVVEMSSTDPVQTEIPSQGTGKEVLEMSSTYPFKADPGTETLPSAPLLGASE 252
           ++ E  EK V     ++P   ++PS  +     ++ ST    ++P T  +PS P    +E
Sbjct: 572 VEAETPEKPV---EPSEPSTPDVPSNPSNPSTPDVPSTPDVPSNPSTPEVPSNPSTPGNE 628

Query: 251 AAGQTDVSGAEKP-DEQKTGNADDVPETKELDALEARERDMTKAGDEGRSLPDMGTEIPP 75
                     EKP +EQK GN             E +  +  K G+E +     G E  P
Sbjct: 629 ----------EKPGNEQKPGN-------------EQKPGNEQKPGNEQKP----GNEQKP 661

Query: 74  LDLSQAAREESNQQGIDSKSKIEK 3
              S+  +EE+ + G+DS  K EK
Sbjct: 662 DQPSKPEKEENGKGGVDSPKKKEK 685


>tr|B6NLE1|B6NLE1_BRAFL Putative uncharacterized protein
           OS=Branchiostoma floridae GN=BRAFLDRAFT_96524 PE=4 SV=1
          Length = 662

 Score = 39.7 bits (91), Expect = 0.12
 Identities = 29/117 (24%), Positives = 47/117 (40%)
 Frame = -3

Query: 434 DIKPEGTEKQVVEMSSTDPVQTEIPSQGTGKEVLEMSSTYPFKADPGTETLPSAPLLGAS 255
           +I+PEGT +   E   T   + E   +GT +   E   T   +A+P   + P A   G S
Sbjct: 143 EIEPEGTSEPEAEPEGTSEPEAE--PEGTSEPEAEPKGTSEPEAEPEGTSEPEAEPKGTS 200

Query: 254 EAAGQTDVSGAEKPDEQKTGNADDVPETKELDALEARERDMTKAGDEGRSLPDMGTE 84
           E   + + +   + + + T   +  PE       E  E    +   EG S P+   E
Sbjct: 201 EPEAEPEGTSGPEAEPEGTSEPEAEPEGTSEPEAEPEETPEPETEPEGASEPEAEPE 257



 Score = 38.9 bits (89), Expect = 0.20
 Identities = 33/144 (22%), Positives = 56/144 (38%), Gaps = 9/144 (6%)
 Frame = -3

Query: 434 DIKPEGTEKQVVEMSSTDPVQTEIPSQ------GTGKEVLEMSSTYPFKADPGTETLPSA 273
           +++PEG  +   E   T   + E  S+      GT +   E   T   +A+P   + P A
Sbjct: 55  EVEPEGISEPQAEPEGTSEAEPEGTSEPEGEPEGTSEPEAEPEGTSEPEAEPEGTSEPEA 114

Query: 272 PLLGASEAAGQTDVSGAEKPDEQKTGNADDVPETKELDALEARERDMTKAGDEGRSLPD- 96
             +G SE   + + S   + + + T   +  PE       E       +A  EG S P+ 
Sbjct: 115 EPVGTSEPEAEPEGSSEPEAEPEGTSEPEIEPEGTSEPEAEPEGTSEPEAEPEGTSEPEA 174

Query: 95  --MGTEIPPLDLSQAAREESNQQG 30
              GT  P  +    +  E+  +G
Sbjct: 175 EPKGTSEPEAEPEGTSEPEAEPKG 198



 Score = 38.1 bits (87), Expect = 0.34
 Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 2/122 (1%)
 Frame = -3

Query: 434 DIKPEGTEKQVVEMSSTDPVQTEIPSQGTGKEVLEMSSTYPFKADPGTETLPSAPLLGAS 255
           + +PEG+ +   E   T   + EI  +GT +   E   T   +A+P   + P A   G S
Sbjct: 123 EAEPEGSSEPEAEPEGTS--EPEIEPEGTSEPEAEPEGTSEPEAEPEGTSEPEAEPKGTS 180

Query: 254 EAAGQTDVSGAEKPDEQKTGNADDVPETKELDALEARERDMT--KAGDEGRSLPDMGTEI 81
           E   + +  G  +P+ +  G ++   E +     EA     +  +A  EG S P+   E 
Sbjct: 181 EP--EAEPEGTSEPEAEPKGTSEPEAEPEGTSGPEAEPEGTSEPEAEPEGTSEPEAEPEE 238

Query: 80  PP 75
            P
Sbjct: 239 TP 240



 Score = 36.2 bits (82), Expect = 1.3
 Identities = 28/117 (23%), Positives = 47/117 (40%)
 Frame = -3

Query: 434 DIKPEGTEKQVVEMSSTDPVQTEIPSQGTGKEVLEMSSTYPFKADPGTETLPSAPLLGAS 255
           + +PEGT +   E   T   + E   +GT +   E   T   +A+P   + P A   G S
Sbjct: 163 EAEPEGTSEPEAEPKGTSEPEAE--PEGTSEPEAEPKGTSEPEAEPEGTSGPEAEPEGTS 220

Query: 254 EAAGQTDVSGAEKPDEQKTGNADDVPETKELDALEARERDMTKAGDEGRSLPDMGTE 84
           E   + + +   + + ++T   +  PE       E       +A  EG S P+   E
Sbjct: 221 EPEAEPEGTSEPEAEPEETPEPETEPEGASEPEAEPEGESEPEAEPEGISEPEAEPE 277


>tr|B4LDR6|B4LDR6_DROVI GJ12968 OS=Drosophila virilis GN=GJ12968
           PE=4 SV=1
          Length = 1640

 Score = 39.7 bits (91), Expect = 0.12
 Identities = 40/173 (23%), Positives = 73/173 (42%), Gaps = 5/173 (2%)
 Frame = -3

Query: 539 EQLEERAPS----LGTSMEGTDKHFPISLLGTQIQVFTADIKPEGTEKQVVEMSSTDPVQ 372
           +QLE+   S       +  G D    +S + +   V   +  PE  E++ VE S    ++
Sbjct: 510 QQLEDEKESSTGEAAAAAAGDDDLIAVSEIESATNV-PKETLPENVEQEEVEQSGDHEIE 568

Query: 371 TEIPSQGTGKEVLEMSSTYPFKADPGTETLPSAPLLGASEAAGQTDVSGAEKPDEQKTGN 192
           TE       +   E + T   +A+P    +P+     A++   +     A++ DEQ+   
Sbjct: 569 TETELAPQAQAEPEEAET---QAEPQQVDVPA-----ANDEVEEAPAKPADEADEQQAAP 620

Query: 191 ADDVPETKELDALEARERDMTKAGD-EGRSLPDMGTEIPPLDLSQAAREESNQ 36
            + VP   E   +E    + TK  D E ++ P +G + P L++     EE  +
Sbjct: 621 EETVPTETEATEIE----EPTKLEDSESQAEPIVGVKEPELEMENQVEEEQQK 669


>tr|B3MIK2|B3MIK2_DROAN GF11088 OS=Drosophila ananassae GN=GF11088
           PE=4 SV=1
          Length = 1323

 Score = 39.7 bits (91), Expect = 0.12
 Identities = 38/170 (22%), Positives = 68/170 (40%), Gaps = 23/170 (13%)
 Frame = -3

Query: 476 PISLLGTQIQVFTADIKPEGTEK-QVVEMSSTDPVQTEIPSQGTGKEV------------ 336
           P   LG      TA IK E       V+ + +DP+   +  Q  G+++            
Sbjct: 35  PTPALGKTSISSTASIKDEKIANGDEVDDTVSDPITESVKDQNAGRDLDALLDKISSIVD 94

Query: 335 --------LEMSSTYPFKADPGTETLPSAPLLGASEAAGQTDVSGAEKPD--EQKTGNAD 186
                   L+ S     K+D G+E   +A     ++  G+ +  GAEK +  E+ +  A 
Sbjct: 95  RSPKNSDELDNSDKLSDKSDAGSENQKTAAEPVENQLEGKEEEIGAEKENKKEEDSSAAT 154

Query: 185 DVPETKELDALEARERDMTKAGDEGRSLPDMGTEIPPLDLSQAAREESNQ 36
           DV E   ++     + D    G +   + D   ++P  + S  A+EE ++
Sbjct: 155 DVIELSNVETESELDADNKSEGKDVEVIEDPDQDVPAPESSTDAKEEESE 204


>tr|B4PPH4|B4PPH4_DROYA GE10412 OS=Drosophila yakuba GN=GE10412 PE=4
            SV=1
          Length = 1292

 Score = 39.3 bits (90), Expect = 0.15
 Identities = 40/148 (27%), Positives = 61/148 (41%), Gaps = 9/148 (6%)
 Frame = -3

Query: 428  KPEGTEKQVVEMSSTDPVQTEIPSQGTGKEVLEMSSTYPFKADPGTETLPSAPLLGASEA 249
            KPE   K+  E SS         + G  K     + + P +A P  +  P A   GA EA
Sbjct: 1090 KPEAAAKK--EESSKTEASKPAATNGAAKSA---APSAPSEAKPDPKLKPGAA--GAPEA 1142

Query: 248  AGQTDVSGAEKPDEQKTG-------NADDVP--ETKELDALEARERDMTKAGDEGRSLPD 96
               T+  GA KPD++KTG        AD  P    K+ D     ++D     D+ +   D
Sbjct: 1143 TKATN--GASKPDDKKTGPEESKKAPADSKPGDGAKDKDKKPGDDKDKKSGDDKDKKPAD 1200

Query: 95   MGTEIPPLDLSQAAREESNQQGIDSKSK 12
               + P  D  +   ++ +++  D K K
Sbjct: 1201 NNDKKPGDDKDKKPGDDKDKKPGDDKDK 1228


>tr|B4E111|B4E111_HUMAN cDNA FLJ57346, highly similar to Homo
           sapiens Treacher Collins-Franceschetti syndrome 1
           (TCOF1), transcript variant 1, mRNA (Fragment) OS=Homo
           sapiens PE=2 SV=1
          Length = 1415

 Score = 39.3 bits (90), Expect = 0.15
 Identities = 44/178 (24%), Positives = 64/178 (35%), Gaps = 24/178 (13%)
 Frame = -3

Query: 467 LLGTQIQVFTADIKPEGTEKQVVEMSSTDPVQTEIPSQGTGKEVLE-MSSTYPFK-ADPG 294
           L  T   V  AD+     EK   E          +P   TGK V   +S   P K A+P 
Sbjct: 105 LASTNSSVLGADLPSSMKEKAKAETEKAGKTGNSMPHPATGKTVANLLSGKSPRKSAEPS 164

Query: 293 --------TETLPSAPLLGASEAAGQTDVSGAEKPDEQKTGNADDV---------PETKE 165
                   TE   S P  GA+   G      A+   E  + ++D+          P   +
Sbjct: 165 ANTTLVSETEEEGSVPAFGAAAKPGMVSAGQADSSSEDTSSSSDETDVEGKPSVKPAQVK 224

Query: 164 LDALEARERDMTKA----GDEGRSLPDM-GTEIPPLDLSQAAREESNQQGIDSKSKIE 6
             ++  +E    KA    G  G   P + G  +PP   ++   EES      S+S+ E
Sbjct: 225 ASSVSTKESPARKAAPAPGKVGDVTPQVKGGALPPAKRAKKPEEESESSEEGSESEEE 282


>tr|A0JLU0|A0JLU0_HUMAN TCOF1 protein (Fragment) OS=Homo sapiens
           GN=TCOF1 PE=2 SV=1
          Length = 1414

 Score = 39.3 bits (90), Expect = 0.15
 Identities = 44/178 (24%), Positives = 64/178 (35%), Gaps = 24/178 (13%)
 Frame = -3

Query: 467 LLGTQIQVFTADIKPEGTEKQVVEMSSTDPVQTEIPSQGTGKEVLE-MSSTYPFK-ADPG 294
           L  T   V  AD+     EK   E          +P   TGK V   +S   P K A+P 
Sbjct: 105 LASTNSSVLGADLPSSMKEKAKAETEKAGKTGNSMPHPATGKTVANLLSGKSPRKSAEPS 164

Query: 293 --------TETLPSAPLLGASEAAGQTDVSGAEKPDEQKTGNADDV---------PETKE 165
                   TE   S P  GA+   G      A+   E  + ++D+          P   +
Sbjct: 165 ANTTLVSETEEEGSVPAFGAAAKPGMVSAGQADSSSEDTSSSSDETDVEGKPSVKPAQVK 224

Query: 164 LDALEARERDMTKA----GDEGRSLPDM-GTEIPPLDLSQAAREESNQQGIDSKSKIE 6
             ++  +E    KA    G  G   P + G  +PP   ++   EES      S+S+ E
Sbjct: 225 ASSVSTKESPARKAAPAPGKVGDVTPQVKGGALPPAKRAKKPEEESESSEEGSESEEE 282