|
YMU02A01NGRL0003_A01
|
485
|
Adiantum capillus-veneris mRNA for unknowm protein
|
DK943491
|
CL109Contig1
|
|
|
DK943491
|
|
|
YMU02A01NGRL0003_A01 |
|
|
YMU02 |
|
|
485 |
|
|
Adiantum capillus-veneris mRNA for unknowm protein |
|
|
DK943491 |
|
|
young leaves |
|
|
CL109Contig1 |
|
|
AAGCACTCGACAGTACCATCAAGTGTTAGTCATGGCTTCTAAGAAGATAACGTGCATGCT
GGTGATAGTGATGGTGATGCTGGTGGCATACATGAGCAGCGTTGCTAATGCTGAGGTGGA
GGAAGTGGGGCGTAAATTAGTGGCTGGGGCAGGGGCAGAAGCAGGTGAGGAGGCCGAGTT
GTGGGCCAAGAAAGGTCATTACCCTTACAAGAAAGGGTACAAGAAGGGCGGCTACCACCA
CAAGAAGGGCGGCGGCTACGGCAAGGGTCCGGGCCACCCTCACTAACTCAAGGCAGCTGC
TTCGTCCGGGCGCGTCTTCTGTCCGATTCTTGGGTTTATCCACCCCAGACGCGCGTTCCT
TGTGAAATAAATAATACGGTGTCAGCACTGAAGTGTTAAAATTGTCTTTGTTGTTGCAAC
CTGTGTACCTTATGGGAATTCATTTGCTGGTTTAACTTTAACAAAAAAAAAAAAAAAAAA
AAAAA |
|
|
- |
|
|
Link to BlastX Result : Swiss-Prot |
|
|
sp|Q54F40|Y1133_DICDI Probable serine/threonine-protein kinase DDB_G0291133 OS=Dictyostelium discoideum |
|
|
21 |
|
|
29.6 |
|
|
6.6 |
|
|
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK943491|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_A01, 5'
(459 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q54F40|Y1133_DICDI Probable serine/threonine-protein kinase D... 30 6.6
sp|Q6ZS49|YQ050_HUMAN Putative uncharacterized protein FLJ45831 ... 29 8.6
>sp|Q54F40|Y1133_DICDI Probable serine/threonine-protein kinase
DDB_G0291133 OS=Dictyostelium discoideum GN=DDB_G0291133
PE=3 SV=1
Length = 778
Score = 29.6 bits (65), Expect = 6.6
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = -3
Query: 415 NNKDNFNTSVLTPYYLFHKER 353
NN +N+N ++TPY+ + KER
Sbjct: 510 NNINNYNLKLITPYFQYQKER 530
>sp|Q6ZS49|YQ050_HUMAN Putative uncharacterized protein FLJ45831
OS=Homo sapiens PE=5 SV=1
Length = 121
Score = 29.3 bits (64), Expect = 8.6
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = -3
Query: 397 NTSVLTPYYLFHKERASGVDKPK 329
N S L PYYLFH+ R GVD K
Sbjct: 69 NASKLMPYYLFHRSR--GVDNSK 89
|
|
|
Link to BlastX Result : TrEMBL |
|
|
tr|Q9FCG8|Q9FCG8_STRCO Putative uncharacterized protein SCO4201 OS=Streptomyces coelicolor |
|
|
39 |
|
|
32.7 |
|
|
9.2 |
|
|
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK943491|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_A01, 5'
(459 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|Q9FCG8|Q9FCG8_STRCO Putative uncharacterized protein SCO4201 ... 33 9.2
tr|B5HLR9|B5HLR9_9ACTO Magnesium or manganese-dependent protein ... 33 9.2
>tr|Q9FCG8|Q9FCG8_STRCO Putative uncharacterized protein SCO4201
OS=Streptomyces coelicolor GN=SCO4201 PE=4 SV=1
Length = 544
Score = 32.7 bits (73), Expect = 9.2
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +1
Query: 181 VGQERSLPLQERVQEGRLPPQEGRRLRQGSGPPSLTQGS 297
V ++RS + R+ EGRL QE RRL +G P L GS
Sbjct: 281 VERKRSDSAERRLAEGRLRAQENRRLERGLLPTPLLAGS 319
>tr|B5HLR9|B5HLR9_9ACTO Magnesium or manganese-dependent protein
phosphatase OS=Streptomyces sviceus ATCC 29083
GN=SSEG_00354 PE=4 SV=1
Length = 478
Score = 32.7 bits (73), Expect = 9.2
Identities = 17/39 (43%), Positives = 24/39 (61%)
Frame = +1
Query: 181 VGQERSLPLQERVQEGRLPPQEGRRLRQGSGPPSLTQGS 297
V ++RS + R+ EGR+ QE RRL +G P L +GS
Sbjct: 215 VERKRSDTAERRLAEGRVRAQENRRLERGLLPTPLLEGS 253
|
|
|
YMU02A01NGRL0003_A02
|
342
|
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0003_A02. 5' end sequence.
|
DK943492
|
CL8Contig1
|
|
|
DK943492
|
|
|
YMU02A01NGRL0003_A02 |
|
|
YMU02 |
|
|
342 |
|
|
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0003_A02. 5' end sequence. |
|
|
DK943492 |
|
|
young leaves |
|
|
CL8Contig1 |
|
|
GTTCACAGAACTCCCTCACGTTCCTTTGCTTCGAAACGAGGGTAGGCACACCAGACACAA
AATTGAGTGATGCGTAATACGGACGGAGGTTCGAATCCTCGCAAGGCGTCCGGAACAAAA
GTCGTCTTGCATTTCCGGAATAAGTCTCCCGACCCCTTGCTTTCCACCAAGAGAAAGCAA
AAAGAACCCGGGCGGGAAAGTTTGATTTGGTCAATCTCCTTGCCCCTCCGAACTAAGTGG
CGACGAAACCGATCTTCGTATCGAGATGCGGGTGGGTCCTGTTGCTTCGGTGTCCCCCGA
AGCTAAATCTACCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
|
|
- |
|
|
Link to BlastX Result : Swiss-Prot |
|
|
sp|Q6NRW0|MTBP_XENLA Mdm2-binding protein OS=Xenopus laevis |
|
|
75 |
|
|
31.2 |
|
|
1.7 |
|
|
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK943492|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_A02, 5'
(313 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q6NRW0|MTBP_XENLA Mdm2-binding protein OS=Xenopus laevis GN=m... 31 1.7
sp|A1DNV8|YD156_NEOFI WD repeat-containing protein NFIA_058290 O... 30 2.9
sp|Q0P4G8|MTBP_XENTR Mdm2-binding protein OS=Xenopus tropicalis ... 30 2.9
sp|Q6A7M3|Y1495_PROAC UPF0090 protein PPA1495 OS=Propionibacteri... 30 3.7
sp|Q6PJG2|CN043_HUMAN Uncharacterized protein C14orf43 OS=Homo s... 30 3.7
sp|Q7TQN7|GP135_RAT Probable G-protein coupled receptor 135 OS=R... 30 4.9
sp|Q5B630|PABP_EMENI Polyadenylate-binding protein, cytoplasmic ... 29 6.4
sp|O05528|FLII_CAUCR Flagellum-specific ATP synthase OS=Caulobac... 29 6.4
>sp|Q6NRW0|MTBP_XENLA Mdm2-binding protein OS=Xenopus laevis GN=mtbp
PE=2 SV=1
Length = 860
Score = 31.2 bits (69), Expect = 1.7
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Frame = -3
Query: 278 DPPA-SRYEDRFRRHLVRRGKEIDQIKLSRPGSFC--FLLVESKGSGDLFRKCKTTFVPD 108
+PPA R ++R ++ R+ K+I + G +C + L++ KGSG CK T +
Sbjct: 335 NPPALQRSSKKWREYMSRKPKDIKVPGVELKGEYCSYYFLIQGKGSG----LCKATLLHS 390
Query: 107 ALRGFEPPSVLRITQ 63
A + S+L + Q
Sbjct: 391 ASQISGAASLLLLHQ 405
>sp|A1DNV8|YD156_NEOFI WD repeat-containing protein NFIA_058290
OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 /
NRRL 181) GN=NFIA_058290 PE=3 SV=1
Length = 527
Score = 30.4 bits (67), Expect = 2.9
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = +2
Query: 161 FPPRESKKNPGGKV*FGQSPCPSELSGDETDL---RIEMRVGPVASVSPEAK 307
FPP+ ++ +PGG + P P ++ ++ DL R+ R+ +A+ S AK
Sbjct: 38 FPPKSARSSPGGLTKPKKKPAPKKVKKEDEDLVPRRMSSRLRGLAADSEVAK 89
>sp|Q0P4G8|MTBP_XENTR Mdm2-binding protein OS=Xenopus tropicalis
GN=mtbp PE=2 SV=2
Length = 867
Score = 30.4 bits (67), Expect = 2.9
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = -3
Query: 278 DPPA-SRYEDRFRRHLVRRGKEIDQIKLSRPGSFC--FLLVESKGSGDLFRKCKTTFVPD 108
+PPA R ++R ++ R+ K+I + G +C + L++ KGSG CK T +
Sbjct: 339 NPPALQRSSKKWREYMSRKPKDIKVPGVELKGEYCSYYFLIQGKGSG----FCKATLLHS 394
Query: 107 A 105
A
Sbjct: 395 A 395
>sp|Q6A7M3|Y1495_PROAC UPF0090 protein PPA1495 OS=Propionibacterium
acnes GN=PPA1495 PE=3 SV=1
Length = 178
Score = 30.0 bits (66), Expect = 3.7
Identities = 18/61 (29%), Positives = 30/61 (49%)
Frame = +2
Query: 131 ISGISLPTPCFPPRESKKNPGGKV*FGQSPCPSELSGDETDLRIEMRVGPVASVSPEAKS 310
+S + TP PR ++N G V F +P + SG+ D RI V ++ EA++
Sbjct: 80 VSSRGVSTPLTQPRHYRRNIGHLVRFTLNPAEEQKSGETFDGRIAEAGEEVVTLEVEAEN 139
Query: 311 T 313
+
Sbjct: 140 S 140
>sp|Q6PJG2|CN043_HUMAN Uncharacterized protein C14orf43 OS=Homo
sapiens GN=C14orf43 PE=1 SV=2
Length = 1045
Score = 30.0 bits (66), Expect = 3.7
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = +1
Query: 73 RNTDGGSNPRK---ASGTKVVLHFRNKSPDPLLSTKRKQKEPGRESLIWSISLPLRT 234
++ G RK AS TK + F +P L+TKR +++ G LI +S+P+RT
Sbjct: 483 KDGSGSEEKRKSVLASTTKCGVEFS----EPSLATKRAREDSGMVPLIIPVSVPVRT 535
>sp|Q7TQN7|GP135_RAT Probable G-protein coupled receptor 135
OS=Rattus norvegicus GN=Gpr135 PE=2 SV=1
Length = 457
Score = 29.6 bits (65), Expect = 4.9
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 9/48 (18%)
Frame = +1
Query: 91 SNPRKASGTKVV---------LHFRNKSPDPLLSTKRKQKEPGRESLI 207
SNP SG +VV L FR PDP+++ ++ K R+S I
Sbjct: 410 SNPASGSGGEVVMWARKNPVVLFFREDPPDPVMAVYKQHKSETRDSSI 457
>sp|Q5B630|PABP_EMENI Polyadenylate-binding protein, cytoplasmic and
nuclear OS=Emericella nidulans GN=pab1 PE=2 SV=2
Length = 732
Score = 29.3 bits (64), Expect = 6.4
Identities = 18/44 (40%), Positives = 21/44 (47%), Gaps = 4/44 (9%)
Frame = -2
Query: 225 GQGD*PNQTFPPGFFLLSLGGKQGV----GRLIPEMQDDFCSGR 106
G+G PNQ PP F L +G QG G P +Q F GR
Sbjct: 538 GRGVGPNQQIPPNFQGLPMGAMQGPGIPNGMGYPMVQGQFGGGR 581
>sp|O05528|FLII_CAUCR Flagellum-specific ATP synthase OS=Caulobacter
crescentus GN=fliI PE=3 SV=2
Length = 444
Score = 29.3 bits (64), Expect = 6.4
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +2
Query: 206 FGQSPCPSELSGDETDLRIEMRVGPVASVSPEAK 307
FGQ P P+E+ G + M GPV V P A+
Sbjct: 48 FGQKPLPAEVVGFRETRALLMPFGPVEGVGPGAE 81
|
|
|
Link to BlastX Result : TrEMBL |
|
|
tr|Q7UIE7|Q7UIE7_RHOBA Putative uncharacterized protein OS=Rhodopirellula baltica |
|
|
41 |
|
|
35.4 |
|
|
1.4 |
|
|
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK943492|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_A02, 5'
(313 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|Q7UIE7|Q7UIE7_RHOBA Putative uncharacterized protein OS=Rhodo... 35 1.4
tr|B8HLS9|B8HLS9_9CHRO Metallophosphoesterase OS=Cyanothece sp. ... 35 1.4
tr|B6KNM5|B6KNM5_TOXGO Putative uncharacterized protein OS=Toxop... 35 2.5
tr|Q07YM3|Q07YM3_SHEFN ATP synthase A chain OS=Shewanella frigid... 34 4.2
tr|Q851X6|Q851X6_ORYSJ Putative uncharacterized protein OSJNBa00... 33 7.1
tr|Q10AH3|Q10AH3_ORYSJ Os03g0852300 protein OS=Oryza sativa subs... 33 7.1
tr|A3APU5|A3APU5_ORYSJ Putative uncharacterized protein OS=Oryza... 33 7.1
tr|A7F0J5|A7F0J5_SCLS1 Putative uncharacterized protein OS=Scler... 33 9.3
>tr|Q7UIE7|Q7UIE7_RHOBA Putative uncharacterized protein
OS=Rhodopirellula baltica GN=RB12581 PE=4 SV=1
Length = 174
Score = 35.4 bits (80), Expect = 1.4
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 127 LHFRNKSPDPLLSTKRKQKEPGRESLIWSISLPLRTKWRRN 249
L RN+SP+PLL T + K R + W+ +R WR +
Sbjct: 133 LDARNRSPNPLLKTSWRMKANSRSRITWTPKTKIRDGWRNS 173
>tr|B8HLS9|B8HLS9_9CHRO Metallophosphoesterase OS=Cyanothece sp. PCC
7425 GN=Cyan7425_1187 PE=4 SV=1
Length = 243
Score = 35.4 bits (80), Expect = 1.4
Identities = 27/83 (32%), Positives = 36/83 (43%), Gaps = 8/83 (9%)
Frame = -1
Query: 229 GGARRLTKSNFPAR---VLFAFSWWKARGRETYSGNARRLLFRTPCEDSNLRPYYASLNF 59
G + S FP + L SW + GRET +G R LF E PY+ L
Sbjct: 66 GNHELMMLSAFPQQSEHTLHLLSWLSSGGRETIAGYTSRDLFLEHMEWMQTLPYFLDLGD 125
Query: 58 V----SGV-PTLVSKQRNVREFC 5
+ +GV PTL ++ EFC
Sbjct: 126 IWLVHAGVEPTLPLAEQTTEEFC 148
>tr|B6KNM5|B6KNM5_TOXGO Putative uncharacterized protein
OS=Toxoplasma gondii ME49 GN=TGME49_053930 PE=4 SV=1
Length = 1857
Score = 34.7 bits (78), Expect = 2.5
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +2
Query: 128 CISGISLPTPCFPPRESKKNPGGKV*FGQSPCP 226
C+ G S PTPC P + PGG+ G SPCP
Sbjct: 52 CLEGASEPTPC-PAGTFRDQPGGEALDGCSPCP 83
>tr|Q07YM3|Q07YM3_SHEFN ATP synthase A chain OS=Shewanella
frigidimarina (strain NCIMB 400) GN=Sfri_3053 PE=3 SV=1
Length = 246
Score = 33.9 bits (76), Expect = 4.2
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = -3
Query: 281 QDPPASRYEDRFRRHLVRRGKEIDQIKLSRPGSFCFLLVESKGSGDLFRKCKTTFVPDAL 102
+D SR+++ ++ K+I+++ LS P + L G LF T+ + +
Sbjct: 45 KDMQRSRWQNLLEVVVITISKQIEEVGLSNPHKYLGFL------GSLFLFIATSAICTVI 98
Query: 101 RGFEPP----SVLRITQFCVWCAYPRFEAKEREGV 9
GFEPP S CV+ A P F E++G+
Sbjct: 99 PGFEPPTGSLSSTVALALCVFVAVPMF-GIEKQGL 132
>tr|Q851X6|Q851X6_ORYSJ Putative uncharacterized protein
OSJNBa0015N08.25 OS=Oryza sativa subsp. japonica
GN=OSJNBa0015N08.25 PE=4 SV=1
Length = 289
Score = 33.1 bits (74), Expect = 7.1
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 6/67 (8%)
Frame = +1
Query: 97 PRKASGTKVVLHFR----NKSPDPLLSTKRKQ--KEPGRESLIWSISLPLRTKWRRNRSS 258
PRK G K R + P P K+K+ KEP RE S P+ T ++N+ +
Sbjct: 89 PRKHKGAKSEKPHRVSGEGEKPTPTKKKKKKESSKEPKREKQ--QASAPMSTPSKKNKEA 146
Query: 259 YRDAGGS 279
RD GG+
Sbjct: 147 KRDTGGA 153
>tr|Q10AH3|Q10AH3_ORYSJ Os03g0852300 protein OS=Oryza sativa subsp.
japonica GN=Os03g0852300 PE=2 SV=1
Length = 303
Score = 33.1 bits (74), Expect = 7.1
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 6/67 (8%)
Frame = +1
Query: 97 PRKASGTKVVLHFR----NKSPDPLLSTKRKQ--KEPGRESLIWSISLPLRTKWRRNRSS 258
PRK G K R + P P K+K+ KEP RE S P+ T ++N+ +
Sbjct: 89 PRKHKGAKSEKPHRVSGEGEKPTPTKKKKKKESSKEPKREKQ--QASAPMSTPSKKNKEA 146
Query: 259 YRDAGGS 279
RD GG+
Sbjct: 147 KRDTGGA 153
>tr|A3APU5|A3APU5_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_012817 PE=4 SV=1
Length = 227
Score = 33.1 bits (74), Expect = 7.1
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 6/67 (8%)
Frame = +1
Query: 97 PRKASGTKVVLHFR----NKSPDPLLSTKRKQ--KEPGRESLIWSISLPLRTKWRRNRSS 258
PRK G K R + P P K+K+ KEP RE S P+ T ++N+ +
Sbjct: 89 PRKHKGAKSEKPHRVSGEGEKPTPTKKKKKKESSKEPKREKQ--QASAPMSTPSKKNKEA 146
Query: 259 YRDAGGS 279
RD GG+
Sbjct: 147 KRDTGGA 153
>tr|A7F0J5|A7F0J5_SCLS1 Putative uncharacterized protein
OS=Sclerotinia sclerotiorum (strain ATCC 18683 / 1980 /
Ss-1) GN=SS1G_11113 PE=4 SV=1
Length = 557
Score = 32.7 bits (73), Expect = 9.3
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 5/49 (10%)
Frame = -1
Query: 193 ARVLFAFSWWKARGRETYSGNARRLLFRTPCE-----DSNLRPYYASLN 62
A +F+F WW A R TY+G + L ++ +S+ RP Y S+N
Sbjct: 507 AIAVFSFGWWWAGARRTYTGPKTKDLIQSIATEEGNYESDQRPDYGSMN 555
|
|
|
YMU02A01NGRL0003_A03
|
174
|
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0003_A03. 5' end sequence.
|
DK943493
|
CL1Contig2
|
|
|
DK943493
|
|
|
YMU02A01NGRL0003_A03 |
|
|
YMU02 |
|
|
174 |
|
|
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0003_A03. 5' end sequence. |
|
|
DK943493 |
|
|
young leaves |
|
|
CL1Contig2 |
|
|
AAGTCCTGGAAGAAAAGGGGGGCTTACCTACTAAATATCTGACGTGGCAGAAGGGATCTC
CCAGAGACAAGAAGGGATGATATATTGGAACGACAAGCAGGGAGGAGAAAGAATTGGGCA
AAAATGATGAATAGAATAAATGGAAAGAAAAGTAAAAAAAAAAAAAAAAAAAAA |
|
|
- |
|
|
Link to BlastX Result : Swiss-Prot |
|
|
- |
|
|
- |
|
|
- |
|
|
- |
|
|
|
|
|
Link to BlastX Result : TrEMBL |
|
|
tr|Q53N99|Q53N99_ORYSJ Os11g0245200 protein OS=Oryza sativa subsp. japonica |
|
|
29 |
|
|
35.0 |
|
|
1.9 |
|
|
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK943493|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_A03, 5'
(143 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|Q53N99|Q53N99_ORYSJ Os11g0245200 protein OS=Oryza sativa subs... 35 1.9
tr|B8BJW1|B8BJW1_ORYSI Putative uncharacterized protein OS=Oryza... 35 1.9
tr|A3CA56|A3CA56_ORYSJ Putative uncharacterized protein OS=Oryza... 35 1.9
>tr|Q53N99|Q53N99_ORYSJ Os11g0245200 protein OS=Oryza sativa subsp.
japonica GN=Os11g0245200 PE=4 SV=1
Length = 897
Score = 35.0 bits (79), Expect = 1.9
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -3
Query: 138 YSIHHFCPILSPPCLSFQYIIPSCLWEIP 52
YS CP L P CLS QY+ P+C +P
Sbjct: 352 YSTQSICPGLPPTCLSDQYLSPNCTCAVP 380
>tr|B8BJW1|B8BJW1_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_35675 PE=4 SV=1
Length = 954
Score = 35.0 bits (79), Expect = 1.9
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -3
Query: 138 YSIHHFCPILSPPCLSFQYIIPSCLWEIP 52
YS CP L P CLS QY+ P+C +P
Sbjct: 427 YSTQSICPGLPPTCLSDQYLSPNCTCAVP 455
>tr|A3CA56|A3CA56_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_032178 PE=4 SV=1
Length = 893
Score = 35.0 bits (79), Expect = 1.9
Identities = 14/29 (48%), Positives = 17/29 (58%)
Frame = -3
Query: 138 YSIHHFCPILSPPCLSFQYIIPSCLWEIP 52
YS CP L P CLS QY+ P+C +P
Sbjct: 352 YSTQSICPGLPPTCLSDQYLSPNCTCAVP 380
|
|
|
YMU02A01NGRL0003_A04
|
351
|
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0003_A04. 5' end sequence.
|
DK943494
|
CL5Contig1
|
|
|
DK943494
|
|
|
YMU02A01NGRL0003_A04 |
|
|
YMU02 |
|
|
351 |
|
|
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0003_A04. 5' end sequence. |
|
|
DK943494 |
|
|
young leaves |
|
|
CL5Contig1 |
|
|
GCACTCTTCATCTTGTCCTTCGGCTCAGAGGGGGCAATTAGGGGAATTCTTGGTGTAGTG
CCATCTCTTGATTTAGAAGTGGTGGTTTCTCTGTTCCTATGGTGTGCTGGATGTTCGTGA
GTTGTAGAAATTCAATAATCAATAATTGGGCTTTCTTGTAAGGTTTTGGAAGTACATTAC
TGCTGTCTATTGTCCCTAAGAGTCTGGTAACAAGAACGCCAGCGTTATTTTCAATCATCA
GTAGACAGGTGTTACATCTACTGCTCTGGTAACAAGAACCCTTTGTATGCTGGATGGTCT
GTGTTAGTTTTTGTTCATCATCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
|
|
- |
|
|
Link to BlastX Result : Swiss-Prot |
|
|
sp|Q9X758|ANSME_KLEPN Anaerobic sulfatase-maturating enzyme OS=Klebsiella pneumoniae |
|
|
27 |
|
|
30.4 |
|
|
2.8 |
|
|
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK943494|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_A04, 5'
(322 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9X758|ANSME_KLEPN Anaerobic sulfatase-maturating enzyme OS=K... 30 2.8
sp|P20714|ANSME_KLEAE Anaerobic sulfatase-maturating enzyme OS=K... 30 2.8
sp|Q08DK9|MUM1_BOVIN Mutated melanoma-associated antigen 1 OS=Bo... 30 3.7
sp|Q492L0|SYR_BLOPB Arginyl-tRNA synthetase OS=Blochmannia penns... 30 4.8
sp|P75612|Y081_MYCPN Putative ABC transporter ATP-binding protei... 29 8.2
>sp|Q9X758|ANSME_KLEPN Anaerobic sulfatase-maturating enzyme
OS=Klebsiella pneumoniae GN=atsB PE=1 SV=1
Length = 395
Score = 30.4 bits (67), Expect = 2.8
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -1
Query: 316 EQKLTQTIQHTKGSCYQSSRCNTCLLM 236
EQ Q HT GSC S+RC + L+M
Sbjct: 256 EQAWAQYFTHTSGSCVHSARCGSNLVM 282
>sp|P20714|ANSME_KLEAE Anaerobic sulfatase-maturating enzyme
OS=Klebsiella aerogenes GN=atsB PE=3 SV=1
Length = 405
Score = 30.4 bits (67), Expect = 2.8
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -1
Query: 316 EQKLTQTIQHTKGSCYQSSRCNTCLLM 236
EQ Q HT GSC S+RC + L+M
Sbjct: 256 EQAWAQYFTHTSGSCVHSARCGSNLVM 282
>sp|Q08DK9|MUM1_BOVIN Mutated melanoma-associated antigen 1 OS=Bos
taurus GN=MUM1 PE=2 SV=1
Length = 641
Score = 30.0 bits (66), Expect = 3.7
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -3
Query: 89 ETTTSKSRDGTTPRIPLIAPSEP 21
E S SR+GTTPR P + P EP
Sbjct: 100 ERQGSSSREGTTPRPPRVKPMEP 122
>sp|Q492L0|SYR_BLOPB Arginyl-tRNA synthetase OS=Blochmannia
pennsylvanicus (strain BPEN) GN=argS PE=3 SV=1
Length = 581
Score = 29.6 bits (65), Expect = 4.8
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -1
Query: 196 GTIDSSNVLPKPYKKAQLLIIEFLQLTNIQHTIGTEKPPLLN 71
G I S L P ++ I+F+ L ++ HTI EKP +N
Sbjct: 44 GLIAISKKLNIPIEEFAKKFIQFINLNDVAHTIKIEKPGFIN 85
>sp|P75612|Y081_MYCPN Putative ABC transporter ATP-binding protein
MG065 homolog OS=Mycoplasma pneumoniae GN=MPN_081 PE=3
SV=1
Length = 465
Score = 28.9 bits (63), Expect = 8.2
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -1
Query: 157 KKAQLLIIEFLQLTNIQHTIGTEKPPLLNQEMAL 56
K QL+ QLTN+ + I T KPPL Q+ L
Sbjct: 159 KTEQLINARNTQLTNLLNKIATTKPPLNKQQRLL 192
|
|
|
Link to BlastX Result : TrEMBL |
|
|
tr|B0X0H6|B0X0H6_CULQU Predicted protein OS=Culex quinquefasciatus |
|
|
76 |
|
|
38.1 |
|
|
0.22 |
|
|
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK943494|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_A04, 5'
(322 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|B0X0H6|B0X0H6_CULQU Predicted protein OS=Culex quinquefasciat... 38 0.22
>tr|B0X0H6|B0X0H6_CULQU Predicted protein OS=Culex quinquefasciatus
GN=CpipJ_CPIJ013022 PE=4 SV=1
Length = 142
Score = 38.1 bits (87), Expect = 0.22
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = -1
Query: 322 DDEQKLTQTIQHT-KGSCY-QSSRCNTCLLMIENNAGVLVTRLLGTIDSSNVLPKPYKKA 149
D E KL QT++H +G Y + +RC+ ++E G G + P+P +
Sbjct: 11 DPEAKLLQTVRHCLEGDSYLRRARCDMRRKVLETIQGTGENLFAGNTADQQLPPRPIRLI 70
Query: 148 QLLIIEFLQLTNIQHT 101
LI+E+L N+Q+T
Sbjct: 71 NQLILEYLDWYNLQYT 86
|
|
|
YMU02A01NGRL0003_A05
|
518
|
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0003_A05. 5' end sequence.
|
DK943495
|
CL1Contig3
|
|
|
DK943495
|
|
|
YMU02A01NGRL0003_A05 |
|
|
YMU02 |
|
|
518 |
|
|
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0003_A05. 5' end sequence. |
|
|
DK943495 |
|
|
young leaves |
|
|
CL1Contig3 |
|
|
TATCGTAGCGGGTATAGTTTAGTGGTAAAAGTGTGGCTCGTCTCGCAGTGATTTTGATAG
TTGAGGGATCGTATCTCGGCTAAATTAACTGAAAGAAAAAACTTTATCTTCGCAGAAAAT
ATGTGTTTTCTTATTATTTCTCCAAAATTAGAGGTAGATTAATCAATCTCGTCACTCATT
CATTTCAAGAACTAGGGAAGATAGTGACGAAGCAGAATTGTTTTGGTACCCCAAGAAATA
CTTGGTTTAATTTCTACTTCCGGGGAGATAAATAAAGAAAAAAATCTATGGGTAGACGTC
TAAGATAGCTGACTCATCGTCACTAAACCTCAGAGAATAAATCTGGGAAAGAAAGTTGGA
ATAAATAAATCCGGGTTTGTCAAGATTATTGAACATCTATTTGGTTGAACGGGATCCCTC
GTTTCAACAACTCGGTGAGATATATTTCCCTAAGGGTTTTTTCCTGAAAAAAAAAAAAAA
ATAAAGAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
|
|
- |
|
|
Link to BlastX Result : Swiss-Prot |
|
|
sp|O43114|ORC5_SCHPO Origin recognition complex subunit 5 OS=Schizosaccharomyces pombe |
|
|
57 |
|
|
31.2 |
|
|
2.3 |
|
|
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK943495|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_A05, 5'
(466 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|O43114|ORC5_SCHPO Origin recognition complex subunit 5 OS=Sch... 31 2.3
sp|O51578|EX5B_BORBU Exodeoxyribonuclease V beta chain OS=Borrel... 30 5.2
>sp|O43114|ORC5_SCHPO Origin recognition complex subunit 5
OS=Schizosaccharomyces pombe GN=orc5 PE=1 SV=2
Length = 455
Score = 31.2 bits (69), Expect = 2.3
Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 8/57 (14%)
Frame = +1
Query: 247 LISTSGEINKEKNLWVDV*DS*LIVTKPQRI--------NLGKKVGINKSGFVKIIE 393
L+ T+ +++KE+N+W+++ D + RI ++ K GIN SGF+ ++E
Sbjct: 51 LLRTAFDLSKEENVWINLQDCFTVAHFWYRILIKVGVDKDIALKKGINISGFIYLLE 107
>sp|O51578|EX5B_BORBU Exodeoxyribonuclease V beta chain OS=Borrelia
burgdorferi GN=recB PE=3 SV=1
Length = 1169
Score = 30.0 bits (66), Expect = 5.2
Identities = 19/55 (34%), Positives = 30/55 (54%)
Frame = +1
Query: 217 IVLVPQEILGLISTSGEINKEKNLWVDV*DS*LIVTKPQRINLGKKVGINKSGFV 381
IVL+ + + LI+ +I EKNLW+ + + +TK Q+I K IN G +
Sbjct: 624 IVLLEKNEITLINAINKITFEKNLWIKIAN----ITKDQKIIEWAKNKINYKGLL 674
|
|
|
Link to BlastX Result : TrEMBL |
|
|
tr|A6D2J9|A6D2J9_9VIBR Putative uncharacterized protein OS=Vibrio shilonii AK1 |
|
|
50 |
|
|
35.0 |
|
|
1.8 |
|
|
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK943495|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_A05, 5'
(466 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|A6D2J9|A6D2J9_9VIBR Putative uncharacterized protein OS=Vibri... 35 1.8
tr|Q54CB7|Q54CB7_DICDI Putative uncharacterized protein OS=Dicty... 33 9.4
>tr|A6D2J9|A6D2J9_9VIBR Putative uncharacterized protein OS=Vibrio
shilonii AK1 GN=VSAK1_01567 PE=4 SV=1
Length = 319
Score = 35.0 bits (79), Expect = 1.8
Identities = 16/50 (32%), Positives = 31/50 (62%)
Frame = -3
Query: 188 LK*MSDEID*STSNFGEIIRKHIFSAKIKFFLSVNLAEIRSLNYQNHCET 39
LK +++E+D ST + ++++F A +F+L VNL + R++ Q C +
Sbjct: 234 LKQIANELDISTKSINLFFKEYLFIAPKRFYLLVNLFKFRNILIQGKCSS 283
>tr|Q54CB7|Q54CB7_DICDI Putative uncharacterized protein
OS=Dictyostelium discoideum GN=DDB_0191758 PE=4 SV=1
Length = 955
Score = 32.7 bits (73), Expect = 9.4
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +1
Query: 238 ILGLISTSGEINKEKNLWVDV*DS*LIVTKPQRINLGKKVGINKSGFVKIIEHLF 402
I+G ++ SGE+N E ++ DS +T IN+GK IN S + I F
Sbjct: 745 IIGTLNVSGELNSENGQFIFTLDS---LTNSTFINIGKNATINNSTLIIRINQYF 796
|
|
|
YMU02A01NGRL0003_A07
|
252
|
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0003_A07. 5' end sequence.
|
DK943496
|
CL1Contig5
|
|
|
DK943496
|
|
|
YMU02A01NGRL0003_A07 |
|
|
YMU02 |
|
|
252 |
|
|
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0003_A07. 5' end sequence. |
|
|
DK943496 |
|
|
young leaves |
|
|
CL1Contig5 |
|
|
TAATCGCCTTTATCAATCAACTTCAAGCAATTGGTGTATGTTAATCTATTTTTGGAAATA
TTGAGTTTAAGGATGAAATAACCTCCCTATTAGAACAAAGATATATCCCAAATAAGTATT
TAAATGTTATTTCACGTCAATGTAAGAATTTGACCGATCTTAAAGCATATTGTGAGAGCG
CAAGATACAGGGAATTTCTTAGACTTCCATACCACAAATTTAGAAAAAAAAAAAAAAAAA
AAAAAAAAAAAA |
|
|
- |
|
|
Link to BlastX Result : Swiss-Prot |
|
|
sp|B0K2V6|MTNA_THEPX Methylthioribose-1-phosphate isomerase OS=Thermoanaerobacter sp. (strain X514) |
|
|
21 |
|
|
29.6 |
|
|
4.8 |
|
|
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK943496|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_A07, 5'
(223 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|B0K2V6|MTNA_THEPX Methylthioribose-1-phosphate isomerase OS=T... 30 4.8
sp|B0K8S2|MTNA_THEP3 Methylthioribose-1-phosphate isomerase OS=T... 30 4.8
>sp|B0K2V6|MTNA_THEPX Methylthioribose-1-phosphate isomerase
OS=Thermoanaerobacter sp. (strain X514) GN=mtnA PE=3
SV=1
Length = 345
Score = 29.6 bits (65), Expect = 4.8
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +3
Query: 57 NIEFKDEITSLLEQRYIPNKY 119
+IEFK+E+ L++QR +PN Y
Sbjct: 6 SIEFKNEVLYLIDQRKLPNSY 26
>sp|B0K8S2|MTNA_THEP3 Methylthioribose-1-phosphate isomerase
OS=Thermoanaerobacter pseudethanolicus (strain ATCC
33223 / 39E) GN=mtnA PE=3 SV=1
Length = 345
Score = 29.6 bits (65), Expect = 4.8
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +3
Query: 57 NIEFKDEITSLLEQRYIPNKY 119
+IEFK+E+ L++QR +PN Y
Sbjct: 6 SIEFKNEVLYLIDQRKLPNSY 26
|
|
|
Link to BlastX Result : TrEMBL |
|
|
tr|A8ERA5|A8ERA5_ARCB4 Putative uncharacterized protein OS=Arcobacter butzleri (strain RM4018) |
|
|
39 |
|
|
32.7 |
|
|
9.4 |
|
|
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK943496|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_A07, 5'
(223 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|A8ERA5|A8ERA5_ARCB4 Putative uncharacterized protein OS=Arcob... 33 9.4
>tr|A8ERA5|A8ERA5_ARCB4 Putative uncharacterized protein
OS=Arcobacter butzleri (strain RM4018) GN=Abu_0202 PE=4
SV=1
Length = 430
Score = 32.7 bits (73), Expect = 9.4
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +3
Query: 48 IFGNIEFKDEITSLLEQRYIPNKYLNVISRQCKNLTDLK 164
I+GN FK EI +L+ I NVI ++ NL DLK
Sbjct: 5 IYGNQRFKKEIYKILDSSQIKKIDNNVIIKEISNLNDLK 43
|
|
|
YMU02A01NGRL0003_A08
|
546
|
Adiantum capillus-veneris mRNA similar to 60S ribosomal protein L13a
|
DK943497
|
CL153Contig2
|
|
|
DK943497
|
|
|
YMU02A01NGRL0003_A08 |
|
|
YMU02 |
|
|
546 |
|
|
Adiantum capillus-veneris mRNA similar to 60S ribosomal protein L13a |
|
|
DK943497 |
|
|
young leaves |
|
|
CL153Contig2 |
|
|
CTTTCGCAGTTCTCGTGCAACCCCGGACTGCTAGAGCTCGCAGCGATGGTGTCTGGATCG
GGTCTCTGCGCCCGCGTGGTGGTTGTAGATGCCCGCCACCACATGCTGGGTCGCCTTGCC
TCCATTCTCGCTAAGGAGCTCCTCAACGGCCAGCGTGTGGTAGTGGTTAGGTGTGAGGAG
ATTTGCCTTTCAGGAGGACTTGTAAGGCAAAAGATGAAGTACCTTCGCTTTTTGAGGAAG
CGTATGAACACCAAGCCCAGCAAGGGTCCTATCCACTTTCGTGCCCCGTCTCGAATTTTG
TGGAGAACAATCAGAGGTATGATTCCTCATAAGACAAAGCGAGGAGCTGCAGCGCTTGAG
CGATTGAAGGCATTTGAAGGTGTTCCAGCCCCTTATGACAAGATGAAGAGGATGGTCATT
CCAGATGCCCTCAAGGTTCTAAGGCTCCAGCCTGGGCACAAATATTGCTTGCTTGGTAGG
CTTTCTTCTGAAGTTGGGTGGCACCACTATGATACAATCAAGGAGCTGGAGGAGAGAAGG
AAAGCT |
|
|
- |
|
|
Link to BlastX Result : Swiss-Prot |
|
|
sp|O65055|RL13A_PICMA 60S ribosomal protein L13a OS=Picea mariana |
|
|
167 |
|
|
311.0 |
|
|
1.0e-84 |
|
|
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK943497|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_A08, 5'
(546 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|O65055|RL13A_PICMA 60S ribosomal protein L13a OS=Picea marian... 311 1e-84
sp|Q9FKC0|R13A4_ARATH 60S ribosomal protein L13a-4 OS=Arabidopsi... 304 2e-82
sp|Q9LRX8|R13A2_ARATH 60S ribosomal protein L13a-2 OS=Arabidopsi... 303 4e-82
sp|Q9SFU1|R13A1_ARATH 60S ribosomal protein L13a-1 OS=Arabidopsi... 303 5e-82
sp|Q9SVR0|R13A3_ARATH 60S ribosomal protein L13a-3 OS=Arabidopsi... 301 1e-81
sp|O49885|RL13A_LUPLU 60S ribosomal protein L13a OS=Lupinus lute... 278 2e-74
sp|P93099|RL13A_CYAPA 60S ribosomal protein L13a OS=Cyanophora p... 242 1e-63
sp|Q3SZ90|RL13A_BOVIN 60S ribosomal protein L13a OS=Bos taurus G... 218 2e-56
sp|Q9P720|RL16_NEUCR 60S ribosomal protein L16 OS=Neurospora cra... 218 2e-56
sp|Q5RA38|RL13A_PONAB 60S ribosomal protein L13a OS=Pongo abelii... 217 3e-56
sp|Q4R8Z2|RL13A_MACFA 60S ribosomal protein L13a OS=Macaca fasci... 217 3e-56
sp|P40429|RL13A_HUMAN 60S ribosomal protein L13a OS=Homo sapiens... 217 3e-56
sp|P35427|RL13A_RAT 60S ribosomal protein L13a OS=Rattus norvegi... 216 6e-56
sp|P19253|RL13A_MOUSE 60S ribosomal protein L13a OS=Mus musculus... 216 8e-56
sp|Q9VNE9|RL13A_DROME 60S ribosomal protein L13a OS=Drosophila m... 214 3e-55
sp|O42848|RL16A_SCHPO 60S ribosomal protein L16-A OS=Schizosacch... 213 6e-55
sp|O42991|RL16B_SCHPO 60S ribosomal protein L16-B OS=Schizosacch... 212 8e-55
sp|Q962U0|RL13A_SPOFR 60S ribosomal protein L13a OS=Spodoptera f... 210 4e-54
sp|Q91487|RL13A_SALTR 60S ribosomal protein L13a (Fragment) OS=S... 207 2e-53
sp|Q8MUR4|RL13A_CHOPR 60S ribosomal protein L13a OS=Choristoneur... 206 6e-53
sp|O43004|RL16C_SCHPO 60S ribosomal protein L16-C OS=Schizosacch... 201 2e-51
sp|P26785|RL16B_YEAST 60S ribosomal protein L16-B OS=Saccharomyc... 200 4e-51
sp|P26784|RL16A_YEAST 60S ribosomal protein L16-A OS=Saccharomyc... 198 1e-50
sp|Q95307|RL13A_PIG 60S ribosomal protein L13a (Fragment) OS=Sus... 194 3e-49
sp|Q27389|RL13A_CAEEL 60S ribosomal protein L13a OS=Caenorhabdit... 190 3e-48
sp|Q553M7|RL13A_DICDI 60S ribosomal protein L13a OS=Dictyosteliu... 187 3e-47
sp|O29137|RL13_ARCFU 50S ribosomal protein L13P OS=Archaeoglobus... 92 2e-18
sp|Q6NVV1|R13AX_HUMAN Putative 60S ribosomal protein L13a-like M... 92 2e-18
sp|Q8TT43|RL13_METAC 50S ribosomal protein L13P OS=Methanosarcin... 90 6e-18
sp|Q46CK6|RL13_METBF 50S ribosomal protein L13P OS=Methanosarcin... 88 2e-17
>sp|O65055|RL13A_PICMA 60S ribosomal protein L13a OS=Picea mariana
GN=RPL13A PE=2 SV=1
Length = 206
Score = 311 bits (798), Expect = 1e-84
Identities = 151/167 (90%), Positives = 159/167 (95%)
Frame = +1
Query: 46 MVSGSGLCARVVVVDARHHMLGRLASILAKELLNGQRVVVVRCEEICLSGGLVRQKMKYL 225
MVSGSG+CA+ VVVDARHHMLGRLASILAKELL+GQRVVVVRCEEIC+SGGLVRQKMKYL
Sbjct: 1 MVSGSGICAKEVVVDARHHMLGRLASILAKELLHGQRVVVVRCEEICMSGGLVRQKMKYL 60
Query: 226 RFLRKRMNTKPSKGPIHFRAPSRILWRTIRGMIPHKTKRGAAALERLKAFEGVPAPYDKM 405
RFLRKRMNTKPS GPIHFRAPSRILWRTIRGMIPHKTKRGAAAL L+AFEGVP PYD+
Sbjct: 61 RFLRKRMNTKPSHGPIHFRAPSRILWRTIRGMIPHKTKRGAAALATLRAFEGVPPPYDRK 120
Query: 406 KRMVIPDALKVLRLQPGHKYCLLGRLSSEVGWHHYDTIKELEERRKA 546
KRMVIPDALKVLRLQPGHKYCLLGRLS EVGWHH+DTI ELEE+RKA
Sbjct: 121 KRMVIPDALKVLRLQPGHKYCLLGRLSKEVGWHHFDTITELEEKRKA 167
>sp|Q9FKC0|R13A4_ARATH 60S ribosomal protein L13a-4 OS=Arabidopsis
thaliana GN=RPL13AD PE=2 SV=1
Length = 206
Score = 304 bits (779), Expect = 2e-82
Identities = 145/166 (87%), Positives = 157/166 (94%)
Frame = +1
Query: 46 MVSGSGLCARVVVVDARHHMLGRLASILAKELLNGQRVVVVRCEEICLSGGLVRQKMKYL 225
MVSGSG+C++ VVVDARHHMLGRLASI AKELLNGQ+VV+VRCEEICLSGGLVRQKMKY+
Sbjct: 1 MVSGSGICSKRVVVDARHHMLGRLASITAKELLNGQKVVIVRCEEICLSGGLVRQKMKYM 60
Query: 226 RFLRKRMNTKPSKGPIHFRAPSRILWRTIRGMIPHKTKRGAAALERLKAFEGVPAPYDKM 405
RFLRKRMNTKPS GPIHFRAPS+I WRT+RGMIPHKTKRGAAAL RLK +EGVP PYDK+
Sbjct: 61 RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVYEGVPTPYDKI 120
Query: 406 KRMVIPDALKVLRLQPGHKYCLLGRLSSEVGWHHYDTIKELEERRK 543
KRMVIPDALKVLRLQ GHKYCLLGRLSSEVGW+HYDTIKELE +RK
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELETKRK 166
>sp|Q9LRX8|R13A2_ARATH 60S ribosomal protein L13a-2 OS=Arabidopsis
thaliana GN=RPL13AB PE=2 SV=1
Length = 206
Score = 303 bits (776), Expect = 4e-82
Identities = 146/166 (87%), Positives = 156/166 (93%)
Frame = +1
Query: 46 MVSGSGLCARVVVVDARHHMLGRLASILAKELLNGQRVVVVRCEEICLSGGLVRQKMKYL 225
MVSGSG+C++ VVVDARHHM GRLASI+AKELLNGQ VVVVRCEEICLSGGLVRQKMKY+
Sbjct: 1 MVSGSGICSKRVVVDARHHMCGRLASIIAKELLNGQSVVVVRCEEICLSGGLVRQKMKYM 60
Query: 226 RFLRKRMNTKPSKGPIHFRAPSRILWRTIRGMIPHKTKRGAAALERLKAFEGVPAPYDKM 405
RFLRKRMNTKPS GPIHFRAPS+I WRT+RGMIPHKTKRGAAAL RLK FEGVP PYDK+
Sbjct: 61 RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVFEGVPPPYDKV 120
Query: 406 KRMVIPDALKVLRLQPGHKYCLLGRLSSEVGWHHYDTIKELEERRK 543
KRMVIPDALKVLRLQ GHKYCLLGRLSSEVGW+HYDTIKELE +RK
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELEVKRK 166
>sp|Q9SFU1|R13A1_ARATH 60S ribosomal protein L13a-1 OS=Arabidopsis
thaliana GN=RPL13AA PE=2 SV=1
Length = 206
Score = 303 bits (775), Expect = 5e-82
Identities = 143/166 (86%), Positives = 156/166 (93%)
Frame = +1
Query: 46 MVSGSGLCARVVVVDARHHMLGRLASILAKELLNGQRVVVVRCEEICLSGGLVRQKMKYL 225
MVSGSG+CA+ VVVDARHHMLGRLAS++AK+LLNGQ +VVVRCEEICLSGGLVRQKMKY+
Sbjct: 1 MVSGSGICAKRVVVDARHHMLGRLASVVAKDLLNGQNIVVVRCEEICLSGGLVRQKMKYM 60
Query: 226 RFLRKRMNTKPSKGPIHFRAPSRILWRTIRGMIPHKTKRGAAALERLKAFEGVPAPYDKM 405
RFLRKRMNTKPS GPIHFRAPS+I WRT+RGMIPHKTKRGA AL RLK FEGVP PYDK+
Sbjct: 61 RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGANALARLKVFEGVPTPYDKI 120
Query: 406 KRMVIPDALKVLRLQPGHKYCLLGRLSSEVGWHHYDTIKELEERRK 543
KRMV+PDALKVLRLQ GHKYCLLGRLSSEVGW+HYDTIKELE +RK
Sbjct: 121 KRMVVPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIKELENKRK 166
>sp|Q9SVR0|R13A3_ARATH 60S ribosomal protein L13a-3 OS=Arabidopsis
thaliana GN=RPL13AC PE=2 SV=1
Length = 206
Score = 301 bits (771), Expect = 1e-81
Identities = 145/166 (87%), Positives = 154/166 (92%)
Frame = +1
Query: 46 MVSGSGLCARVVVVDARHHMLGRLASILAKELLNGQRVVVVRCEEICLSGGLVRQKMKYL 225
MVSGSG+CA+ VVVD RHHMLGRLAS AKELLNGQ VVVVRCEEICLSGGLVRQKMKY+
Sbjct: 1 MVSGSGICAKRVVVDGRHHMLGRLASNTAKELLNGQEVVVVRCEEICLSGGLVRQKMKYM 60
Query: 226 RFLRKRMNTKPSKGPIHFRAPSRILWRTIRGMIPHKTKRGAAALERLKAFEGVPAPYDKM 405
RFLRKRMNTKPS GPIHFRAPS+I WRT+RGMIPHKTKRGAAAL RLK FEG+P PYDK+
Sbjct: 61 RFLRKRMNTKPSHGPIHFRAPSKIFWRTVRGMIPHKTKRGAAALARLKVFEGIPPPYDKI 120
Query: 406 KRMVIPDALKVLRLQPGHKYCLLGRLSSEVGWHHYDTIKELEERRK 543
KRMVIPDALKVLRLQ GHKYCLLGRLSSEVGW+HYDTIKELE +RK
Sbjct: 121 KRMVIPDALKVLRLQSGHKYCLLGRLSSEVGWNHYDTIKELETKRK 166
>sp|O49885|RL13A_LUPLU 60S ribosomal protein L13a OS=Lupinus luteus
GN=RPL13A PE=2 SV=1
Length = 205
Score = 278 bits (710), Expect = 2e-74
Identities = 134/166 (80%), Positives = 152/166 (91%)
Frame = +1
Query: 46 MVSGSGLCARVVVVDARHHMLGRLASILAKELLNGQRVVVVRCEEICLSGGLVRQKMKYL 225
MVSGSG+ A+ VVVDARHHMLGRLASI+AKELLNGQ+VV+VR EEIC+SGGLVRQKMKYL
Sbjct: 1 MVSGSGIAAKRVVVDARHHMLGRLASIVAKELLNGQKVVIVRSEEICISGGLVRQKMKYL 60
Query: 226 RFLRKRMNTKPSKGPIHFRAPSRILWRTIRGMIPHKTKRGAAALERLKAFEGVPAPYDKM 405
RFLRKRMNTKPS GPIH APS+I WRT+RGMIPHKTKRG AL RLK +EG+P P+DK
Sbjct: 61 RFLRKRMNTKPSHGPIHC-APSKIFWRTVRGMIPHKTKRGEHALARLKVYEGIPPPFDKQ 119
Query: 406 KRMVIPDALKVLRLQPGHKYCLLGRLSSEVGWHHYDTIKELEERRK 543
KR+V+PDALKVLRLQ GHKYCLLG+LSSEVGW++YDTIKELE++RK
Sbjct: 120 KRLVVPDALKVLRLQKGHKYCLLGQLSSEVGWNYYDTIKELEKKRK 165
>sp|P93099|RL13A_CYAPA 60S ribosomal protein L13a OS=Cyanophora
paradoxa PE=2 SV=1
Length = 200
Score = 242 bits (617), Expect = 1e-63
Identities = 116/157 (73%), Positives = 134/157 (85%)
Frame = +1
Query: 73 RVVVVDARHHMLGRLASILAKELLNGQRVVVVRCEEICLSGGLVRQKMKYLRFLRKRMNT 252
+VVVVD R H+LGRLA+ LAKELLNGQRVV VR EEI +SG L R K+K+ FL+KRMNT
Sbjct: 4 KVVVVDCRGHLLGRLAATLAKELLNGQRVVAVRTEEINISGSLFRNKLKFHAFLKKRMNT 63
Query: 253 KPSKGPIHFRAPSRILWRTIRGMIPHKTKRGAAALERLKAFEGVPAPYDKMKRMVIPDAL 432
P +GP HFR+P+RILWRTIRGMIPHKT RGAAALERLKAFEGVP PYDKMKRMVIP AL
Sbjct: 64 NPRRGPFHFRSPARILWRTIRGMIPHKTPRGAAALERLKAFEGVPPPYDKMKRMVIPQAL 123
Query: 433 KVLRLQPGHKYCLLGRLSSEVGWHHYDTIKELEERRK 543
+VLRL+PG K+C+LGRL++EVGW H D + LEE+RK
Sbjct: 124 RVLRLKPGRKFCVLGRLATEVGWRHSDLVTRLEEKRK 160
>sp|Q3SZ90|RL13A_BOVIN 60S ribosomal protein L13a OS=Bos taurus
GN=RPL13A PE=2 SV=3
Length = 203
Score = 218 bits (555), Expect = 2e-56
Identities = 103/157 (65%), Positives = 127/157 (80%)
Frame = +1
Query: 73 RVVVVDARHHMLGRLASILAKELLNGQRVVVVRCEEICLSGGLVRQKMKYLRFLRKRMNT 252
+V+V+D R H+LGRLA+I+AK++L G++VVVVRCE I +SG R K+KYL FLRKRMNT
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 253 KPSKGPIHFRAPSRILWRTIRGMIPHKTKRGAAALERLKAFEGVPAPYDKMKRMVIPDAL 432
PS+GP HFRAPSRI WRT+RGM+PHKTKRG AALERLK F+G+P PYDK KRMV+P AL
Sbjct: 65 NPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALERLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 433 KVLRLQPGHKYCLLGRLSSEVGWHHYDTIKELEERRK 543
KV+RL+P K+ LGRL+ EVGW + LEE+RK
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRK 161
>sp|Q9P720|RL16_NEUCR 60S ribosomal protein L16 OS=Neurospora crassa
GN=rpl-16 PE=3 SV=1
Length = 202
Score = 218 bits (554), Expect = 2e-56
Identities = 104/158 (65%), Positives = 127/158 (80%), Gaps = 1/158 (0%)
Frame = +1
Query: 76 VVVVDARHHMLGRLASILAKELLNGQRVVVVRCEEICLSGGLVRQKMKYLRFLRKRMNTK 255
VVV+D + H+LGRLASI+AK+LLNGQ++VVVRCE + +SG R K+KY +LRK
Sbjct: 7 VVVIDGKGHLLGRLASIVAKQLLNGQKIVVVRCEALNISGEFFRAKLKYHSYLRKMTRYN 66
Query: 256 PSKG-PIHFRAPSRILWRTIRGMIPHKTKRGAAALERLKAFEGVPAPYDKMKRMVIPDAL 432
P++G P HFRAPSRI ++ +RGMIPHKT RGAAALERLK FEGVP PYDK K+MV+P AL
Sbjct: 67 PTRGGPFHFRAPSRIFYKAVRGMIPHKTARGAAALERLKVFEGVPPPYDKKKKMVVPQAL 126
Query: 433 KVLRLQPGHKYCLLGRLSSEVGWHHYDTIKELEERRKA 546
+VLRLQPG K+C +GRLSSEVGW + D + LEERRKA
Sbjct: 127 RVLRLQPGRKFCTVGRLSSEVGWKYEDVVSRLEERRKA 164
>sp|Q5RA38|RL13A_PONAB 60S ribosomal protein L13a OS=Pongo abelii
GN=RPL13A PE=2 SV=3
Length = 203
Score = 217 bits (552), Expect = 3e-56
Identities = 102/157 (64%), Positives = 127/157 (80%)
Frame = +1
Query: 73 RVVVVDARHHMLGRLASILAKELLNGQRVVVVRCEEICLSGGLVRQKMKYLRFLRKRMNT 252
+V+V+D R H+LGRLA+I+AK++L G++VVVVRCE I +SG R K+KYL FLRKRMNT
Sbjct: 5 QVLVLDGRGHLLGRLAAIVAKQVLLGRKVVVVRCEGINISGNFYRNKLKYLAFLRKRMNT 64
Query: 253 KPSKGPIHFRAPSRILWRTIRGMIPHKTKRGAAALERLKAFEGVPAPYDKMKRMVIPDAL 432
PS+GP HFRAPSRI WRT+RGM+PHKTKRG AAL+RLK F+G+P PYDK KRMV+P AL
Sbjct: 65 SPSRGPYHFRAPSRIFWRTVRGMLPHKTKRGQAALDRLKVFDGIPPPYDKKKRMVVPAAL 124
Query: 433 KVLRLQPGHKYCLLGRLSSEVGWHHYDTIKELEERRK 543
KV+RL+P K+ LGRL+ EVGW + LEE+RK
Sbjct: 125 KVVRLKPTRKFAYLGRLAHEVGWKYQAVTATLEEKRK 161
|
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Link to BlastX Result : TrEMBL |
|
|
tr|A9T6N0|A9T6N0_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
|
|
167 |
|
|
330.0 |
|
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4.0e-89 |
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BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK943497|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_A08, 5'
(546 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|A9T6N0|A9T6N0_PHYPA Predicted protein OS=Physcomitrella paten... 330 4e-89
tr|A9SBR7|A9SBR7_PHYPA Predicted protein OS=Physcomitrella paten... 329 5e-89
tr|A9SGB5|A9SGB5_PHYPA Predicted protein OS=Physcomitrella paten... 328 1e-88
tr|A9SHV1|A9SHV1_PHYPA Predicted protein OS=Physcomitrella paten... 325 1e-87
tr|A9T4V2|A9T4V2_PHYPA Predicted protein OS=Physcomitrella paten... 325 1e-87
tr|A9NNL7|A9NNL7_PICSI Putative uncharacterized protein OS=Picea... 314 2e-84
tr|A5BL45|A5BL45_VITVI Putative uncharacterized protein (Chromos... 313 4e-84
tr|A7QAC2|A7QAC2_VITVI Chromosome undetermined scaffold_70, whol... 311 2e-83
tr|A9PB37|A9PB37_POPTR Putative uncharacterized protein OS=Popul... 308 9e-83
tr|A9PHS9|A9PHS9_POPTR Putative uncharacterized protein OS=Popul... 308 1e-82
tr|Q6RH10|Q6RH10_CAPAN 60S ribosomal protein L13a OS=Capsicum an... 307 3e-82
tr|Q3HRW1|Q3HRW1_SOLTU 60S ribosomal protein L13a-like protein O... 306 5e-82
tr|B3TLQ7|B3TLQ7_ELAGV Ribosomal protein L13a OS=Elaeis guineens... 304 2e-81
tr|B6VC51|B6VC51_VERFO 60S ribosomal protein L13A OS=Vernicia fo... 304 2e-81
tr|Q75J18|Q75J18_ORYSJ Os03g0756000 protein OS=Oryza sativa subs... 301 1e-80
tr|A9P8J0|A9P8J0_POPTR Putative uncharacterized protein OS=Popul... 301 1e-80
tr|A2XM46|A2XM46_ORYSI Putative uncharacterized protein OS=Oryza... 301 1e-80
tr|B6SJA0|B6SJA0_MAIZE 60S ribosomal protein L13a OS=Zea mays PE... 299 6e-80
tr|B4FAM6|B4FAM6_MAIZE Putative uncharacterized protein OS=Zea m... 299 6e-80
tr|Q8LKU3|Q8LKU3_SORBI Putative 60S ribosomal protein OS=Sorghum... 299 7e-80
tr|Q2V3X8|Q2V3X8_ARATH Uncharacterized protein At3g07110.2 OS=Ar... 298 1e-79
tr|Q5I7L1|Q5I7L1_WHEAT Ribosomal protein L13a OS=Triticum aestiv... 297 2e-79
tr|B6TG85|B6TG85_MAIZE 60S ribosomal protein L13a OS=Zea mays PE... 297 2e-79
tr|B6SM32|B6SM32_MAIZE 60S ribosomal protein L13a OS=Zea mays PE... 297 2e-79
tr|Q7F225|Q7F225_ORYSJ Os07g0109500 protein OS=Oryza sativa subs... 297 3e-79
tr|A3BFV7|A3BFV7_ORYSJ Putative uncharacterized protein OS=Oryza... 297 3e-79
tr|A2YHF9|A2YHF9_ORYSI Putative uncharacterized protein OS=Oryza... 297 3e-79
tr|B6T8P1|B6T8P1_MAIZE 60S ribosomal protein L13a OS=Zea mays PE... 296 5e-79
tr|B6TKD3|B6TKD3_MAIZE 60S ribosomal protein L13a OS=Zea mays PE... 296 6e-79
tr|B6UGM0|B6UGM0_MAIZE 60S ribosomal protein L13a OS=Zea mays PE... 291 1e-77
>tr|A9T6N0|A9T6N0_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_219408 PE=4 SV=1
Length = 208
Score = 330 bits (845), Expect = 4e-89
Identities = 160/167 (95%), Positives = 166/167 (99%)
Frame = +1
Query: 46 MVSGSGLCARVVVVDARHHMLGRLASILAKELLNGQRVVVVRCEEICLSGGLVRQKMKYL 225
MVSGSGLCA+VVVVDARHHMLGRLASILAKELLNGQ+VVVVRCEEICLSGGLVRQKMKYL
Sbjct: 1 MVSGSGLCAKVVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICLSGGLVRQKMKYL 60
Query: 226 RFLRKRMNTKPSKGPIHFRAPSRILWRTIRGMIPHKTKRGAAALERLKAFEGVPAPYDKM 405
RFLRKRMNTKPSKGPIHFR+P+RILWRTIRGMIPHKTKRGAAALERLKAFEGVPAPYDKM
Sbjct: 61 RFLRKRMNTKPSKGPIHFRSPARILWRTIRGMIPHKTKRGAAALERLKAFEGVPAPYDKM 120
Query: 406 KRMVIPDALKVLRLQPGHKYCLLGRLSSEVGWHHYDTIKELEERRKA 546
KRMVIPDALKVLRLQPGHK+CLLGRLS EVGWHHYDTIKELEE+RKA
Sbjct: 121 KRMVIPDALKVLRLQPGHKFCLLGRLSEEVGWHHYDTIKELEEKRKA 167
>tr|A9SBR7|A9SBR7_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_183175 PE=3 SV=1
Length = 208
Score = 329 bits (844), Expect = 5e-89
Identities = 159/167 (95%), Positives = 166/167 (99%)
Frame = +1
Query: 46 MVSGSGLCARVVVVDARHHMLGRLASILAKELLNGQRVVVVRCEEICLSGGLVRQKMKYL 225
MVSGSGLCA+VVVVDARHHMLGRLASILAKELLNGQ++VVVRCEEICLSGGLVRQKMKYL
Sbjct: 1 MVSGSGLCAKVVVVDARHHMLGRLASILAKELLNGQKIVVVRCEEICLSGGLVRQKMKYL 60
Query: 226 RFLRKRMNTKPSKGPIHFRAPSRILWRTIRGMIPHKTKRGAAALERLKAFEGVPAPYDKM 405
RFLRKRMNTKPSKGPIHFR+P+RILWRTIRGMIPHKTKRGAAALERLKAFEGVPAPYDKM
Sbjct: 61 RFLRKRMNTKPSKGPIHFRSPARILWRTIRGMIPHKTKRGAAALERLKAFEGVPAPYDKM 120
Query: 406 KRMVIPDALKVLRLQPGHKYCLLGRLSSEVGWHHYDTIKELEERRKA 546
KRMVIPDALKVLRLQPGHK+CLLGRLS EVGWHHYDTIKELEE+RKA
Sbjct: 121 KRMVIPDALKVLRLQPGHKFCLLGRLSEEVGWHHYDTIKELEEKRKA 167
>tr|A9SGB5|A9SGB5_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_184654 PE=3 SV=1
Length = 208
Score = 328 bits (841), Expect = 1e-88
Identities = 159/167 (95%), Positives = 166/167 (99%)
Frame = +1
Query: 46 MVSGSGLCARVVVVDARHHMLGRLASILAKELLNGQRVVVVRCEEICLSGGLVRQKMKYL 225
MVSGSGLCA+VVVVDARHHMLGRLASILAKELLNGQ+VVVVRCEEICLSGGLVRQKMKYL
Sbjct: 1 MVSGSGLCAKVVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICLSGGLVRQKMKYL 60
Query: 226 RFLRKRMNTKPSKGPIHFRAPSRILWRTIRGMIPHKTKRGAAALERLKAFEGVPAPYDKM 405
RFLRKRMNTKPSKGPIHFR+P+RILWRTIRGMIPHKTKRGAAALERLKAFEGVPAPYDKM
Sbjct: 61 RFLRKRMNTKPSKGPIHFRSPARILWRTIRGMIPHKTKRGAAALERLKAFEGVPAPYDKM 120
Query: 406 KRMVIPDALKVLRLQPGHKYCLLGRLSSEVGWHHYDTIKELEERRKA 546
KRMVIPDALKVLRL+PGHK+CLLGRLS EVGWHHYDTIKELEE+RKA
Sbjct: 121 KRMVIPDALKVLRLKPGHKFCLLGRLSEEVGWHHYDTIKELEEKRKA 167
>tr|A9SHV1|A9SHV1_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_106471 PE=3 SV=1
Length = 208
Score = 325 bits (833), Expect = 1e-87
Identities = 158/167 (94%), Positives = 165/167 (98%)
Frame = +1
Query: 46 MVSGSGLCARVVVVDARHHMLGRLASILAKELLNGQRVVVVRCEEICLSGGLVRQKMKYL 225
MVSGSG+CA+VVVVDARHHMLGRLASILAKELLNGQ+VVVVR EEICLSGGLVRQKMKYL
Sbjct: 1 MVSGSGICAKVVVVDARHHMLGRLASILAKELLNGQKVVVVRSEEICLSGGLVRQKMKYL 60
Query: 226 RFLRKRMNTKPSKGPIHFRAPSRILWRTIRGMIPHKTKRGAAALERLKAFEGVPAPYDKM 405
RFLRKRMNTKPSKGPIHFR+P+RILWRTIRGMIPHKTKRGAAALERLKAFEGVPAPYDKM
Sbjct: 61 RFLRKRMNTKPSKGPIHFRSPARILWRTIRGMIPHKTKRGAAALERLKAFEGVPAPYDKM 120
Query: 406 KRMVIPDALKVLRLQPGHKYCLLGRLSSEVGWHHYDTIKELEERRKA 546
KRMVIPDALKVLRLQPGHK+CLLGRLS EVGWHHYDTIKELEE+RKA
Sbjct: 121 KRMVIPDALKVLRLQPGHKFCLLGRLSEEVGWHHYDTIKELEEKRKA 167
>tr|A9T4V2|A9T4V2_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_191622 PE=3 SV=1
Length = 208
Score = 325 bits (832), Expect = 1e-87
Identities = 158/167 (94%), Positives = 165/167 (98%)
Frame = +1
Query: 46 MVSGSGLCARVVVVDARHHMLGRLASILAKELLNGQRVVVVRCEEICLSGGLVRQKMKYL 225
MVSGSGLCA+VVVVDARHHMLGRLASIL+KELLNGQ+VVVVR EEICLSGGLVRQKMKYL
Sbjct: 1 MVSGSGLCAKVVVVDARHHMLGRLASILSKELLNGQKVVVVRSEEICLSGGLVRQKMKYL 60
Query: 226 RFLRKRMNTKPSKGPIHFRAPSRILWRTIRGMIPHKTKRGAAALERLKAFEGVPAPYDKM 405
RFLRKRMNTKPSKGPIHFR+P+RILWRTIRGMIPHKTKRGAAALERLKAFEGVPAPYDKM
Sbjct: 61 RFLRKRMNTKPSKGPIHFRSPARILWRTIRGMIPHKTKRGAAALERLKAFEGVPAPYDKM 120
Query: 406 KRMVIPDALKVLRLQPGHKYCLLGRLSSEVGWHHYDTIKELEERRKA 546
KRMVIPDALKVLRLQPGHK+CLLGRLS EVGWHHYDTIKELEE+RKA
Sbjct: 121 KRMVIPDALKVLRLQPGHKFCLLGRLSEEVGWHHYDTIKELEEKRKA 167
>tr|A9NNL7|A9NNL7_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 206
Score = 314 bits (804), Expect = 2e-84
Identities = 152/167 (91%), Positives = 160/167 (95%)
Frame = +1
Query: 46 MVSGSGLCARVVVVDARHHMLGRLASILAKELLNGQRVVVVRCEEICLSGGLVRQKMKYL 225
MVSGSG+CA+ VVVDARHHMLGRLASILAKELL+GQRVVVVRCEEIC+SGGLVRQKMKYL
Sbjct: 1 MVSGSGICAKEVVVDARHHMLGRLASILAKELLHGQRVVVVRCEEICMSGGLVRQKMKYL 60
Query: 226 RFLRKRMNTKPSKGPIHFRAPSRILWRTIRGMIPHKTKRGAAALERLKAFEGVPAPYDKM 405
RFLRKRMNTKPS GPIHFRAPSRILWRTIRGMIPHKTKRGAAAL RL+AFEGVP PYD+
Sbjct: 61 RFLRKRMNTKPSHGPIHFRAPSRILWRTIRGMIPHKTKRGAAALARLRAFEGVPPPYDRK 120
Query: 406 KRMVIPDALKVLRLQPGHKYCLLGRLSSEVGWHHYDTIKELEERRKA 546
KRMVIPDALKVLRLQPGHKYCLLGRLS EVGWHH+DTI ELEE+RKA
Sbjct: 121 KRMVIPDALKVLRLQPGHKYCLLGRLSKEVGWHHFDTITELEEKRKA 167
>tr|A5BL45|A5BL45_VITVI Putative uncharacterized protein (Chromosome
chr5 scaffold_58, whole genome shotgun sequence)
OS=Vitis vinifera GN=GSVIVT00031707001 PE=3 SV=1
Length = 206
Score = 313 bits (802), Expect = 4e-84
Identities = 152/166 (91%), Positives = 161/166 (96%)
Frame = +1
Query: 46 MVSGSGLCARVVVVDARHHMLGRLASILAKELLNGQRVVVVRCEEICLSGGLVRQKMKYL 225
MVSGSG+CAR VVVDARHHMLGRLASILAKELLNGQ+VVVVRCEEICLSGGLVRQKMKYL
Sbjct: 1 MVSGSGICARRVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICLSGGLVRQKMKYL 60
Query: 226 RFLRKRMNTKPSKGPIHFRAPSRILWRTIRGMIPHKTKRGAAALERLKAFEGVPAPYDKM 405
RFLRKRMNTKPS GPIHFRAPS+ILWRTIRGMIPHKTKRGAAAL RLKA+EG+P PYDKM
Sbjct: 61 RFLRKRMNTKPSHGPIHFRAPSKILWRTIRGMIPHKTKRGAAALARLKAYEGIPPPYDKM 120
Query: 406 KRMVIPDALKVLRLQPGHKYCLLGRLSSEVGWHHYDTIKELEERRK 543
KRMVIPDALKVLRLQ GHKYCLLGRLSSEVGW+HY+TIKELE++RK
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYETIKELEKKRK 166
>tr|A7QAC2|A7QAC2_VITVI Chromosome undetermined scaffold_70, whole
genome shotgun sequence OS=Vitis vinifera
GN=GSVIVT00033857001 PE=3 SV=1
Length = 206
Score = 311 bits (796), Expect = 2e-83
Identities = 151/166 (90%), Positives = 160/166 (96%)
Frame = +1
Query: 46 MVSGSGLCARVVVVDARHHMLGRLASILAKELLNGQRVVVVRCEEICLSGGLVRQKMKYL 225
MVSGSG+CA VVVDARHHMLGRLASILAKELLNGQ+VVVVRCEEICLSGGLVRQKMKYL
Sbjct: 1 MVSGSGICAGRVVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICLSGGLVRQKMKYL 60
Query: 226 RFLRKRMNTKPSKGPIHFRAPSRILWRTIRGMIPHKTKRGAAALERLKAFEGVPAPYDKM 405
RFLRKRMNTKPS GPIHFRAPS+ILWRTIRGMIPHKTKRGAAAL RLKA+EG+P PYDKM
Sbjct: 61 RFLRKRMNTKPSHGPIHFRAPSKILWRTIRGMIPHKTKRGAAALARLKAYEGIPPPYDKM 120
Query: 406 KRMVIPDALKVLRLQPGHKYCLLGRLSSEVGWHHYDTIKELEERRK 543
KRMVIPDALKVLRLQ GHKYCLLGRLSSEVGW+HYDTI+ELE++RK
Sbjct: 121 KRMVIPDALKVLRLQAGHKYCLLGRLSSEVGWNHYDTIRELEKKRK 166
>tr|A9PB37|A9PB37_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=2 SV=1
Length = 206
Score = 308 bits (790), Expect = 9e-83
Identities = 149/166 (89%), Positives = 158/166 (95%)
Frame = +1
Query: 46 MVSGSGLCARVVVVDARHHMLGRLASILAKELLNGQRVVVVRCEEICLSGGLVRQKMKYL 225
MVSGSG+CA+ +VVDARHHMLGRLASILAKELLNGQ+VVVVRCEEIC+SGGLVRQKMKYL
Sbjct: 1 MVSGSGICAKRIVVDARHHMLGRLASILAKELLNGQKVVVVRCEEICISGGLVRQKMKYL 60
Query: 226 RFLRKRMNTKPSKGPIHFRAPSRILWRTIRGMIPHKTKRGAAALERLKAFEGVPAPYDKM 405
RFLRKRMNTKPS GPIHFRAPS+ILWRTIRGMIPHKTKRG AAL RLK FEGVP PYDK
Sbjct: 61 RFLRKRMNTKPSHGPIHFRAPSKILWRTIRGMIPHKTKRGEAALARLKVFEGVPPPYDKT 120
Query: 406 KRMVIPDALKVLRLQPGHKYCLLGRLSSEVGWHHYDTIKELEERRK 543
KRMVIPDALKVLRLQPGHKYCLLG+LSSEVGW+HYDTIKELE +RK
Sbjct: 121 KRMVIPDALKVLRLQPGHKYCLLGQLSSEVGWNHYDTIKELEMKRK 166
>tr|A9PHS9|A9PHS9_POPTR Putative uncharacterized protein OS=Populus
trichocarpa PE=2 SV=1
Length = 206
Score = 308 bits (789), Expect = 1e-82
Identities = 149/166 (89%), Positives = 157/166 (94%)
Frame = +1
Query: 46 MVSGSGLCARVVVVDARHHMLGRLASILAKELLNGQRVVVVRCEEICLSGGLVRQKMKYL 225
MVSGSG+C + VVVDARHHMLGRLASI+AKELLNGQRVVVVRCEEIC+SGGLVRQKMKYL
Sbjct: 1 MVSGSGICVKRVVVDARHHMLGRLASIIAKELLNGQRVVVVRCEEICISGGLVRQKMKYL 60
Query: 226 RFLRKRMNTKPSKGPIHFRAPSRILWRTIRGMIPHKTKRGAAALERLKAFEGVPAPYDKM 405
RFLRKRMNTKPS GPIHFRAPS+ILWRTIRGMIPHKTKRG AAL RLK FEGVP PYDK
Sbjct: 61 RFLRKRMNTKPSHGPIHFRAPSKILWRTIRGMIPHKTKRGEAALARLKVFEGVPPPYDKT 120
Query: 406 KRMVIPDALKVLRLQPGHKYCLLGRLSSEVGWHHYDTIKELEERRK 543
KRMVIPDALKVLRLQPGHKYCLLG+LSSEVGW+HYDTIKELE +RK
Sbjct: 121 KRMVIPDALKVLRLQPGHKYCLLGQLSSEVGWNHYDTIKELETKRK 166
|
|
|
YMU02A01NGRL0003_A09
|
496
|
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0003_A09. 5' end sequence.
|
DK943498
|
CL1Contig3
|
|
|
DK943498
|
|
|
YMU02A01NGRL0003_A09 |
|
|
YMU02 |
|
|
496 |
|
|
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0003_A09. 5' end sequence. |
|
|
DK943498 |
|
|
young leaves |
|
|
CL1Contig3 |
|
|
TATCGTAGCGGGTATAGTTTAGTGGTAAAAGTGTGACTCGTCTCGCAGTGATTTTGATAG
TTGAGGGATCGTATCTCGGCTAAATTAACTGAAAGAAAAAACTTTATCTTCGCAGAAAAT
ATGTGTTTTCTTATTATTTCTCCAAAATTAGAGGTAGATTAATCAATCTCGTCACTCATT
CATTTCAAGAACTAGGGAAGATAGTGACGAAGCAGAATTGTTTTGGTACCCCAAGAAATA
CTTGGTTTAATTTCTACTTCCGGGGAGATAAATAAAGAAAAAAATCTATGGGTAGACGTC
TAAGATAGCTGACTCATCGTCACTAAACCTCAGAGAATAAATCTGGGAAAGAAAGTTGGA
ATAAATAAATCCGGGTTTGTCAAGATTATTGAACATCTATTTGGTTGAACGGGATCCCTC
GTTTCAACAACTCGGTGAGATATATTTCCCTAAGGGTTTTTTCCTGAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAA |
|
|
- |
|
|
Link to BlastX Result : Swiss-Prot |
|
|
sp|O43114|ORC5_SCHPO Origin recognition complex subunit 5 OS=Schizosaccharomyces pombe |
|
|
57 |
|
|
31.2 |
|
|
2.3 |
|
|
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK943498|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_A09, 5'
(466 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|O43114|ORC5_SCHPO Origin recognition complex subunit 5 OS=Sch... 31 2.3
sp|O51578|EX5B_BORBU Exodeoxyribonuclease V beta chain OS=Borrel... 30 5.2
>sp|O43114|ORC5_SCHPO Origin recognition complex subunit 5
OS=Schizosaccharomyces pombe GN=orc5 PE=1 SV=2
Length = 455
Score = 31.2 bits (69), Expect = 2.3
Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 8/57 (14%)
Frame = +1
Query: 247 LISTSGEINKEKNLWVDV*DS*LIVTKPQRI--------NLGKKVGINKSGFVKIIE 393
L+ T+ +++KE+N+W+++ D + RI ++ K GIN SGF+ ++E
Sbjct: 51 LLRTAFDLSKEENVWINLQDCFTVAHFWYRILIKVGVDKDIALKKGINISGFIYLLE 107
>sp|O51578|EX5B_BORBU Exodeoxyribonuclease V beta chain OS=Borrelia
burgdorferi GN=recB PE=3 SV=1
Length = 1169
Score = 30.0 bits (66), Expect = 5.2
Identities = 19/55 (34%), Positives = 30/55 (54%)
Frame = +1
Query: 217 IVLVPQEILGLISTSGEINKEKNLWVDV*DS*LIVTKPQRINLGKKVGINKSGFV 381
IVL+ + + LI+ +I EKNLW+ + + +TK Q+I K IN G +
Sbjct: 624 IVLLEKNEITLINAINKITFEKNLWIKIAN----ITKDQKIIEWAKNKINYKGLL 674
|
|
|
Link to BlastX Result : TrEMBL |
|
|
tr|A6D2J9|A6D2J9_9VIBR Putative uncharacterized protein OS=Vibrio shilonii AK1 |
|
|
50 |
|
|
35.0 |
|
|
1.8 |
|
|
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK943498|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_A09, 5'
(466 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|A6D2J9|A6D2J9_9VIBR Putative uncharacterized protein OS=Vibri... 35 1.8
tr|Q54CB7|Q54CB7_DICDI Putative uncharacterized protein OS=Dicty... 33 9.4
>tr|A6D2J9|A6D2J9_9VIBR Putative uncharacterized protein OS=Vibrio
shilonii AK1 GN=VSAK1_01567 PE=4 SV=1
Length = 319
Score = 35.0 bits (79), Expect = 1.8
Identities = 16/50 (32%), Positives = 31/50 (62%)
Frame = -3
Query: 188 LK*MSDEID*STSNFGEIIRKHIFSAKIKFFLSVNLAEIRSLNYQNHCET 39
LK +++E+D ST + ++++F A +F+L VNL + R++ Q C +
Sbjct: 234 LKQIANELDISTKSINLFFKEYLFIAPKRFYLLVNLFKFRNILIQGKCSS 283
>tr|Q54CB7|Q54CB7_DICDI Putative uncharacterized protein
OS=Dictyostelium discoideum GN=DDB_0191758 PE=4 SV=1
Length = 955
Score = 32.7 bits (73), Expect = 9.4
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +1
Query: 238 ILGLISTSGEINKEKNLWVDV*DS*LIVTKPQRINLGKKVGINKSGFVKIIEHLF 402
I+G ++ SGE+N E ++ DS +T IN+GK IN S + I F
Sbjct: 745 IIGTLNVSGELNSENGQFIFTLDS---LTNSTFINIGKNATINNSTLIIRINQYF 796
|
|
|
YMU02A01NGRL0003_A11
|
608
|
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0003_A11. 5' end sequence.
|
DK943499
|
-
|
|
|
DK943499
|
|
|
YMU02A01NGRL0003_A11 |
|
|
YMU02 |
|
|
608 |
|
|
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0003_A11. 5' end sequence. |
|
|
DK943499 |
|
|
young leaves |
|
|
- |
|
|
GAAGCAGTGGTATCAACGCAGAGTGGCCATTACGGCCGGGGGTACTCCAGTTAAAAGGCT
CGCTGGAAGGAGCTGGTGAACATCTATGGGGCCTTGTGCTGCTGCTACGTGCTTAAGAGC
GCAGTCTCCTCTACTCCCCTCGAAGGCATCGCGCCGTTCATCATCTCCCCCTTCGTTACC
CACCTTGTCTTGCAGAGTTTCTTCCTCTTACAACAGTGAGCCCATTTGCAGCCACCTTAA
AACCGGCCCTTCCTCGCTGATTCAGACAAAACTACGATCAACTGCTTGCTGGGCATCCCT
TGCCGCTTTTGTTTTAGCAGGCACAAAAGAGGCTTTGGCTCTTGAAGATGGGGCTATGGC
ATCATCAGGATTATCTTTAGCCAATCCAGAAGTCATGTATGCAATTCTTGCCATTGAAGC
TATTGCCCTTATTGGAGCAGCTGTGGGAGGTGCATCATGCCAACGGCAAGGCAAATATCG
TGAGGCCATTGATTATCACAATATGGTTATAGAAATTTCCAAAAGAACAGGTGTGACGTC
AGGAAATGCAGAAGCATTTGGATCAATTGCAGATTGCTATTGTGAACTTGGTGATCTCGA
GGCGGCCC |
|
|
- |
|
|
Link to BlastX Result : Swiss-Prot |
|
|
sp|A9JR78|IKBL2_DANRE NF-kappa-B inhibitor-like protein 2 OS=Danio rerio |
|
|
48 |
|
|
37.4 |
|
|
0.053 |
|
|
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK943499|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_A11, 5'
(568 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|A9JR78|IKBL2_DANRE NF-kappa-B inhibitor-like protein 2 OS=Dan... 37 0.053
sp|Q96AY4|TTC28_HUMAN Tetratricopeptide repeat protein 28 OS=Hom... 34 0.45
sp|Q80XJ3|TTC28_MOUSE Tetratricopeptide repeat protein 28 OS=Mus... 34 0.58
sp|Q3SP44|F16PA_NITWN Fructose-1,6-bisphosphatase class 1 OS=Nit... 32 1.7
sp|Q5SW96|ARH_HUMAN Low density lipoprotein receptor adapter pro... 32 2.2
sp|A2A3L6|TTC24_HUMAN Tetratricopeptide repeat protein 24 OS=Hom... 32 2.2
sp|P37285|KLC1_RAT Kinesin light chain 1 OS=Rattus norvegicus GN... 32 2.9
sp|Q5R581|KLC1_PONAB Kinesin light chain 1 OS=Pongo abelii GN=KL... 32 2.9
sp|Q07866|KLC1_HUMAN Kinesin light chain 1 OS=Homo sapiens GN=KL... 32 2.9
sp|Q05090|KLC_STRPU Kinesin light chain OS=Strongylocentrotus pu... 31 4.9
>sp|A9JR78|IKBL2_DANRE NF-kappa-B inhibitor-like protein 2 OS=Danio
rerio GN=nfkbil2 PE=2 SV=1
Length = 1427
Score = 37.4 bits (85), Expect = 0.053
Identities = 18/48 (37%), Positives = 28/48 (58%)
Frame = +1
Query: 424 RQGKYREAIDYHNMVIEISKRTGVTSGNAEAFGSIADCYCELGDLEAA 567
+ G Y+ AI+ H + +S+ G+A A I +CY ELG++EAA
Sbjct: 39 KTGDYQAAIEEHRQELALSEILHDVIGSAVANRKIGECYAELGNIEAA 86
>sp|Q96AY4|TTC28_HUMAN Tetratricopeptide repeat protein 28 OS=Homo
sapiens GN=TTC28 PE=1 SV=4
Length = 2481
Score = 34.3 bits (77), Expect = 0.45
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +1
Query: 421 QRQGKYREAIDYHNMVIEISKRTGVTSGNAEAFGSIADCYCELGDLEAA 567
Q+ G+Y A+ YH + ++I++ T + A+G++ Y LG E A
Sbjct: 1008 QQMGEYDTALQYHQLDLQIAEETNNPTCQGRAYGNLGLTYESLGTFERA 1056
>sp|Q80XJ3|TTC28_MOUSE Tetratricopeptide repeat protein 28 OS=Mus
musculus GN=Ttc28 PE=2 SV=2
Length = 1691
Score = 33.9 bits (76), Expect = 0.58
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +1
Query: 421 QRQGKYREAIDYHNMVIEISKRTGVTSGNAEAFGSIADCYCELGDLEAA 567
Q+ G+Y A+ YH + ++I++ T + A+G++ Y LG E A
Sbjct: 243 QQMGEYDTALQYHQLDLQIAEETDNPTCQGRAYGNLGLTYESLGTFERA 291
>sp|Q3SP44|F16PA_NITWN Fructose-1,6-bisphosphatase class 1
OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391)
GN=fbp PE=3 SV=1
Length = 345
Score = 32.3 bits (72), Expect = 1.7
Identities = 19/55 (34%), Positives = 27/55 (49%)
Frame = -3
Query: 167 EEETLQDKVGNEGGDDERRDAFEGSRGDCALKHVAAAQGPIDVHQLLPASLLTGV 3
+E TLQ+++ EGG D R A +G+ A AQ ID+ L L G+
Sbjct: 3 QEMTLQERMDGEGGSDPLRQAVKGA-------VAALAQAAIDISDLTCRGALAGI 50
>sp|Q5SW96|ARH_HUMAN Low density lipoprotein receptor adapter
protein 1 OS=Homo sapiens GN=LDLRAP1 PE=1 SV=3
Length = 308
Score = 32.0 bits (71), Expect = 2.2
Identities = 36/129 (27%), Positives = 55/129 (42%), Gaps = 6/129 (4%)
Frame = -3
Query: 377 SMARIAYMTSGLAKDNPDDAIAPSSRAKA----SFVPAKTKAARDAQQAVDRSFV*ISEE 210
S+ RI+Y T+ D IA S ++ +F+ K K A+ V ++F E
Sbjct: 112 SIYRISYCTADKMHDKVFAYIAQSQHNQSLECHAFLCTKRKMAQAVTLTVAQAFKVAFEF 171
Query: 209 GPVLRWLQMGSLL*EEETLQDKVGNEGGDDERRDAFEGSRGDC--ALKHVAAAQGPIDVH 36
V + EE+ +DK EGGD G+R DC +LK + A +D+
Sbjct: 172 WQVSK---------EEKEKRDKASQEGGD------VLGARQDCTPSLKSLVATGNLLDLE 216
Query: 35 QLLPASLLT 9
+ A L T
Sbjct: 217 ETAKAPLST 225
>sp|A2A3L6|TTC24_HUMAN Tetratricopeptide repeat protein 24 OS=Homo
sapiens GN=TTC24 PE=2 SV=1
Length = 582
Score = 32.0 bits (71), Expect = 2.2
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = +1
Query: 430 GKYREAIDYHNMVIEISKRTGVTSGNAEAFGSIADCYCELGDLEAA 567
G Y+EA ++H ++ G +FGS+A +LGD +AA
Sbjct: 287 GNYQEAREFHQKAADLHGSVGQRWEQGRSFGSLAFALSQLGDHKAA 332
>sp|P37285|KLC1_RAT Kinesin light chain 1 OS=Rattus norvegicus
GN=Klc1 PE=2 SV=2
Length = 560
Score = 31.6 bits (70), Expect = 2.9
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +1
Query: 418 CQRQGKYREAIDYHNMVIEI-SKRTGVTSGN-AEAFGSIADCYCELGDLEAA 567
CQ QGKY E Y+ +EI + G N A+ ++A CY + G + A
Sbjct: 349 CQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQA 400
>sp|Q5R581|KLC1_PONAB Kinesin light chain 1 OS=Pongo abelii GN=KLC1
PE=2 SV=3
Length = 560
Score = 31.6 bits (70), Expect = 2.9
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +1
Query: 418 CQRQGKYREAIDYHNMVIEI-SKRTGVTSGN-AEAFGSIADCYCELGDLEAA 567
CQ QGKY E Y+ +EI + G N A+ ++A CY + G + A
Sbjct: 349 CQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQA 400
>sp|Q07866|KLC1_HUMAN Kinesin light chain 1 OS=Homo sapiens GN=KLC1
PE=1 SV=2
Length = 573
Score = 31.6 bits (70), Expect = 2.9
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +1
Query: 418 CQRQGKYREAIDYHNMVIEI-SKRTGVTSGN-AEAFGSIADCYCELGDLEAA 567
CQ QGKY E Y+ +EI + G N A+ ++A CY + G + A
Sbjct: 349 CQNQGKYEEVEYYYQRALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQA 400
>sp|Q05090|KLC_STRPU Kinesin light chain OS=Strongylocentrotus
purpuratus PE=2 SV=1
Length = 686
Score = 30.8 bits (68), Expect = 4.9
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Frame = +1
Query: 418 CQRQGKYREAIDYHNMVIEI-SKRTGVTSGN-AEAFGSIADCYCELGDLEAA 567
CQ QGKY E Y+ +EI K+ G N A+ ++A Y + G +AA
Sbjct: 351 CQNQGKYEEVEWYYQRALEIYEKKLGPDDPNVAKTKNNLAAAYLKQGKYKAA 402
|
|
|
Link to BlastX Result : TrEMBL |
|
|
tr|A7P6F5|A7P6F5_VITVI Chromosome chr9 scaffold_7, whole genome shotgun sequence OS=Vitis vinifera |
|
|
51 |
|
|
79.3 |
|
|
1.0e-13 |
|
|
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK943499|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_A11, 5'
(568 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|A7P6F5|A7P6F5_VITVI Chromosome chr9 scaffold_7, whole genome ... 79 1e-13
tr|A5AXF8|A5AXF8_VITVI Putative uncharacterized protein OS=Vitis... 79 1e-13
tr|Q9LJH7|Q9LJH7_ARATH Emb|CAB41081.1 OS=Arabidopsis thaliana PE... 75 3e-12
tr|Q940U6|Q940U6_ARATH AT3g14110/MAG2_6 (Putative uncharacterize... 75 3e-12
tr|Q0GKF3|Q0GKF3_9ASPA Chloroplast FLU-like protein OS=Gymnadeni... 75 3e-12
tr|B4FXB9|B4FXB9_MAIZE FLU OS=Zea mays PE=2 SV=1 73 1e-11
tr|B4FH81|B4FH81_MAIZE Putative uncharacterized protein OS=Zea m... 73 1e-11
tr|Q8LRH2|Q8LRH2_ORYSJ cDNA clone:001-039-H05, full insert seque... 73 1e-11
tr|B8A8X1|B8A8X1_ORYSI Putative uncharacterized protein OS=Oryza... 73 1e-11
tr|A2ZTN9|A2ZTN9_ORYSJ Putative uncharacterized protein OS=Oryza... 73 1e-11
tr|A9NYZ2|A9NYZ2_PICSI Putative uncharacterized protein OS=Picea... 69 1e-10
tr|A9S0M3|A9S0M3_PHYPA Predicted protein OS=Physcomitrella paten... 68 3e-10
tr|B4FE53|B4FE53_MAIZE Putative uncharacterized protein OS=Zea m... 67 9e-10
tr|Q6YY12|Q6YY12_ORYSJ Os02g0586800 protein OS=Oryza sativa subs... 66 1e-09
tr|A2X6K9|A2X6K9_ORYSI Putative uncharacterized protein OS=Oryza... 66 1e-09
tr|Q64FN8|Q64FN8_CHLRE Chloroplast Flu-like protein long form (F... 54 8e-06
tr|Q64FN7|Q64FN7_CHLRE Chloroplast Flu-like protein short form (... 54 8e-06
tr|B0JHN4|B0JHN4_MICAN Tetratricopeptide repeat protein 28 like ... 44 0.008
tr|Q110T9|Q110T9_TRIEI Tetratricopeptide TPR_2 OS=Trichodesmium ... 42 0.024
tr|Q016B5|Q016B5_OSTTA Homology to unknown gene OS=Ostreococcus ... 41 0.053
tr|Q6NMH5|Q6NMH5_ARATH At3g16760 (Putative uncharacterized prote... 40 0.090
tr|B0C198|B0C198_ACAM1 TPR domain protein OS=Acaryochloris marin... 40 0.12
tr|B0JIJ6|B0JIJ6_MICAN Tetratricopeptide protein OS=Microcystis ... 39 0.26
tr|B4B0M0|B4B0M0_9CHRO TPR repeat-containing protein OS=Cyanothe... 39 0.26
tr|B4B0L8|B4B0L8_9CHRO TPR repeat-containing protein OS=Cyanothe... 39 0.26
tr|A8YB32|A8YB32_MICAE Similar to tr|Q8YUC9|Q8YUC9 OS=Microcysti... 38 0.34
tr|A9VDF3|A9VDF3_MONBE Predicted protein OS=Monosiga brevicollis... 38 0.45
tr|B2IYA1|B2IYA1_NOSP7 TPR repeat-containing protein OS=Nostoc p... 37 0.59
tr|B4VGZ6|B4VGZ6_9CYAN Tetratricopeptide repeat domain protein O... 37 0.59
tr|B4AZM0|B4AZM0_9CHRO TPR repeat-containing protein OS=Cyanothe... 37 0.59
>tr|A7P6F5|A7P6F5_VITVI Chromosome chr9 scaffold_7, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00034046001
PE=4 SV=1
Length = 341
Score = 79.3 bits (194), Expect = 1e-13
Identities = 37/51 (72%), Positives = 42/51 (82%)
Frame = +1
Query: 415 SCQRQGKYREAIDYHNMVIEISKRTGVTSGNAEAFGSIADCYCELGDLEAA 567
S QRQGKYR+AI YH+ V+EISKR G SGN EA+G+IADCY ELGDLE A
Sbjct: 277 SLQRQGKYRDAIKYHSTVLEISKREGENSGNTEAYGAIADCYTELGDLERA 327
>tr|A5AXF8|A5AXF8_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_027349 PE=4 SV=1
Length = 232
Score = 79.3 bits (194), Expect = 1e-13
Identities = 37/51 (72%), Positives = 42/51 (82%)
Frame = +1
Query: 415 SCQRQGKYREAIDYHNMVIEISKRTGVTSGNAEAFGSIADCYCELGDLEAA 567
S QRQGKYR+AI YH+ V+EISKR G SGN EA+G+IADCY ELGDLE A
Sbjct: 168 SLQRQGKYRDAIKYHSTVLEISKREGENSGNTEAYGAIADCYTELGDLERA 218
>tr|Q9LJH7|Q9LJH7_ARATH Emb|CAB41081.1 OS=Arabidopsis thaliana PE=4
SV=1
Length = 321
Score = 74.7 bits (182), Expect = 3e-12
Identities = 36/51 (70%), Positives = 40/51 (78%)
Frame = +1
Query: 415 SCQRQGKYREAIDYHNMVIEISKRTGVTSGNAEAFGSIADCYCELGDLEAA 567
S QRQGKYREAI YH+MV+ ISKR SG EA+G+IADCY ELGDLE A
Sbjct: 257 SLQRQGKYREAIQYHSMVLAISKRESEDSGITEAYGAIADCYTELGDLEKA 307
>tr|Q940U6|Q940U6_ARATH AT3g14110/MAG2_6 (Putative uncharacterized
protein) OS=Arabidopsis thaliana GN=At3g14110 PE=2 SV=1
Length = 316
Score = 74.7 bits (182), Expect = 3e-12
Identities = 36/51 (70%), Positives = 40/51 (78%)
Frame = +1
Query: 415 SCQRQGKYREAIDYHNMVIEISKRTGVTSGNAEAFGSIADCYCELGDLEAA 567
S QRQGKYREAI YH+MV+ ISKR SG EA+G+IADCY ELGDLE A
Sbjct: 252 SLQRQGKYREAIQYHSMVLAISKRESEDSGITEAYGAIADCYTELGDLEKA 302
>tr|Q0GKF3|Q0GKF3_9ASPA Chloroplast FLU-like protein OS=Gymnadenia
conopsea PE=2 SV=1
Length = 333
Score = 74.7 bits (182), Expect = 3e-12
Identities = 35/51 (68%), Positives = 40/51 (78%)
Frame = +1
Query: 415 SCQRQGKYREAIDYHNMVIEISKRTGVTSGNAEAFGSIADCYCELGDLEAA 567
S QRQGKY+EAI YH+ V+EI+ R G SG EA+GSIADCY ELGDLE A
Sbjct: 265 SLQRQGKYKEAIKYHSKVLEIASRAGEVSGATEAYGSIADCYTELGDLEKA 315
>tr|B4FXB9|B4FXB9_MAIZE FLU OS=Zea mays PE=2 SV=1
Length = 319
Score = 73.2 bits (178), Expect = 1e-11
Identities = 34/51 (66%), Positives = 42/51 (82%)
Frame = +1
Query: 415 SCQRQGKYREAIDYHNMVIEISKRTGVTSGNAEAFGSIADCYCELGDLEAA 567
S QRQGKY+EAI+YH+MV+ ISK TG +G EA+G+IADCY ELG+LE A
Sbjct: 255 SLQRQGKYKEAINYHSMVLNISKVTGEDAGVTEAYGAIADCYTELGELEKA 305
>tr|B4FH81|B4FH81_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 229
Score = 73.2 bits (178), Expect = 1e-11
Identities = 34/51 (66%), Positives = 42/51 (82%)
Frame = +1
Query: 415 SCQRQGKYREAIDYHNMVIEISKRTGVTSGNAEAFGSIADCYCELGDLEAA 567
S QRQGKY+EAI+YH+MV+ ISK TG +G EA+G+IADCY ELG+LE A
Sbjct: 165 SLQRQGKYKEAINYHSMVLNISKVTGEDAGVTEAYGAIADCYTELGELEKA 215
>tr|Q8LRH2|Q8LRH2_ORYSJ cDNA clone:001-039-H05, full insert sequence
OS=Oryza sativa subsp. japonica GN=P0520B06.17 PE=2 SV=1
Length = 324
Score = 72.8 bits (177), Expect = 1e-11
Identities = 34/51 (66%), Positives = 41/51 (80%)
Frame = +1
Query: 415 SCQRQGKYREAIDYHNMVIEISKRTGVTSGNAEAFGSIADCYCELGDLEAA 567
S QRQGKY+EAI YH+MV+ ISK TG +G EA+G+IADCY ELG+LE A
Sbjct: 260 SLQRQGKYKEAIKYHSMVLNISKLTGEDAGVTEAYGAIADCYTELGELEKA 310
>tr|B8A8X1|B8A8X1_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_02148 PE=4 SV=1
Length = 324
Score = 72.8 bits (177), Expect = 1e-11
Identities = 34/51 (66%), Positives = 41/51 (80%)
Frame = +1
Query: 415 SCQRQGKYREAIDYHNMVIEISKRTGVTSGNAEAFGSIADCYCELGDLEAA 567
S QRQGKY+EAI YH+MV+ ISK TG +G EA+G+IADCY ELG+LE A
Sbjct: 260 SLQRQGKYKEAIKYHSMVLNISKLTGEDAGVTEAYGAIADCYTELGELEKA 310
>tr|A2ZTN9|A2ZTN9_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_001911 PE=4 SV=1
Length = 265
Score = 72.8 bits (177), Expect = 1e-11
Identities = 34/51 (66%), Positives = 41/51 (80%)
Frame = +1
Query: 415 SCQRQGKYREAIDYHNMVIEISKRTGVTSGNAEAFGSIADCYCELGDLEAA 567
S QRQGKY+EAI YH+MV+ ISK TG +G EA+G+IADCY ELG+LE A
Sbjct: 201 SLQRQGKYKEAIKYHSMVLNISKLTGEDAGVTEAYGAIADCYTELGELEKA 251
|
|
|
YMU02A01NGRL0003_A12
|
582
|
Adiantum capillus-veneris mRNA for unknowm protein.
|
DK943500
|
CL1675Contig1
|
|
|
DK943500
|
|
|
YMU02A01NGRL0003_A12 |
|
|
YMU02 |
|
|
582 |
|
|
Adiantum capillus-veneris mRNA for unknowm protein. |
|
|
DK943500 |
|
|
young leaves |
|
|
CL1675Contig1 |
|
|
CTCCGCACAAACACAGGAGTAGAAAATGGCGCCCGCTGCTGCCGCGGCAGCGAGCAGTGG
CAGTGCCGCCTTCTCCTGTCCCACTCTCTCCCGAGTACCTGCCCACTCCTCGACACTCTT
CTCCTTCTTCTCCAGATCACGTGCCCCCCGCTACTTCCTTCAGCCTCAGCCTCAGCTGGC
GTTGATGATGGGTGGCCTACACATTGTCCGCGCTGAGAGTAGTGTGGATGAGGCCACCCC
CCCGGCAGATGATCCGCCGCCGCCGCCTCCCAAGCAGAGCGTGCTTGAAGCTCTCGATTT
CTCTGCCGTCCGTTCTCAAGACGACGCCCAGCTCCTGGACGATGCTCGCTATGCTACCAA
CATGGGCGAGAAGATGAGCCGCGAGCAGTATGCGGCCTTGAGAAGGAAGATAGGTGGCAC
GTACAGAGACTTCTTCAAGGACTCTATCGAAGTGGAAGGGGAGTTCGTGGATGAAGGGTG
GGTGGATAAGAGCTGCAGATTCTGCAAGAAAGACACAGCGTCTGAAGCCCGCACCGTTGA
TAAGTTTGGTCGGTACGCACACATTTCCTGCTTGGACAACTC |
|
|
- |
|
|
Link to BlastX Result : Swiss-Prot |
|
|
sp|A7GWZ2|ENGA_CAMC5 GTP-binding protein engA OS=Campylobacter curvus (strain 525.92) |
|
|
58 |
|
|
32.3 |
|
|
1.8 |
|
|
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK943500|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_A12, 5'
(582 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|A7GWZ2|ENGA_CAMC5 GTP-binding protein engA OS=Campylobacter c... 32 1.8
sp|Q5KIA9|SET1_CRYNE Histone-lysine N-methyltransferase, H3 lysi... 31 3.9
sp|Q01656|RSP4_CHLRE Flagellar radial spoke protein 4 OS=Chlamyd... 30 6.7
sp|Q9RY51|SSB_DEIRA Single-stranded DNA-binding protein OS=Deino... 30 8.7
sp|Q01373|FOX2_NEUCR Peroxisomal hydratase-dehydrogenase-epimera... 30 8.7
sp|P09053|AVTA_ECOLI Valine--pyruvate aminotransferase OS=Escher... 24 9.2
>sp|A7GWZ2|ENGA_CAMC5 GTP-binding protein engA OS=Campylobacter
curvus (strain 525.92) GN=engA PE=3 SV=1
Length = 461
Score = 32.3 bits (72), Expect = 1.8
Identities = 22/58 (37%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Frame = +2
Query: 386 QYAALRRKIGGTYRDFFKDSIEVEGE---FVDEGWVDKSCRFCKK---DTASEARTVD 541
Q A+ +I GT RD K IEVEG+ +D G +D+S K T +EA+ D
Sbjct: 24 QRIAITSEISGTTRDTNKAKIEVEGKDCLLIDSGGLDESSELFKNVKFKTLAEAKNSD 81
>sp|Q5KIA9|SET1_CRYNE Histone-lysine N-methyltransferase, H3
lysine-4 specific OS=Cryptococcus neoformans GN=SET1
PE=3 SV=1
Length = 1469
Score = 31.2 bits (69), Expect = 3.9
Identities = 17/67 (25%), Positives = 30/67 (44%)
Frame = -2
Query: 353 HSEHRPGAGRRLENGRQRNRELQARSAWEAAAADHLPGGWPHPHYSQRGQCVGHPSSTPA 174
HS PG G+ +NG+ R+R L + E ++ + + QR + PS +P
Sbjct: 177 HSHREPGRGKEHQNGQGRDRSLYRDHSRERESSRDERDRYSEEYKHQRSKARFSPSPSPE 236
Query: 173 EAEAEGS 153
+ + S
Sbjct: 237 RSRLKSS 243
>sp|Q01656|RSP4_CHLRE Flagellar radial spoke protein 4
OS=Chlamydomonas reinhardtii GN=RSP4 PE=3 SV=1
Length = 465
Score = 30.4 bits (67), Expect = 6.7
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Frame = -2
Query: 293 ELQARSAWEAAAADHL--PGGWPH--PHYSQRGQCVGHPSSTPAEAEAE 159
EL+ WE A + P W H PH +G+C H P +A+ +
Sbjct: 298 ELERAEDWEPPAGREMAAPTAWVHVRPHLKSQGRCEVHKRELPEDADED 346
>sp|Q9RY51|SSB_DEIRA Single-stranded DNA-binding protein
OS=Deinococcus radiodurans GN=ssb PE=1 SV=2
Length = 301
Score = 30.0 bits (66), Expect = 8.7
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
Frame = +2
Query: 350 YATNMGEKMSREQY--AALRRKIGGTYRDFFK-DSIEVEGEFVDEGWVDKSCRFCKKDTA 520
Y G++ + Y A L R + ++ K D + + G V+EGW DK + T
Sbjct: 164 YQDRQGQRQEKVHYIDATLWRDLAENMKELRKGDPVMIMGRLVNEGWTDKDGN-KRNSTR 222
Query: 521 SEARTVDKFGRYA 559
EA V+ R A
Sbjct: 223 VEATRVEALARGA 235
>sp|Q01373|FOX2_NEUCR Peroxisomal hydratase-dehydrogenase-epimerase
OS=Neurospora crassa GN=fox-2 PE=1 SV=1
Length = 894
Score = 30.0 bits (66), Expect = 8.7
Identities = 23/76 (30%), Positives = 33/76 (43%), Gaps = 14/76 (18%)
Frame = -3
Query: 481 PPFIHELPFHFDRVLEEVS------------VRATYLPSQGRILLAAHLLAHV--GSIAS 344
PPF E+PF FD ++ S VR +P+ GR++ LL V GS A
Sbjct: 669 PPFNTEMPFSFDDIVPNFSPMMLLHGEQYLEVRKYPIPTSGRLVSKGKLLEVVDKGSAAI 728
Query: 343 IVQELGVVLRTDGREI 296
+ Q + G E+
Sbjct: 729 VKQGITTFNAETGEEL 744
>sp|P09053|AVTA_ECOLI Valine--pyruvate aminotransferase
OS=Escherichia coli (strain K12) GN=avtA PE=3 SV=3
Length = 417
Score = 23.9 bits (50), Expect(2) = 9.2
Identities = 14/48 (29%), Positives = 18/48 (37%), Gaps = 3/48 (6%)
Frame = -2
Query: 308 RQRNRELQARSAWEAAAADHLPG---GWPHPHYSQRGQCVGHPSSTPA 174
+Q + L+AR + PG WPH H R V P A
Sbjct: 353 KQLYQRLKARGVLMVPGHNFFPGLDKPWPHTHQCMRMNYVPEPEKIEA 400
Score = 23.5 bits (49), Expect(2) = 9.2
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = -3
Query: 460 PFHFDRVLEEVSVRATYLP 404
PF++ RV E +++ YLP
Sbjct: 308 PFYYQRVQETIAIIRRYLP 326
|
|
|
Link to BlastX Result : TrEMBL |
|
|
tr|B8LP25|B8LP25_PICSI Putative uncharacterized protein OS=Picea sitchensis |
|
|
99 |
|
|
153.0 |
|
|
6.0e-36 |
|
|
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK943500|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_A12, 5'
(582 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|B8LP25|B8LP25_PICSI Putative uncharacterized protein OS=Picea... 153 6e-36
tr|A9RPH7|A9RPH7_PHYPA Predicted protein (Fragment) OS=Physcomit... 149 1e-34
tr|Q9LYL4|Q9LYL4_ARATH Putative uncharacterized protein F18O21_2... 149 1e-34
tr|A7Q3U2|A7Q3U2_VITVI Chromosome chr13 scaffold_48, whole genom... 147 3e-34
tr|A5ACL9|A5ACL9_VITVI Putative uncharacterized protein OS=Vitis... 147 3e-34
tr|Q8LRD0|Q8LRD0_ORYSJ Putative uncharacterized protein P0031D02... 147 4e-34
tr|B6SY86|B6SY86_MAIZE Putative uncharacterized protein OS=Zea m... 147 4e-34
tr|B6SQ41|B6SQ41_MAIZE Putative uncharacterized protein OS=Zea m... 147 4e-34
tr|A2WWH6|A2WWH6_ORYSI Putative uncharacterized protein OS=Oryza... 147 4e-34
tr|Q00SR8|Q00SR8_OSTTA Homology to unknown gene OS=Ostreococcus ... 64 5e-09
tr|A4S9S3|A4S9S3_OSTLU Predicted protein OS=Ostreococcus lucimar... 60 9e-08
tr|B8AUK3|B8AUK3_ORYSI Putative uncharacterized protein OS=Oryza... 37 1.0
tr|Q5M6A3|Q5M6A3_STRT2 Polar amino acid ABC uptake transporter A... 34 5.2
tr|Q5M1R2|Q5M1R2_STRT1 Amino acid (Glutamine) ABC transporter AT... 34 5.2
tr|Q03MN8|Q03MN8_STRTD ABC-type polar amino acid transport syste... 34 5.2
tr|Q30BN3|Q30BN3_ADEG8 ORF12 OS=Avian adenovirus 8 (strain ATCC ... 33 8.8
tr|A2SCL0|A2SCL0_METPP Formate dehydrogenase, alpha subunit OS=M... 33 8.8
tr|Q4N4D9|Q4N4D9_THEPA Sec23, putative OS=Theileria parva GN=TP0... 33 8.8
>tr|B8LP25|B8LP25_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 202
Score = 153 bits (387), Expect = 6e-36
Identities = 69/99 (69%), Positives = 86/99 (86%)
Frame = +2
Query: 278 SVLEALDFSAVRSQDDAQLLDDARYATNMGEKMSREQYAALRRKIGGTYRDFFKDSIEVE 457
S+ EALDFS VRS++DA LL+DAR AT G++MSREQYAALRRKIGGTY+DFFK +EVE
Sbjct: 89 SITEALDFSEVRSEEDAVLLEDARDATKSGDRMSREQYAALRRKIGGTYQDFFKGYVEVE 148
Query: 458 GEFVDEGWVDKSCRFCKKDTASEARTVDKFGRYAHISCL 574
GE+V+EGWVDK+C+ CKKDT++E R VD GRYAH++C+
Sbjct: 149 GEYVEEGWVDKTCKICKKDTSNEPRNVDAMGRYAHVACM 187
>tr|A9RPH7|A9RPH7_PHYPA Predicted protein (Fragment)
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_48718 PE=4 SV=1
Length = 128
Score = 149 bits (376), Expect = 1e-34
Identities = 68/101 (67%), Positives = 82/101 (81%)
Frame = +2
Query: 278 SVLEALDFSAVRSQDDAQLLDDARYATNMGEKMSREQYAALRRKIGGTYRDFFKDSIEVE 457
S+ +ALDF+AVRS+ DA+LL DAR AT GEKMSREQY ALRRKIGGTY DFFK +EV+
Sbjct: 15 SLTDALDFAAVRSEKDAELLQDARQATKSGEKMSREQYGALRRKIGGTYGDFFKGYVEVD 74
Query: 458 GEFVDEGWVDKSCRFCKKDTASEARTVDKFGRYAHISCLDN 580
G +VDEGWVDK+C++CKKDT RT D GRYAH++C +N
Sbjct: 75 GAYVDEGWVDKTCKYCKKDTKGAPRTKDSSGRYAHVACAEN 115
>tr|Q9LYL4|Q9LYL4_ARATH Putative uncharacterized protein F18O21_250
(Putative uncharacterized protein At3g56290) (Putative
uncharacterized protein At3g56290; F18O21_250)
OS=Arabidopsis thaliana GN=F18O21_250 PE=2 SV=1
Length = 173
Score = 149 bits (375), Expect = 1e-34
Identities = 67/98 (68%), Positives = 82/98 (83%)
Frame = +2
Query: 287 EALDFSAVRSQDDAQLLDDARYATNMGEKMSREQYAALRRKIGGTYRDFFKDSIEVEGEF 466
+ALDFS VRS+ DA+LL +AR AT G KM++EQY ALRRKIGGTY+DFFK +EV+G++
Sbjct: 63 DALDFSQVRSEKDAELLYEAREATKSGRKMTQEQYGALRRKIGGTYKDFFKSYVEVDGQY 122
Query: 467 VDEGWVDKSCRFCKKDTASEARTVDKFGRYAHISCLDN 580
V+EGWVDK+C+ CKKDT EAR VDK GRYAH+SCL N
Sbjct: 123 VEEGWVDKTCKICKKDTKGEARQVDKLGRYAHVSCLQN 160
>tr|A7Q3U2|A7Q3U2_VITVI Chromosome chr13 scaffold_48, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00029417001
PE=4 SV=1
Length = 176
Score = 147 bits (372), Expect = 3e-34
Identities = 67/100 (67%), Positives = 83/100 (83%)
Frame = +2
Query: 278 SVLEALDFSAVRSQDDAQLLDDARYATNMGEKMSREQYAALRRKIGGTYRDFFKDSIEVE 457
SV EALDFS VRS +DAQLL+ AR AT G +MSREQY ALRRKIGGTY+DFFK ++V+
Sbjct: 63 SVTEALDFSQVRSVEDAQLLEKARDATQSGGRMSREQYGALRRKIGGTYKDFFKSYVDVD 122
Query: 458 GEFVDEGWVDKSCRFCKKDTASEARTVDKFGRYAHISCLD 577
G++V+EGWVDK+C+ CK+DT E R VDKFGRY H++CL+
Sbjct: 123 GQYVEEGWVDKTCKVCKEDTRGEPRQVDKFGRYVHVACLE 162
>tr|A5ACL9|A5ACL9_VITVI Putative uncharacterized protein OS=Vitis
vinifera GN=VITISV_043600 PE=4 SV=1
Length = 176
Score = 147 bits (372), Expect = 3e-34
Identities = 67/100 (67%), Positives = 83/100 (83%)
Frame = +2
Query: 278 SVLEALDFSAVRSQDDAQLLDDARYATNMGEKMSREQYAALRRKIGGTYRDFFKDSIEVE 457
SV EALDFS VRS +DAQLL+ AR AT G +MSREQY ALRRKIGGTY+DFFK ++V+
Sbjct: 63 SVTEALDFSQVRSVEDAQLLEKARDATQSGGRMSREQYGALRRKIGGTYKDFFKSYVDVD 122
Query: 458 GEFVDEGWVDKSCRFCKKDTASEARTVDKFGRYAHISCLD 577
G++V+EGWVDK+C+ CK+DT E R VDKFGRY H++CL+
Sbjct: 123 GQYVEEGWVDKTCKVCKEDTRGEPRQVDKFGRYVHVACLE 162
>tr|Q8LRD0|Q8LRD0_ORYSJ Putative uncharacterized protein P0031D02.18
(Putative uncharacterized protein) (Os01g0823600
protein) OS=Oryza sativa subsp. japonica GN=P0031D02.18
PE=4 SV=1
Length = 170
Score = 147 bits (371), Expect = 4e-34
Identities = 66/101 (65%), Positives = 84/101 (83%)
Frame = +2
Query: 278 SVLEALDFSAVRSQDDAQLLDDARYATNMGEKMSREQYAALRRKIGGTYRDFFKDSIEVE 457
S+ EALDFS VRS+ DA+LL +AR AT G +M++EQY ALRRKIGGTY+DFFK ++V+
Sbjct: 57 SITEALDFSQVRSEKDAELLYEAREATKDGGRMTKEQYGALRRKIGGTYKDFFKSYVDVD 116
Query: 458 GEFVDEGWVDKSCRFCKKDTASEARTVDKFGRYAHISCLDN 580
GE+V+EGWVDK+C+ CKKDT E R VDK GRYAH++CL+N
Sbjct: 117 GEYVEEGWVDKTCKVCKKDTRGEPRQVDKLGRYAHVACLEN 157
>tr|B6SY86|B6SY86_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 162
Score = 147 bits (371), Expect = 4e-34
Identities = 66/101 (65%), Positives = 84/101 (83%)
Frame = +2
Query: 278 SVLEALDFSAVRSQDDAQLLDDARYATNMGEKMSREQYAALRRKIGGTYRDFFKDSIEVE 457
S+ EALDFS VRS+ DA+LL +AR +T G +M+REQY ALRRKIGGTY+DFFK +EV+
Sbjct: 49 SITEALDFSQVRSEKDAELLYEARESTRGGGRMTREQYGALRRKIGGTYQDFFKSYVEVD 108
Query: 458 GEFVDEGWVDKSCRFCKKDTASEARTVDKFGRYAHISCLDN 580
G++V+EGWVDK+C+ CKKDT E R VDK GRYAH++CL+N
Sbjct: 109 GQYVEEGWVDKTCKICKKDTRGEPRQVDKLGRYAHVACLEN 149
>tr|B6SQ41|B6SQ41_MAIZE Putative uncharacterized protein OS=Zea mays
PE=2 SV=1
Length = 162
Score = 147 bits (371), Expect = 4e-34
Identities = 66/101 (65%), Positives = 84/101 (83%)
Frame = +2
Query: 278 SVLEALDFSAVRSQDDAQLLDDARYATNMGEKMSREQYAALRRKIGGTYRDFFKDSIEVE 457
S+ EALDFS VRS+ DA+LL +AR +T G +M+REQY ALRRKIGGTY+DFFK +EV+
Sbjct: 49 SITEALDFSQVRSEKDAELLYEARESTKGGGRMTREQYGALRRKIGGTYQDFFKSYVEVD 108
Query: 458 GEFVDEGWVDKSCRFCKKDTASEARTVDKFGRYAHISCLDN 580
G++V+EGWVDK+C+ CKKDT E R VDK GRYAH++CL+N
Sbjct: 109 GQYVEEGWVDKTCKICKKDTRGEPRQVDKLGRYAHVACLEN 149
>tr|A2WWH6|A2WWH6_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_04255 PE=4 SV=1
Length = 170
Score = 147 bits (371), Expect = 4e-34
Identities = 66/101 (65%), Positives = 84/101 (83%)
Frame = +2
Query: 278 SVLEALDFSAVRSQDDAQLLDDARYATNMGEKMSREQYAALRRKIGGTYRDFFKDSIEVE 457
S+ EALDFS VRS+ DA+LL +AR AT G +M++EQY ALRRKIGGTY+DFFK ++V+
Sbjct: 57 SITEALDFSQVRSEKDAELLYEAREATKDGGRMTKEQYGALRRKIGGTYKDFFKSYVDVD 116
Query: 458 GEFVDEGWVDKSCRFCKKDTASEARTVDKFGRYAHISCLDN 580
GE+V+EGWVDK+C+ CKKDT E R VDK GRYAH++CL+N
Sbjct: 117 GEYVEEGWVDKTCKVCKKDTRGEPRQVDKLGRYAHVACLEN 157
>tr|Q00SR8|Q00SR8_OSTTA Homology to unknown gene OS=Ostreococcus
tauri GN=Ot18g00990 PE=4 SV=1
Length = 161
Score = 64.3 bits (155), Expect = 5e-09
Identities = 36/71 (50%), Positives = 47/71 (66%)
Frame = +2
Query: 278 SVLEALDFSAVRSQDDAQLLDDARYATNMGEKMSREQYAALRRKIGGTYRDFFKDSIEVE 457
SV ALDF + D LL+ AR N G+KMS EQY ALRRK+GGT FF ++++V
Sbjct: 61 SVARALDFQE-DIESDRGLLNAARRMRN-GDKMSTEQYGALRRKVGGTKGGFFGENVDVV 118
Query: 458 GEFVDEGWVDK 490
G + D+G+VDK
Sbjct: 119 GAYTDKGYVDK 129
|
|
|
YMU02A01NGRL0003_A14
|
519
|
Adiantum capillus-veneris mRNA for unknowm protein.
|
DK943501
|
CL1600Contig1
|
|
|
DK943501
|
|
|
YMU02A01NGRL0003_A14 |
|
|
YMU02 |
|
|
519 |
|
|
Adiantum capillus-veneris mRNA for unknowm protein. |
|
|
DK943501 |
|
|
young leaves |
|
|
CL1600Contig1 |
|
|
GAAATGAAGCAAAGGACTTTAGCTGAAGAGAACCAAAAAATGCTGGAGGTTTTGAAGGAA
AGAGAGCAGTCCTTGCAAGACCAGTTGCGAGCTGCTAAGGAGACTGTGCAAAACATGCAG
AGGCTTCATGAATATGGTCAAAGTCAGTTGTTTGAGTTTCGAGCACAATCTGACGAAGAG
CGAGCAGCAAAACAGGCAGAGCTGAATTTGCTGACAGATGAGGTTGAGAGGGCCCAAACG
AGATTACTGAGCCTTGAGAGGGAGAAGGAGCAGTTGAGATCACAGCTGCAAGTTGCACAC
ACTCCAGAGACTAATGTTCTCGAACGACAAGAAATCAGCACTAGTACACTGGAAGTATCT
TTGATAGAGAAGGAGAAAAAGATCTCAGAGCTGCATGTTGAACTGAACAATCTAGAAATG
CAGTTGTCAATACAGCAGGACCAGCACCTTACAGAATTGAAGAGATTGAACGCATCAGTC
AATGAGAAGGTATTAGCAATTGAAGAACTGCAAAAGAAC |
|
|
- |
|
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Link to BlastX Result : Swiss-Prot |
|
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sp|Q9LS42|CASP_ARATH Protein CASP OS=Arabidopsis thaliana |
|
|
172 |
|
|
190.0 |
|
|
3.0e-48 |
|
|
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK943501|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_A14, 5'
(519 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9LS42|CASP_ARATH Protein CASP OS=Arabidopsis thaliana GN=CAS... 190 3e-48
sp|P53564|CUX1_MOUSE Homeobox protein cut-like 1 OS=Mus musculus... 76 8e-14
sp|P70403|CASP_MOUSE Protein CASP OS=Mus musculus GN=Cux1 PE=2 SV=2 75 2e-13
sp|P39880|CUX1_HUMAN Homeobox protein cut-like 1 OS=Homo sapiens... 74 3e-13
sp|Q5R8V1|CASP_PONAB Protein CASP OS=Pongo abelii GN=CUTL1 PE=2 ... 74 3e-13
sp|Q13948|CASP_HUMAN Protein CASP OS=Homo sapiens GN=CUX1 PE=1 SV=2 74 3e-13
sp|O14529|CUX2_HUMAN Homeobox protein cut-like 2 OS=Homo sapiens... 61 4e-09
sp|P70298|CUX2_MOUSE Homeobox protein cut-like 2 OS=Mus musculus... 56 9e-08
sp|P10587|MYH11_CHICK Myosin-11 OS=Gallus gallus GN=MYH11 PE=1 SV=4 55 3e-07
sp|Q9PTD7|CING_XENLA Cingulin OS=Xenopus laevis GN=cgn PE=1 SV=2 54 6e-07
sp|Q7SYB5|DEFI6_DANRE Differentially expressed in FDCP 6 homolog... 52 1e-06
sp|Q9P2M7|CING_HUMAN Cingulin OS=Homo sapiens GN=CGN PE=1 SV=2 52 2e-06
sp|Q6AW69|CGNL1_MOUSE Cingulin-like protein 1 OS=Mus musculus GN... 52 2e-06
sp|Q6DFL0|C102A_XENLA Coiled-coil domain-containing protein 102A... 52 2e-06
sp|O76329|ACTNB_DICDI Interaptin OS=Dictyostelium discoideum GN=... 52 2e-06
sp|P39922|MYS3_HYDAT Myosin heavy chain, clone 203 (Fragment) OS... 51 3e-06
sp|Q54G05|LRRX1_DICDI Putative leucine-rich repeat-containing pr... 50 5e-06
sp|Q9TU23|CE290_BOVIN Centrosomal protein of 290 kDa (Fragment) ... 50 8e-06
sp|Q9NXG0|CNTLN_HUMAN Centlein OS=Homo sapiens GN=CNTLN PE=2 SV=4 49 1e-05
sp|Q6UVJ0|SAS6_HUMAN Spindle assembly abnormal protein 6 homolog... 49 1e-05
sp|Q258K2|MYH9_CANFA Myosin-9 OS=Canis familiaris GN=MYH9 PE=2 SV=1 49 1e-05
sp|Q6DIX6|CC64B_XENTR Coiled-coil domain-containing protein 64B ... 49 1e-05
sp|Q9UH65|SWP70_HUMAN Switch-associated protein 70 OS=Homo sapie... 49 2e-05
sp|Q92817|EVPL_HUMAN Envoplakin OS=Homo sapiens GN=EVPL PE=1 SV=2 49 2e-05
sp|Q0VF96|CGNL1_HUMAN Cingulin-like protein 1 OS=Homo sapiens GN... 49 2e-05
sp|Q8VD04|GRAP1_MOUSE GRIP1-associated protein 1 OS=Mus musculus... 48 2e-05
sp|O60437|PEPL_HUMAN Periplakin OS=Homo sapiens GN=PPL PE=1 SV=2 48 3e-05
sp|Q80ST9|LCA5_MOUSE Lebercilin OS=Mus musculus GN=Lca5 PE=2 SV=1 48 3e-05
sp|Q5SNZ0|GRDN_MOUSE Girdin OS=Mus musculus GN=Ccdc88a PE=1 SV=2 48 3e-05
sp|Q9JHZ4|GRAP1_RAT GRIP1-associated protein 1 OS=Rattus norvegi... 48 3e-05
>sp|Q9LS42|CASP_ARATH Protein CASP OS=Arabidopsis thaliana GN=CASP
PE=1 SV=2
Length = 689
Score = 190 bits (483), Expect = 3e-48
Identities = 101/172 (58%), Positives = 132/172 (76%)
Frame = +1
Query: 1 EMKQRTLAEENQKMLEVLKEREQSLQDQLRAAKETVQNMQRLHEYGQSQLFEFRAQSDEE 180
E+KQR LAEENQK +E+LK+REQ+LQDQLR AK++V MQ+LHE Q+QLFE RAQSDEE
Sbjct: 191 EIKQRNLAEENQKTMELLKDREQALQDQLRQAKDSVSTMQKLHELAQNQLFELRAQSDEE 250
Query: 181 RAAKQAELNLLTDEVERAQTRLLSLEREKEQLRSQLQVAHTPETNVLERQEISTSTLEVS 360
A KQ+E++LL DEVERAQTRLL+LEREK LRSQLQ A+ N S S LE S
Sbjct: 251 TAGKQSEVSLLMDEVERAQTRLLTLEREKGHLRSQLQTANEDTDNKKSDNIDSNSMLENS 310
Query: 361 LIEKEKKISELHVELNNLEMQLSIQQDQHLTELKRLNASVNEKVLAIEELQK 516
L KEK ISEL++E++N+E L+ +++ H+ E+K+LN+ +N+K IEE++K
Sbjct: 311 LTAKEKIISELNMEIHNVETALANERESHVAEIKKLNSLLNKKDTIIEEMKK 362
>sp|P53564|CUX1_MOUSE Homeobox protein cut-like 1 OS=Mus musculus
GN=Cux1 PE=1 SV=3
Length = 1515
Score = 76.3 bits (186), Expect = 8e-14
Identities = 48/182 (26%), Positives = 96/182 (52%), Gaps = 18/182 (9%)
Frame = +1
Query: 25 EENQKMLEVLKEREQSLQD-------QLRAAKETVQNMQRLHEYGQSQLFEFRAQSDEER 183
E+ QK+ E+E+ LQ+ +L A+ +Q +Q E +++LF+ + + DEE
Sbjct: 163 EKEQKLQNDFAEKERKLQETQMSTTSKLEEAEHKLQTLQTALEKTRTELFDLKTKYDEET 222
Query: 184 AAKQAELNLLTDEVERAQTRLLSLEREKEQLRSQL-----------QVAHTPETNVLERQ 330
AK E+ ++ ++ERA R +RE E LR QL Q+ P+ + +
Sbjct: 223 TAKADEIEMIMTDLERANQRAEVAQREAETLREQLSSANHSLQLASQIQKAPDVAI---E 279
Query: 331 EISTSTLEVSLIEKEKKISELHVELNNLEMQLSIQQDQHLTELKRLNASVNEKVLAIEEL 510
++ S+LEV L KE++I++L ++ L+ L+ ++ +++ +L +N K +++L
Sbjct: 280 VLTRSSLEVELAAKEREIAQLVEDVQRLQASLTKLRENSASQISQLEQQLNAKNSTLKQL 339
Query: 511 QK 516
++
Sbjct: 340 EE 341
Score = 38.9 bits (89), Expect = 0.015
Identities = 43/177 (24%), Positives = 70/177 (39%), Gaps = 34/177 (19%)
Frame = +1
Query: 1 EMKQRTLAEENQKMLEVLKEREQSLQDQLRAAKETVQNMQRLHEYGQSQLFEF-RAQSDE 177
EM L NQ+ EV + ++L++QL +A ++Q ++ + + R+ +
Sbjct: 230 EMIMTDLERANQRA-EVAQREAETLREQLSSANHSLQLASQIQKAPDVAIEVLTRSSLEV 288
Query: 178 ERAAKQAELNLLTDEVERAQTRLLSLEREK----EQLRSQLQVAHTP------------- 306
E AAK+ E+ L ++V+R Q L L QL QL ++
Sbjct: 289 ELAAKEREIAQLVEDVQRLQASLTKLRENSASQISQLEQQLNAKNSTLKQLEEKLKGQAD 348
Query: 307 ------ETNVLERQEI----------STSTLEVSLIEKEKKISELHVELNNLEMQLS 429
E N L+ E ST LEV L+EK + + + L LS
Sbjct: 349 YEEVKKELNTLKSMEFAPSEGAGTQDSTKPLEVLLLEKNRSLQSENATLRISNSDLS 405
>sp|P70403|CASP_MOUSE Protein CASP OS=Mus musculus GN=Cux1 PE=2 SV=2
Length = 678
Score = 74.7 bits (182), Expect = 2e-13
Identities = 50/181 (27%), Positives = 96/181 (53%), Gaps = 17/181 (9%)
Frame = +1
Query: 25 EENQKMLEVLKEREQSLQD-------QLRAAKETVQNMQRLHEYGQSQLFEFRAQSDEER 183
E+ QK+ E+E+ LQ+ +L A+ +Q +Q E +++LF+ + + DEE
Sbjct: 174 EKEQKLQNDFAEKERKLQETQMSTTSKLEEAEHKLQTLQTALEKTRTELFDLKTKYDEET 233
Query: 184 AAKQAELNLLTDEVERAQTRLLSLEREKEQLRSQLQVAH---------TPETNVLERQEI 336
AK E+ ++ ++ERA R +RE E LR QL A+ +V + E+
Sbjct: 234 TAKADEIEMIMTDLERANQRAEVAQREAETLREQLSSANHSLQLASQIQKAPDVEQAIEV 293
Query: 337 ST-STLEVSLIEKEKKISELHVELNNLEMQLSIQQDQHLTELKRLNASVNEKVLAIEELQ 513
T S+LEV L KE++I++L ++ L+ L+ ++ +++ +L +N K +++L+
Sbjct: 294 LTRSSLEVELAAKEREIAQLVEDVQRLQASLTKLRENSASQISQLEQQLNAKNSTLKQLE 353
Query: 514 K 516
+
Sbjct: 354 E 354
Score = 45.1 bits (105), Expect = 2e-04
Identities = 54/218 (24%), Positives = 88/218 (40%), Gaps = 46/218 (21%)
Frame = +1
Query: 1 EMKQRTLAEENQKMLEVLKEREQSLQDQLRAAKETVQ---NMQRLHEYGQSQLFEFRAQS 171
EM L NQ+ EV + ++L++QL +A ++Q +Q+ + Q+ R+
Sbjct: 241 EMIMTDLERANQRA-EVAQREAETLREQLSSANHSLQLASQIQKAPDVEQAIEVLTRSSL 299
Query: 172 DEERAAKQAELNLLTDEVERAQTRLLSLEREK----EQLRSQLQVAHTP----------- 306
+ E AAK+ E+ L ++V+R Q L L QL QL ++
Sbjct: 300 EVELAAKEREIAQLVEDVQRLQASLTKLRENSASQISQLEQQLNAKNSTLKQLEEKLKGQ 359
Query: 307 --------ETNVLERQEI----------STSTLEVSLIEKEKKISELHVELNNLEMQLS- 429
E N L+ E ST LEV L+EK + + + L LS
Sbjct: 360 ADYEEVKKELNTLKSMEFAPSEGAGTQDSTKPLEVLLLEKNRSLQSENATLRISNSDLSG 419
Query: 430 --IQQDQHLTEL-------KRLNASVNEKVLAIEELQK 516
+ HLTE K L A + + + I+ +Q+
Sbjct: 420 RCAELQIHLTEATAKAVEQKELIARLEQDLSTIQSIQR 457
>sp|P39880|CUX1_HUMAN Homeobox protein cut-like 1 OS=Homo sapiens
GN=CUX1 PE=1 SV=2
Length = 1505
Score = 74.3 bits (181), Expect = 3e-13
Identities = 50/181 (27%), Positives = 97/181 (53%), Gaps = 17/181 (9%)
Frame = +1
Query: 25 EENQKMLEVLKEREQSLQD-------QLRAAKETVQNMQRLHEYGQSQLFEFRAQSDEER 183
E+ QK+ E+E+ LQ+ +L A+ VQ++Q E +++LF+ + + DEE
Sbjct: 163 EKEQKLQNDFAEKERKLQETQMSTTSKLEEAEHKVQSLQTALEKTRTELFDLKTKYDEET 222
Query: 184 AAKQAELNLLTDEVERAQTRLLSLEREKEQLRSQLQVAH---------TPETNVLERQEI 336
AK E+ ++ ++ERA R +RE E LR QL A+ +V + E+
Sbjct: 223 TAKADEIEMIMTDLERANQRAEVAQREAETLREQLSSANHSLQLASQIQKAPDVEQAIEV 282
Query: 337 ST-STLEVSLIEKEKKISELHVELNNLEMQLSIQQDQHLTELKRLNASVNEKVLAIEELQ 513
T S+LEV L KE++I++L ++ L+ L+ ++ +++ +L ++ K +++L+
Sbjct: 283 LTRSSLEVELAAKEREIAQLVEDVQRLQASLTKLRENSASQISQLEQQLSAKNSTLKQLE 342
Query: 514 K 516
+
Sbjct: 343 E 343
>sp|Q5R8V1|CASP_PONAB Protein CASP OS=Pongo abelii GN=CUTL1 PE=2
SV=1
Length = 678
Score = 74.3 bits (181), Expect = 3e-13
Identities = 50/181 (27%), Positives = 97/181 (53%), Gaps = 17/181 (9%)
Frame = +1
Query: 25 EENQKMLEVLKEREQSLQD-------QLRAAKETVQNMQRLHEYGQSQLFEFRAQSDEER 183
E+ QK+ E+E+ LQ+ +L A+ VQ++Q E +++LF+ + + DEE
Sbjct: 174 EKEQKLQNDFAEKERKLQETQMSTTSKLEEAEHKVQSLQTALEKTRTELFDLKTKYDEET 233
Query: 184 AAKQAELNLLTDEVERAQTRLLSLEREKEQLRSQLQVAH---------TPETNVLERQEI 336
AK E+ ++ ++ERA R +RE E LR QL A+ +V + E+
Sbjct: 234 TAKADEIEMIMTDLERANQRAEVAQREAETLREQLSSANHSLQLASQIQKAPDVEQAIEV 293
Query: 337 ST-STLEVSLIEKEKKISELHVELNNLEMQLSIQQDQHLTELKRLNASVNEKVLAIEELQ 513
T S+LEV L KE++I++L ++ L+ L+ ++ +++ +L ++ K +++L+
Sbjct: 294 LTRSSLEVELAAKEREIAQLVEDVQRLQASLTKLRENSASQISQLEQQLSAKNSTLKQLE 353
Query: 514 K 516
+
Sbjct: 354 E 354
>sp|Q13948|CASP_HUMAN Protein CASP OS=Homo sapiens GN=CUX1 PE=1 SV=2
Length = 678
Score = 74.3 bits (181), Expect = 3e-13
Identities = 50/181 (27%), Positives = 97/181 (53%), Gaps = 17/181 (9%)
Frame = +1
Query: 25 EENQKMLEVLKEREQSLQD-------QLRAAKETVQNMQRLHEYGQSQLFEFRAQSDEER 183
E+ QK+ E+E+ LQ+ +L A+ VQ++Q E +++LF+ + + DEE
Sbjct: 174 EKEQKLQNDFAEKERKLQETQMSTTSKLEEAEHKVQSLQTALEKTRTELFDLKTKYDEET 233
Query: 184 AAKQAELNLLTDEVERAQTRLLSLEREKEQLRSQLQVAH---------TPETNVLERQEI 336
AK E+ ++ ++ERA R +RE E LR QL A+ +V + E+
Sbjct: 234 TAKADEIEMIMTDLERANQRAEVAQREAETLREQLSSANHSLQLASQIQKAPDVEQAIEV 293
Query: 337 ST-STLEVSLIEKEKKISELHVELNNLEMQLSIQQDQHLTELKRLNASVNEKVLAIEELQ 513
T S+LEV L KE++I++L ++ L+ L+ ++ +++ +L ++ K +++L+
Sbjct: 294 LTRSSLEVELAAKEREIAQLVEDVQRLQASLTKLRENSASQISQLEQQLSAKNSTLKQLE 353
Query: 514 K 516
+
Sbjct: 354 E 354
>sp|O14529|CUX2_HUMAN Homeobox protein cut-like 2 OS=Homo sapiens
GN=CUX2 PE=1 SV=3
Length = 1424
Score = 60.8 bits (146), Expect = 4e-09
Identities = 47/180 (26%), Positives = 88/180 (48%), Gaps = 11/180 (6%)
Frame = +1
Query: 10 QRTLAEENQKMLEVLKEREQSLQDQLRAAKETVQNMQRLHEYGQSQLFEFRAQSDEERAA 189
QR AE+ + + EV + +L +L A+E ++ + + Q++L E R + DEE A+
Sbjct: 117 QRNEAEKQKGLQEV----QITLAARLGEAEEKIKVLHSALKATQAELLELRRKYDEEAAS 172
Query: 190 KQAELNLLTDEVERAQTRLLSLEREKEQLRSQLQVAHT-----------PETNVLERQEI 336
K E+ L+ +E+A R + +RE E LR QL ++ P + +
Sbjct: 173 KADEVGLIMTNLEKANQRAEAAQREVESLREQLASVNSSIRLACCSPQGPSGDKVNFTLC 232
Query: 337 STSTLEVSLIEKEKKISELHVELNNLEMQLSIQQDQHLTELKRLNASVNEKVLAIEELQK 516
S LE +L K+++I L ++ +L+ L ++ ++ L + K AIE+L++
Sbjct: 233 SGPRLEAALASKDREILRLLKDVQHLQSSLQELEEASANQIADLERQLTAKSEAIEKLEE 292
>sp|P70298|CUX2_MOUSE Homeobox protein cut-like 2 OS=Mus musculus
GN=Cux2 PE=2 SV=1
Length = 1426
Score = 56.2 bits (134), Expect = 9e-08
Identities = 47/179 (26%), Positives = 84/179 (46%), Gaps = 12/179 (6%)
Frame = +1
Query: 16 TLAEENQ-KMLEVLKEREQSLQDQLRAAKETVQNMQRLHEYGQSQLFEFRAQSDEERAAK 192
TL ++N+ + + L+E +L +L A+E ++ + + Q++L E R + DEE A+K
Sbjct: 113 TLLQKNEAERQKGLQEVHITLAARLGEAEEKIKVLHSALKATQTELLELRRKYDEEAASK 172
Query: 193 QAELNLLTDEVERAQTRLLSLEREKEQLRSQLQVAHT-----------PETNVLERQEIS 339
E+ L+ +E+A R + +RE E LR QL + P + S
Sbjct: 173 ADEVGLIMTNLEKANQRAEAAQREVEGLREQLASVNNSIRLACCSPQGPSGEKVSFALCS 232
Query: 340 TSTLEVSLIEKEKKISELHVELNNLEMQLSIQQDQHLTELKRLNASVNEKVLAIEELQK 516
LE +L K+++I L + L L ++ ++ L + K AIE+LQ+
Sbjct: 233 GPRLEAALASKDREILRLLKDAQQLRHSLQELEEVSANQIADLERQLAAKSEAIEKLQE 291
>sp|P10587|MYH11_CHICK Myosin-11 OS=Gallus gallus GN=MYH11 PE=1 SV=4
Length = 1979
Score = 54.7 bits (130), Expect = 3e-07
Identities = 47/193 (24%), Positives = 97/193 (50%), Gaps = 21/193 (10%)
Frame = +1
Query: 1 EMKQRTLAEENQKMLEV-LKEREQSLQDQLRAAKETVQNMQRLHEYGQSQLFEFRAQSDE 177
E KQR LA +K LEV +K+ E + +A +E ++ +++L Q+Q+ +++ D+
Sbjct: 1614 ERKQRALAAAAKKKLEVDVKDLESQVDSANKAREEAIKQLRKL----QAQMKDYQRDLDD 1669
Query: 178 ERAAKQ-----------------AELNLLTDEVERAQTRLLSLEREKEQLRSQLQVAHTP 306
RAA++ AEL L +++ A+ + EKE++ +L A++
Sbjct: 1670 ARAAREEIFATARENEKKAKNLEAELIQLQEDLAAAERARKQADLEKEEMAEELASANSG 1729
Query: 307 ETNVLERQEISTSTLEVSLIEKEKKISELH--VELNNLEMQLSIQQDQHL-TELKRLNAS 477
T++ + + LE + + E+++ E H +E + M+ ++QQ + L EL A+
Sbjct: 1730 RTSLQDEKR----RLEARIAQLEEELDEEHSNIETMSDRMRKAVQQAEQLNNELATERAT 1785
Query: 478 VNEKVLAIEELQK 516
+ A ++L++
Sbjct: 1786 AQKNENARQQLER 1798
Score = 36.6 bits (83), Expect = 0.073
Identities = 41/178 (23%), Positives = 71/178 (39%), Gaps = 14/178 (7%)
Frame = +1
Query: 25 EENQKMLEVLKEREQS-----------LQDQLRAAKETVQNMQRLHEYGQSQLFEFRAQS 171
E +K LEV + QS L +++ + V+N+ L +S+ +
Sbjct: 1257 EHKKKKLEVQLQDLQSKYSDGERVRTELNEKVHKLQIEVENVTSLLNEAESKNIKLTKDV 1316
Query: 172 DEERAAKQAELNLLTDEVER---AQTRLLSLEREKEQLRSQLQVAHTPETNVLERQEIST 342
+ Q LL +E + T+L LE +K L+ QL E + E
Sbjct: 1317 ATLGSQLQDTQELLQEETRQKLNVTTKLRQLEDDKNSLQEQLD----EEVEAKQNLERHI 1372
Query: 343 STLEVSLIEKEKKISELHVELNNLEMQLSIQQDQHLTELKRLNASVNEKVLAIEELQK 516
STL + L + +KK+ E + +E Q E++ L EK + ++L+K
Sbjct: 1373 STLTIQLSDSKKKLQEFTATVETMEEGKKKLQ----REIESLTQQFEEKAASYDKLEK 1426
Score = 35.0 bits (79), Expect = 0.21
Identities = 47/197 (23%), Positives = 75/197 (38%), Gaps = 24/197 (12%)
Frame = +1
Query: 1 EMKQRTLAEENQKMLEVLKEREQSLQDQLRAAKETVQNMQRLHEYGQSQLFEFRAQSDEE 180
E +RTL ++ ++M L+E E LQ A NMQ + + L Q++E+
Sbjct: 1537 EKSKRTLEQQVEEMKTQLEELEDELQAAEDAKLRLEVNMQAMKSQFERDLQARDEQNEEK 1596
Query: 181 R--AAKQAELNLLTDEVERAQTRLLS-----LEREKEQLRSQLQVAHTPETNV------- 318
R KQ + E ER Q L + LE + + L SQ+ A+
Sbjct: 1597 RRQLLKQLHEHETELEDERKQRALAAAAKKKLEVDVKDLESQVDSANKAREEAIKQLRKL 1656
Query: 319 ----------LERQEISTSTLEVSLIEKEKKISELHVELNNLEMQLSIQQDQHLTELKRL 468
L+ + + + E EKK L EL + +Q+D E R
Sbjct: 1657 QAQMKDYQRDLDDARAAREEIFATARENEKKAKNLEAEL------IQLQEDLAAAERARK 1710
Query: 469 NASVNEKVLAIEELQKN 519
A + ++ +A E N
Sbjct: 1711 QADLEKEEMAEELASAN 1727
Score = 29.6 bits (65), Expect = 9.0
Identities = 42/172 (24%), Positives = 74/172 (43%), Gaps = 9/172 (5%)
Frame = +1
Query: 28 ENQKMLEVLKEREQ---SLQDQLRAAKETVQNMQRLHEYGQSQLFEFRAQSDEER-AAKQ 195
E ++M E L SLQD+ R + + ++ + S + SD R A +Q
Sbjct: 1715 EKEEMAEELASANSGRTSLQDEKRRLEARIAQLEEELDEEHSNI---ETMSDRMRKAVQQ 1771
Query: 196 AEL--NLLTDEVERAQTR---LLSLEREKEQLRSQLQVAHTPETNVLERQEISTSTLEVS 360
AE N L E AQ LER+ ++LRS+LQ E + S + +
Sbjct: 1772 AEQLNNELATERATAQKNENARQQLERQNKELRSKLQ----------EMEGAVKSKFKST 1821
Query: 361 LIEKEKKISELHVELNNLEMQLSIQQDQHLTELKRLNASVNEKVLAIEELQK 516
+ E KI+ L +L Q + ++ L++ + + + +L +E+ +K
Sbjct: 1822 IAALEAKIASLEEQLE----QEAREKQAAAKTLRQKDKKLKDALLQVEDERK 1869
>sp|Q9PTD7|CING_XENLA Cingulin OS=Xenopus laevis GN=cgn PE=1 SV=2
Length = 1360
Score = 53.5 bits (127), Expect = 6e-07
Identities = 46/193 (23%), Positives = 90/193 (46%), Gaps = 37/193 (19%)
Frame = +1
Query: 46 EVLKEREQSLQDQLRAAKETVQNMQRLHEYGQSQLFEFRAQSDEERAAKQAELNLLTDEV 225
+++ +R QSL+ + + K + R + + +L A+ DEE+ + LLTD V
Sbjct: 1099 QMISQRLQSLEQDIESKKRVQDDRSRQVKVLEDKLKRMEAELDEEKNT----VELLTDRV 1154
Query: 226 ERAQTRL---------------------LSLEREKEQLRSQL---QVAHTPETNV----- 318
R++ ++ +SLER+ ++L+++L + P NV
Sbjct: 1155 NRSRDQMEQQRAELNQERSRGQDLECDKISLERQNKELKNRLASMEGQQKPSVNVSHLEA 1214
Query: 319 --------LERQEISTSTLEVSLIEKEKKISELHVELNNLEMQLSIQQDQHLTELKRLNA 474
L+ +E +TL + + E+K+ EL+++L + +Q++ Q+DQ +K L
Sbjct: 1215 KLQEIQERLQLEEREKATLLSTNRKLERKLKELNIQLEDERLQVNDQKDQLNLRVKALKR 1274
Query: 475 SVNEKVLAIEELQ 513
V+E IE L+
Sbjct: 1275 QVDEAEEEIERLE 1287
|
|
|
Link to BlastX Result : TrEMBL |
|
|
tr|A9T5I6|A9T5I6_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
|
|
173 |
|
|
215.0 |
|
|
1.0e-54 |
|
|
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK943501|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_A14, 5'
(519 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|A9T5I6|A9T5I6_PHYPA Predicted protein OS=Physcomitrella paten... 215 1e-54
tr|A9RBZ8|A9RBZ8_PHYPA Predicted protein OS=Physcomitrella paten... 213 3e-54
tr|A7PGQ5|A7PGQ5_VITVI Chromosome chr17 scaffold_16, whole genom... 200 4e-50
tr|Q53RI9|Q53RI9_ORYSJ CASP C terminal, putative (Putative uncha... 184 3e-45
tr|Q10E21|Q10E21_ORYSJ Expressed protein OS=Oryza sativa subsp. ... 184 3e-45
tr|Q0DP72|Q0DP72_ORYSJ Os03g0710900 protein OS=Oryza sativa subs... 184 3e-45
tr|Q54R70|Q54R70_DICDI C-terminal CASP domain-containing protein... 83 9e-15
tr|Q3UMF6|Q3UMF6_MOUSE Putative uncharacterized protein (Fragmen... 76 9e-13
tr|Q6DI42|Q6DI42_DANRE Cut-like 1 (Drosophila) OS=Danio rerio GN... 76 1e-12
tr|B4DZZ2|B4DZZ2_HUMAN cDNA FLJ57247, highly similar to Protein ... 76 1e-12
tr|Q6AXG1|Q6AXG1_MOUSE Cux1 protein OS=Mus musculus GN=Cux1 PE=2... 75 3e-12
tr|Q5BL05|Q5BL05_MOUSE Cut-like homeobox 1 OS=Mus musculus GN=Cu... 75 3e-12
tr|Q5RF66|Q5RF66_PONAB Putative uncharacterized protein DKFZp469... 74 3e-12
tr|Q86UJ7|Q86UJ7_HUMAN Putative uncharacterized protein CUTL1 (F... 74 3e-12
tr|B3KWH8|B3KWH8_HUMAN cDNA FLJ43107 fis, clone CTONG2020108, hi... 74 3e-12
tr|B3KWH3|B3KWH3_HUMAN cDNA FLJ43086 fis, clone BRTHA3019048, hi... 74 3e-12
tr|B3KV79|B3KV79_HUMAN cDNA FLJ16230 fis, clone FEBRA2025249, hi... 74 3e-12
tr|Q90765|Q90765_CHICK CASP protein (Fragment) OS=Gallus gallus ... 73 1e-11
tr|Q2HJD6|Q2HJD6_BOVIN CUX1 protein (Fragment) OS=Bos taurus GN=... 73 1e-11
tr|A7T385|A7T385_NEMVE Predicted protein (Fragment) OS=Nematoste... 70 6e-11
tr|A8N760|A8N760_COPC7 Putative uncharacterized protein OS=Copri... 70 8e-11
tr|Q9JJB6|Q9JJB6_MOUSE Brain cDNA, clone MNCb-2844, similar to M... 69 1e-10
tr|Q3LIA3|Q3LIA3_HUMAN Putative uncharacterized protein Nbla1031... 68 2e-10
tr|Q4SPL9|Q4SPL9_TETNG Chromosome 16 SCAF14537, whole genome sho... 66 9e-10
tr|A0EHS3|A0EHS3_PARTE Chromosome undetermined scaffold_97, whol... 65 3e-09
tr|B6MMP4|B6MMP4_BRAFL Putative uncharacterized protein OS=Branc... 63 8e-09
tr|A7E2Y4|A7E2Y4_HUMAN Cut-like homeobox 2 OS=Homo sapiens GN=CU... 61 4e-08
tr|Q4P0S9|Q4P0S9_USTMA Putative uncharacterized protein OS=Ustil... 60 5e-08
tr|B5DE16|B5DE16_XENTR Cux2 protein OS=Xenopus tropicalis GN=cux... 58 3e-07
tr|Q6P1E6|Q6P1E6_MOUSE Cut-like homeobox 2 OS=Mus musculus GN=Cu... 57 4e-07
>tr|A9T5I6|A9T5I6_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_88353 PE=4 SV=1
Length = 763
Score = 215 bits (547), Expect = 1e-54
Identities = 114/173 (65%), Positives = 141/173 (81%), Gaps = 1/173 (0%)
Frame = +1
Query: 1 EMKQRTLAEENQKMLEVLKEREQSLQDQLRAAKETVQNMQRLHEYGQSQLFEFRAQSDEE 180
EMKQR+LAEENQK LE+L++RE+ LQ QLRAAKE+VQNMQRLHEYGQSQLFE RAQS+E
Sbjct: 250 EMKQRSLAEENQKSLEILRDREEFLQGQLRAAKESVQNMQRLHEYGQSQLFELRAQSEEI 309
Query: 181 RAAKQAELNLLTDEVERAQTRLLSLEREKEQLRSQLQVAHTPETNVLER-QEISTSTLEV 357
A KQ+ELNLLTDEV+RAQ RLLSLEREKEQLRSQLQ H+ ++ + ER E + S+LE
Sbjct: 310 SANKQSELNLLTDEVDRAQARLLSLEREKEQLRSQLQAVHSQDSQLQERLDEEANSSLEA 369
Query: 358 SLIEKEKKISELHVELNNLEMQLSIQQDQHLTELKRLNASVNEKVLAIEELQK 516
SL KEK ISELH EL+ +E L +++QH+ E+K+L A ++EK A+EELQ+
Sbjct: 370 SLTAKEKIISELHHELHTMETSLGSEREQHIAEVKKLKALLSEKDTALEELQR 422
>tr|A9RBZ8|A9RBZ8_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_111119 PE=4 SV=1
Length = 691
Score = 213 bits (543), Expect = 3e-54
Identities = 114/173 (65%), Positives = 141/173 (81%), Gaps = 1/173 (0%)
Frame = +1
Query: 1 EMKQRTLAEENQKMLEVLKEREQSLQDQLRAAKETVQNMQRLHEYGQSQLFEFRAQSDEE 180
EMKQR+LAEENQK +E+++ERE LQ+QLRAAKE+VQNMQRLHEYGQ+QLF AQS+E
Sbjct: 196 EMKQRSLAEENQKNIEIIREREAFLQNQLRAAKESVQNMQRLHEYGQTQLFNLHAQSEEV 255
Query: 181 RAAKQAELNLLTDEVERAQTRLLSLEREKEQLRSQLQVAHTPETNVLER-QEISTSTLEV 357
AAKQ+ELNLLTDEV+R+Q RLLSLEREKEQLRS+LQ + E ++ ER E ++S LEV
Sbjct: 256 SAAKQSELNLLTDEVDRSQARLLSLEREKEQLRSELQAVNNQEVHLQERLNEEASSNLEV 315
Query: 358 SLIEKEKKISELHVELNNLEMQLSIQQDQHLTELKRLNASVNEKVLAIEELQK 516
SL KEK ISELH EL+ +E LS +++QHL E+KRLNA +NEK L ++ LQK
Sbjct: 316 SLKAKEKIISELHYELHTIESTLSNEREQHLVEVKRLNALLNEKDLVLQVLQK 368
>tr|A7PGQ5|A7PGQ5_VITVI Chromosome chr17 scaffold_16, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00017645001
PE=4 SV=1
Length = 684
Score = 200 bits (508), Expect = 4e-50
Identities = 110/172 (63%), Positives = 136/172 (79%)
Frame = +1
Query: 1 EMKQRTLAEENQKMLEVLKEREQSLQDQLRAAKETVQNMQRLHEYGQSQLFEFRAQSDEE 180
EMKQR+LAEENQK LEVLKERE+ LQDQLR AKE+V NMQ+LHE QSQ+FE RAQS+E+
Sbjct: 186 EMKQRSLAEENQKTLEVLKERERLLQDQLRQAKESVSNMQKLHELAQSQMFELRAQSEED 245
Query: 181 RAAKQAELNLLTDEVERAQTRLLSLEREKEQLRSQLQVAHTPETNVLERQEISTSTLEVS 360
AAKQ+E++LL DEVERAQT LLSLEREK LRS+LQ A+ S S LE S
Sbjct: 246 TAAKQSEVSLLMDEVERAQTLLLSLEREKGLLRSKLQSANDENGQKKSDNLDSNSILENS 305
Query: 361 LIEKEKKISELHVELNNLEMQLSIQQDQHLTELKRLNASVNEKVLAIEELQK 516
L KEK ISEL++EL+N+E+ LS +++QH+ E+KRLNA +NEK LA+EE++K
Sbjct: 306 LSAKEKIISELNMELHNIEITLSNEREQHVNEIKRLNALLNEKDLALEEIKK 357
>tr|Q53RI9|Q53RI9_ORYSJ CASP C terminal, putative (Putative
uncharacterized protein) OS=Oryza sativa subsp. japonica
GN=OsJ_011818 PE=4 SV=1
Length = 687
Score = 184 bits (466), Expect = 3e-45
Identities = 101/172 (58%), Positives = 131/172 (76%)
Frame = +1
Query: 1 EMKQRTLAEENQKMLEVLKEREQSLQDQLRAAKETVQNMQRLHEYGQSQLFEFRAQSDEE 180
EMKQR+LAE++QK LE LK+RE++LQDQLR A E+V+NMQ+LHE QSQLFE R QS+E+
Sbjct: 170 EMKQRSLAEDSQKTLEALKDRERALQDQLRQATESVKNMQKLHESAQSQLFELRTQSEED 229
Query: 181 RAAKQAELNLLTDEVERAQTRLLSLEREKEQLRSQLQVAHTPETNVLERQEISTSTLEVS 360
RAAK+ E+NLL DEVERAQ RL+SLEREK LRSQLQ + TN + + S+ LE S
Sbjct: 230 RAAKETEVNLLLDEVERAQARLVSLEREKGDLRSQLQTTNEDATNSSDYVD-SSDILESS 288
Query: 361 LIEKEKKISELHVELNNLEMQLSIQQDQHLTELKRLNASVNEKVLAIEELQK 516
L KEK ISEL+ EL ++E LS +++ H+ ELK+L A ++EK A+ EL+K
Sbjct: 289 LNAKEKIISELNAELRSIENTLSSERETHVNELKKLTALLSEKENALTELKK 340
>tr|Q10E21|Q10E21_ORYSJ Expressed protein OS=Oryza sativa subsp.
japonica GN=LOC_Os03g50300 PE=4 SV=1
Length = 668
Score = 184 bits (466), Expect = 3e-45
Identities = 101/172 (58%), Positives = 131/172 (76%)
Frame = +1
Query: 1 EMKQRTLAEENQKMLEVLKEREQSLQDQLRAAKETVQNMQRLHEYGQSQLFEFRAQSDEE 180
EMKQR+LAE++QK LE LK+RE++LQDQLR A E+V+NMQ+LHE QSQLFE R QS+E+
Sbjct: 170 EMKQRSLAEDSQKTLEALKDRERALQDQLRQATESVKNMQKLHESAQSQLFELRTQSEED 229
Query: 181 RAAKQAELNLLTDEVERAQTRLLSLEREKEQLRSQLQVAHTPETNVLERQEISTSTLEVS 360
RAAK+ E+NLL DEVERAQ RL+SLEREK LRSQLQ + TN + + S+ LE S
Sbjct: 230 RAAKETEVNLLLDEVERAQARLVSLEREKGDLRSQLQTTNEDATNSSDYVD-SSDILESS 288
Query: 361 LIEKEKKISELHVELNNLEMQLSIQQDQHLTELKRLNASVNEKVLAIEELQK 516
L KEK ISEL+ EL ++E LS +++ H+ ELK+L A ++EK A+ EL+K
Sbjct: 289 LNAKEKIISELNAELRSIENTLSSERETHVNELKKLTALLSEKENALTELKK 340
>tr|Q0DP72|Q0DP72_ORYSJ Os03g0710900 protein OS=Oryza sativa subsp.
japonica GN=Os03g0710900 PE=4 SV=1
Length = 664
Score = 184 bits (466), Expect = 3e-45
Identities = 101/172 (58%), Positives = 131/172 (76%)
Frame = +1
Query: 1 EMKQRTLAEENQKMLEVLKEREQSLQDQLRAAKETVQNMQRLHEYGQSQLFEFRAQSDEE 180
EMKQR+LAE++QK LE LK+RE++LQDQLR A E+V+NMQ+LHE QSQLFE R QS+E+
Sbjct: 202 EMKQRSLAEDSQKTLEALKDRERALQDQLRQATESVKNMQKLHESAQSQLFELRTQSEED 261
Query: 181 RAAKQAELNLLTDEVERAQTRLLSLEREKEQLRSQLQVAHTPETNVLERQEISTSTLEVS 360
RAAK+ E+NLL DEVERAQ RL+SLEREK LRSQLQ + TN + + S+ LE S
Sbjct: 262 RAAKETEVNLLLDEVERAQARLVSLEREKGDLRSQLQTTNEDATNSSDYVD-SSDILESS 320
Query: 361 LIEKEKKISELHVELNNLEMQLSIQQDQHLTELKRLNASVNEKVLAIEELQK 516
L KEK ISEL+ EL ++E LS +++ H+ ELK+L A ++EK A+ EL+K
Sbjct: 321 LNAKEKIISELNAELRSIENTLSSERETHVNELKKLTALLSEKENALTELKK 372
>tr|Q54R70|Q54R70_DICDI C-terminal CASP domain-containing protein
(Similar to CCAAT displacement protein) OS=Dictyostelium
discoideum GN=scdA PE=4 SV=1
Length = 861
Score = 82.8 bits (203), Expect = 9e-15
Identities = 49/172 (28%), Positives = 98/172 (56%)
Frame = +1
Query: 4 MKQRTLAEENQKMLEVLKEREQSLQDQLRAAKETVQNMQRLHEYGQSQLFEFRAQSDEER 183
+K++ L +E Q+ L+ K+REQ LQ Q ++ + + + Q+QL + + + ++E
Sbjct: 245 LKEQELKQEFQQQLQASKQREQQLQKQNDQLQDELTKISITNNQIQNQLLDIKTKYEDEL 304
Query: 184 AAKQAELNLLTDEVERAQTRLLSLEREKEQLRSQLQVAHTPETNVLERQEISTSTLEVSL 363
+K +E+ +LT E +R Q++L +L+RE +R + V T +++R + LE+ +
Sbjct: 305 QSKHSEIEMLTVEFDRVQSKLTTLQRENLSIREESMVEKNSLTPMVKR----VADLELEM 360
Query: 364 IEKEKKISELHVELNNLEMQLSIQQDQHLTELKRLNASVNEKVLAIEELQKN 519
++KE + S+L ++ L+ +S QQD+ + L RL EKV +++ +N
Sbjct: 361 LQKETETSKLVDQIQELKTHISTQQDEK-SNLSRLYEIEKEKVEKLDKYIQN 411
>tr|Q3UMF6|Q3UMF6_MOUSE Putative uncharacterized protein (Fragment)
OS=Mus musculus GN=Cux1 PE=2 SV=1
Length = 445
Score = 76.3 bits (186), Expect = 9e-13
Identities = 48/182 (26%), Positives = 96/182 (52%), Gaps = 18/182 (9%)
Frame = +1
Query: 25 EENQKMLEVLKEREQSLQD-------QLRAAKETVQNMQRLHEYGQSQLFEFRAQSDEER 183
E+ QK+ E+E+ LQ+ +L A+ +Q +Q E +++LF+ + + DEE
Sbjct: 259 EKEQKLQNDFAEKERKLQETQMSTTSKLEEAEHKLQTLQTALEKTRTELFDLKTKYDEET 318
Query: 184 AAKQAELNLLTDEVERAQTRLLSLEREKEQLRSQL-----------QVAHTPETNVLERQ 330
AK E+ ++ ++ERA R +RE E LR QL Q+ P+ + +
Sbjct: 319 TAKADEIEMIMTDLERANQRAEVAQREAETLREQLSSANHSLQLASQIQKAPDVAI---E 375
Query: 331 EISTSTLEVSLIEKEKKISELHVELNNLEMQLSIQQDQHLTELKRLNASVNEKVLAIEEL 510
++ S+LEV L KE++I++L ++ L+ L+ ++ +++ +L +N K +++L
Sbjct: 376 VLTRSSLEVELAAKEREIAQLVEDVQRLQASLTKLRENSASQISQLEQQLNAKNSTLKQL 435
Query: 511 QK 516
++
Sbjct: 436 EE 437
>tr|Q6DI42|Q6DI42_DANRE Cut-like 1 (Drosophila) OS=Danio rerio
GN=cutl1 PE=2 SV=1
Length = 672
Score = 75.9 bits (185), Expect = 1e-12
Identities = 50/180 (27%), Positives = 96/180 (53%), Gaps = 10/180 (5%)
Frame = +1
Query: 7 KQRTLAEENQKMLEVLKEREQSLQDQLRAAKETVQNMQRLHEYGQSQLFEFRAQSDEERA 186
KQ+ + ++ + L+E ++SL +L+ A+ Q +Q E Q++LF+ + ++DEE
Sbjct: 175 KQQQIHKDYTEKERRLQESQESLVCKLQEAELKAQTLQTALERTQTELFDLKTKNDEEST 234
Query: 187 AKQAELNLLTDEVERAQTRLLSLEREKEQLRSQLQVA--------HTPETNVLER--QEI 336
AK E++++ ++ERA R + ER E LR QL +A T ET + +
Sbjct: 235 AKADEIDMVMIDLERANQRAEAAERAAEALREQLMLAGKSSQLPTRTDETPYADECVDLV 294
Query: 337 STSTLEVSLIEKEKKISELHVELNNLEMQLSIQQDQHLTELKRLNASVNEKVLAIEELQK 516
S+LE L KE+++ +L ++ L+ LS ++ T++ +L + K A+ +L++
Sbjct: 295 PRSSLEAELSAKEREMLQLVEDVQRLQASLSALRENTHTQISQLQQQLTMKTTALTQLEE 354
>tr|B4DZZ2|B4DZZ2_HUMAN cDNA FLJ57247, highly similar to Protein
CASP OS=Homo sapiens PE=2 SV=1
Length = 639
Score = 75.9 bits (185), Expect = 1e-12
Identities = 48/182 (26%), Positives = 97/182 (53%), Gaps = 18/182 (9%)
Frame = +1
Query: 25 EENQKMLEVLKEREQSLQD-------QLRAAKETVQNMQRLHEYGQSQLFEFRAQSDEER 183
E+ QK+ E+E+ LQ+ +L A+ VQ++Q E +++LF+ + + DEE
Sbjct: 137 EKEQKLQNDFAEKERKLQETQMSTTSKLEEAEHKVQSLQTALEKTRTELFDLKTKYDEET 196
Query: 184 AAKQAELNLLTDEVERAQTRLLSLEREKEQLRSQL-----------QVAHTPETNVLERQ 330
AK E+ ++ ++ERA R +RE E LR QL Q+ P+ + +
Sbjct: 197 TAKADEIEMIMTDLERANQRAEVAQREAETLREQLSSANHSLQLASQIQKAPDVAI---E 253
Query: 331 EISTSTLEVSLIEKEKKISELHVELNNLEMQLSIQQDQHLTELKRLNASVNEKVLAIEEL 510
++ S+LEV L KE++I++L ++ L+ L+ ++ +++ +L ++ K +++L
Sbjct: 254 VLTRSSLEVELAAKEREIAQLVEDVQRLQASLTKLRENSASQISQLEQQLSAKNSTLKQL 313
Query: 511 QK 516
++
Sbjct: 314 EE 315
|
|
|
YMU02A01NGRL0003_A15
|
511
|
Adiantum capillus-veneris mRNA for unknowm protein.
|
DK943502
|
CL1629Contig1
|
|
|
DK943502
|
|
|
YMU02A01NGRL0003_A15 |
|
|
YMU02 |
|
|
511 |
|
|
Adiantum capillus-veneris mRNA for unknowm protein. |
|
|
DK943502 |
|
|
young leaves |
|
|
CL1629Contig1 |
|
|
GTTTTTTCTAATGGATGGCTGAGCGCAAGGAGCGAAAGCTGACTGAACTGGAGAGCCAAC
AGGCCATAACAAAGATGAAAAGAGAACTCATAGCTGACAATCGGAAAAAGGGGCTGACCG
AGTCTTGGTAGCTCCATCAACAGACTATAATCCAGATTGTTGCGTGTTGTTATGTACAAA
AATGGAAGATTTCAAAGGATTTCGAAATAACTATAACACTTTGACCTTCAGCAAATTTAG
AGAAACCTCAGTTAGTCTTGCAATAGTTTTCATCATATGGTGGGGTTACTACCTGTACTG
TTACTTGTATCCAGTTCTATCGAAGGTGTTTGATATATATCCTTCTGAAGGAGGCTTTGT
GCAAAAGCATCACCGCACGAAAATACAAACTGCGTCGCACATTAGCTTTGTGCATGCAGA
GCTCGCTTGCTGCAAGCTCATGCACAGAGGTGTTTCCTTTGACGAGACCATATTTTTGTT
TTGTTCCAGTAAGCACGCACGTGTGGAGCCA |
|
|
- |
|
|
Link to BlastX Result : Swiss-Prot |
|
|
sp|Q04585|YDR09_YEAST Uncharacterized sugar kinase YDR109C OS=Saccharomyces cerevisiae |
|
|
48 |
|
|
30.0 |
|
|
6.5 |
|
|
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK943502|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_A15, 5'
(511 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q04585|YDR09_YEAST Uncharacterized sugar kinase YDR109C OS=Sa... 30 6.5
sp|P90648|MHCKB_DICDI Myosin heavy chain kinase B OS=Dictyosteli... 30 8.5
>sp|Q04585|YDR09_YEAST Uncharacterized sugar kinase YDR109C
OS=Saccharomyces cerevisiae GN=YDR109C PE=1 SV=1
Length = 715
Score = 30.0 bits (66), Expect = 6.5
Identities = 16/48 (33%), Positives = 28/48 (58%), Gaps = 2/48 (4%)
Frame = -2
Query: 510 GSTRACLLEQNKNMVSSKETPLCMS--LQQASSACTKLMCDAVCIFVR 373
GS RAC+++Q+ NM+S E P+ + + ++ + +AVC VR
Sbjct: 48 GSARACVIDQSGNMLSLAEKPIKREQLISNFITQSSREIWNAVCYCVR 95
>sp|P90648|MHCKB_DICDI Myosin heavy chain kinase B OS=Dictyostelium
discoideum GN=mhkB PE=2 SV=1
Length = 732
Score = 29.6 bits (65), Expect = 8.5
Identities = 19/75 (25%), Positives = 31/75 (41%)
Frame = +2
Query: 194 KGFRNNYNTLTFSKFRETSVSLAIVFIIWWGYYLYCYLYPVLSKVFDIYPSEGGFVQKHH 373
K + + YN+ K E S + F+ L C P + + Y + GFV
Sbjct: 194 KKWADKYNSFKPPKKIEFLQSCVLEFVDRTSSDLICGAEPYVEGQYRKYNNNSGFVSNDE 253
Query: 374 RTKIQTASHISFVHA 418
R Q+ SH ++ H+
Sbjct: 254 RNTPQSFSHFTYEHS 268
|
|
|
Link to BlastX Result : TrEMBL |
|
|
tr|B6PRW8|B6PRW8_BRAFL Putative uncharacterized protein OS=Branchiostoma floridae |
|
|
73 |
|
|
35.0 |
|
|
2.1 |
|
|
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK943502|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_A15, 5'
(511 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|B6PRW8|B6PRW8_BRAFL Putative uncharacterized protein OS=Branc... 35 2.1
tr|Q82337|Q82337_9DELA Tax protein (Fragment) OS=Human T-lymphot... 33 8.1
tr|A2BUT3|A2BUT3_PROM5 Selenide,water dikinase OS=Prochlorococcu... 33 8.1
tr|Q7XS42|Q7XS42_ORYSJ OSJNBa0074L08.6 protein OS=Oryza sativa s... 33 8.1
tr|Q0JBJ6|Q0JBJ6_ORYSJ Os04g0528600 protein OS=Oryza sativa subs... 33 8.1
tr|Q01HN1|Q01HN1_ORYSA OSIGBa0115K01-H0319F09.21 protein OS=Oryz... 33 8.1
tr|B8ASC4|B8ASC4_ORYSI Putative uncharacterized protein OS=Oryza... 33 8.1
>tr|B6PRW8|B6PRW8_BRAFL Putative uncharacterized protein
OS=Branchiostoma floridae GN=BRAFLDRAFT_110226 PE=4 SV=1
Length = 387
Score = 35.0 bits (79), Expect = 2.1
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 6/73 (8%)
Frame = +3
Query: 18 AERKERKLTEL-ESQQAITKMKRELIADNRKKGLTESW*LHQQTIIQIVACCYV-----Q 179
AE +++ L E+ E I M+ +L+A+ RK+G T +W Q QI C+ Q
Sbjct: 291 AELRQQWLVEVKEMADRIITMREQLVANLRKEGSTHNW---QHITDQIGMFCFTGLKQQQ 347
Query: 180 KWKISKDFEITIT 218
K++KDF + +T
Sbjct: 348 VEKLTKDFSVFLT 360
>tr|Q82337|Q82337_9DELA Tax protein (Fragment) OS=Human
T-lymphotropic virus 1 GN=tax PE=4 SV=1
Length = 236
Score = 33.1 bits (74), Expect = 8.1
Identities = 24/93 (25%), Positives = 38/93 (40%), Gaps = 14/93 (15%)
Frame = +2
Query: 119 RVLVAPSTDYNPDCCVLLCTKMEDFKGFRNNYNTLTFSK------FRETSVSLAIVFIIW 280
+VL P+TD P+ M + FRN Y T + F + + ++ +W
Sbjct: 69 KVLTPPTTDTTPNIPPSFLQAMRKYSPFRNGYMEPTLGQHLPTLSFPDPGLRPQNLYTLW 128
Query: 281 WGYYLYCYLY--------PVLSKVFDIYPSEGG 355
G + YLY P+L V +PS+ G
Sbjct: 129 GGSVVCMYLYQLSPPITWPLLPHVIFCHPSQLG 161
>tr|A2BUT3|A2BUT3_PROM5 Selenide,water dikinase OS=Prochlorococcus
marinus (strain MIT 9515) GN=P9515_03351 PE=4 SV=1
Length = 722
Score = 33.1 bits (74), Expect = 8.1
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = -2
Query: 207 FRNPLKSSIFVHNNTQQSGL*SVDGATKTRSAPFSDCQL*VLFS-SLLWPVGSPVQSAFA 31
F + ++ ++NN Q++ L SVDG S P+ + ++ VL + S LW G+ + S A
Sbjct: 391 FATSPEDAVQIYNNNQETILQSVDGFPALISDPWLNAKITVLHACSDLWACGAKLSSVQA 450
Query: 30 PCAQPSIRKN 1
+ P + K+
Sbjct: 451 LISLPKVGKD 460
>tr|Q7XS42|Q7XS42_ORYSJ OSJNBa0074L08.6 protein OS=Oryza sativa
subsp. japonica GN=OSJNBa0074L08.6 PE=4 SV=2
Length = 984
Score = 33.1 bits (74), Expect = 8.1
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 7/55 (12%)
Frame = +2
Query: 65 HNKDEKRTHS*QSEKGA--DRVLVAPSTDYN-----PDCCVLLCTKMEDFKGFRN 208
+N+ +RTH Q+ K D V+ +P +Y PDCC +LCT+ ++ +N
Sbjct: 625 NNEGTRRTHCIQNVKKRRFDDVINSPDVEYFGHSTFPDCCKVLCTQTDNLYNAKN 679
>tr|Q0JBJ6|Q0JBJ6_ORYSJ Os04g0528600 protein OS=Oryza sativa subsp.
japonica GN=Os04g0528600 PE=4 SV=1
Length = 1645
Score = 33.1 bits (74), Expect = 8.1
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 7/55 (12%)
Frame = +2
Query: 65 HNKDEKRTHS*QSEKGA--DRVLVAPSTDYN-----PDCCVLLCTKMEDFKGFRN 208
+N+ +RTH Q+ K D V+ +P +Y PDCC +LCT+ ++ +N
Sbjct: 1286 NNEGTRRTHCIQNVKKRRFDDVINSPDVEYFGHSTFPDCCKVLCTQTDNLYNAKN 1340
>tr|Q01HN1|Q01HN1_ORYSA OSIGBa0115K01-H0319F09.21 protein OS=Oryza
sativa GN=OSIGBa0115K01-H0319F09.21 PE=4 SV=1
Length = 950
Score = 33.1 bits (74), Expect = 8.1
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 7/55 (12%)
Frame = +2
Query: 65 HNKDEKRTHS*QSEKGA--DRVLVAPSTDYN-----PDCCVLLCTKMEDFKGFRN 208
+N+ +RTH Q+ K D V+ +P +Y PDCC +LCT+ ++ +N
Sbjct: 591 NNEGTRRTHCIQNVKKRRFDDVINSPDVEYFGHSTFPDCCKVLCTQTDNLYNAKN 645
>tr|B8ASC4|B8ASC4_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_16730 PE=4 SV=1
Length = 1448
Score = 33.1 bits (74), Expect = 8.1
Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 7/55 (12%)
Frame = +2
Query: 65 HNKDEKRTHS*QSEKGA--DRVLVAPSTDYN-----PDCCVLLCTKMEDFKGFRN 208
+N+ +RTH Q+ K D V+ +P +Y PDCC +LCT+ ++ +N
Sbjct: 1132 NNEGTRRTHCIQNVKKRRFDDVINSPDVEYFGHSTFPDCCKVLCTQTDNLYNAKN 1186
|
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YMU02A01NGRL0003_A16
|
124
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Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0003_A16. 5' end sequence.
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DK943503
|
-
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DK943503
|
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YMU02A01NGRL0003_A16 |
|
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YMU02 |
|
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124 |
|
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Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0003_A16. 5' end sequence. |
|
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DK943503 |
|
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young leaves |
|
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- |
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GCTCCATGTCAATGAGAAAGGAAACACTATTTCTATTGTTTCTCATGACGCTTTTGAGAA
GTCAATAAAGAATTTTGTTTCTGATTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAA |
|
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- |
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|
Link to BlastX Result : Swiss-Prot(No blast op. Sequence too short.) |
|
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- |
|
|
- |
|
|
- |
|
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- |
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Link to BlastX Result : TrEMBL(No blast op. Sequence too short.) |
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- |
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- |
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- |
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- |
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YMU02A01NGRL0003_A17
|
280
|
Adiantum capillus-veneris mRNA for unknowm protein.
|
DK943504
|
CL2075Contig1
|
|
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DK943504
|
|
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YMU02A01NGRL0003_A17 |
|
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YMU02 |
|
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280 |
|
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Adiantum capillus-veneris mRNA for unknowm protein. |
|
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DK943504 |
|
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young leaves |
|
|
CL2075Contig1 |
|
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ATACTTACATGTTGATCCAAACTTTAACTGGTATTCAGTGGATATTCAGATGGAAAGTAT
CAAAACCCTTCTCCCCCTTGATTTCTTGTGGATATTACCAGGTCATGGCAGGCGTGCCAA
ATACAATAATGTGGAAGAAAAGAACAAAGCCATCAATGACTTGCTTGATAGTGTATATGT
GAGGGTATGATCAGTTATTTAATGTATAAGTACAAATTACTGGAAGACAATGCAAAGATA
CCAATTCTACGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
|
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- |
|
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Link to BlastX Result : Swiss-Prot |
|
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sp|Q937U7|SYK_BORGA Lysyl-tRNA synthetase OS=Borrelia garinii |
|
|
43 |
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28.9 |
|
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8.3 |
|
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Link to BlastX Result : TrEMBL |
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tr|A9P038|A9P038_PICSI Putative uncharacterized protein OS=Picea sitchensis |
|
|
51 |
|
|
73.2 |
|
|
6.0e-12 |
|
|
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK943504|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_A17, 5'
(251 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|A9P038|A9P038_PICSI Putative uncharacterized protein OS=Picea... 73 6e-12
tr|A9RJ08|A9RJ08_PHYPA Predicted protein OS=Physcomitrella paten... 63 6e-09
tr|B8LLU2|B8LLU2_PICSI Putative uncharacterized protein OS=Picea... 57 4e-07
tr|A9P172|A9P172_PICSI Putative uncharacterized protein OS=Picea... 57 4e-07
tr|B6UI84|B6UI84_MAIZE Zn-dependent hydrolases, including glyoxy... 55 2e-06
tr|Q6K9T9|Q6K9T9_ORYSJ Os02g0829500 protein OS=Oryza sativa subs... 50 6e-05
tr|Q6K9T8|Q6K9T8_ORYSJ Metallo-beta-lactamase-like OS=Oryza sati... 50 6e-05
tr|B8ACT9|B8ACT9_ORYSI Putative uncharacterized protein OS=Oryza... 50 6e-05
tr|A6N044|A6N044_ORYSI Zn-dependent hydrolase (Fragment) OS=Oryz... 50 6e-05
tr|A3ACZ0|A3ACZ0_ORYSJ Putative uncharacterized protein OS=Oryza... 50 6e-05
tr|Q8RWE1|Q8RWE1_ARATH Putative uncharacterized protein At4g3354... 50 7e-05
tr|O81871|O81871_ARATH Putative uncharacterized protein T16L1.30... 50 7e-05
tr|B8ACT8|B8ACT8_ORYSI Putative uncharacterized protein OS=Oryza... 49 1e-04
tr|A3ACZ1|A3ACZ1_ORYSJ cDNA clone:J013045A06, full insert sequen... 49 1e-04
tr|B0CDW4|B0CDW4_ACAM1 Metallo-beta-lactamase superfamily protei... 45 0.002
tr|Q05S55|Q05S55_9SYNE Metallo-beta-lactamase superfamily hydrol... 43 0.007
tr|B1XPF9|B1XPF9_SYNP2 Metallo-beta-lactamase superfamily hydrol... 43 0.009
tr|B7JZY6|B7JZY6_SYNP8 Beta-lactamase domain protein OS=Synechoc... 42 0.012
tr|B4C4X1|B4C4X1_9CHRO Beta-lactamase domain protein OS=Cyanothe... 42 0.012
tr|B4WN84|B4WN84_9SYNE Metallo-beta-lactamase superfamily protei... 41 0.034
tr|A3IKT6|A3IKT6_9CHRO Putative uncharacterized protein OS=Cyano... 40 0.045
tr|Q7VAK0|Q7VAK0_PROMA Metallo-beta-lactamase superfamily hydrol... 39 0.10
tr|A5GSU8|A5GSU8_SYNR3 Metallo-beta-lactamase superfamily hydrol... 39 0.10
tr|Q024S0|Q024S0_SOLUE Beta-lactamase domain protein OS=Solibact... 39 0.13
tr|Q72MS5|Q72MS5_LEPIC Metallo-beta-lactamase superfamily hydrol... 39 0.17
tr|B4AUQ0|B4AUQ0_9CHRO Beta-lactamase domain protein OS=Cyanothe... 39 0.17
tr|A0YY75|A0YY75_9CYAN Putative uncharacterized protein OS=Lyngb... 39 0.17
tr|B2J6Q1|B2J6Q1_NOSP7 Beta-lactamase domain protein OS=Nostoc p... 38 0.22
tr|A3YXQ9|A3YXQ9_9SYNE Metallo-beta-lactamase superfamily hydrol... 38 0.22
tr|Q3MFG6|Q3MFG6_ANAVT Beta-lactamase-like OS=Anabaena variabili... 38 0.29
>tr|A9P038|A9P038_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 352
Score = 73.2 bits (178), Expect = 6e-12
Identities = 31/51 (60%), Positives = 39/51 (76%)
Frame = +2
Query: 23 FNWYSVDIQMESIKTLLPLDFLWILPGHGRRAKYNNVEEKNKAINDLLDSV 175
+NWYSV+ Q+E+I+ L +DFLWILPGHGRR K+ N+ EKN AI LL V
Sbjct: 298 YNWYSVEKQVENIRPFLQMDFLWILPGHGRRIKFENINEKNAAIEKLLSGV 348
>tr|A9RJ08|A9RJ08_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_175342 PE=4 SV=1
Length = 357
Score = 63.2 bits (152), Expect = 6e-09
Identities = 24/48 (50%), Positives = 39/48 (81%)
Frame = +2
Query: 23 FNWYSVDIQMESIKTLLPLDFLWILPGHGRRAKYNNVEEKNKAINDLL 166
+NWY+V+I +ES++ LLPL+F W+LPGHGRR ++++EE++ I + L
Sbjct: 301 YNWYNVNILLESLQKLLPLEFTWLLPGHGRRRHFSSLEERDVIIKEFL 348
>tr|B8LLU2|B8LLU2_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 346
Score = 57.4 bits (137), Expect = 4e-07
Identities = 28/49 (57%), Positives = 35/49 (71%)
Frame = +2
Query: 26 NWYSVDIQMESIKTLLPLDFLWILPGHGRRAKYNNVEEKNKAINDLLDS 172
N YSV Q+ SI+ LL LDFLWILPGHG+R K+ + +EKN A+ L S
Sbjct: 290 NEYSVTRQVGSIQRLLQLDFLWILPGHGKRLKFKDFKEKNVALERYLAS 338
>tr|A9P172|A9P172_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 328
Score = 57.4 bits (137), Expect = 4e-07
Identities = 28/49 (57%), Positives = 35/49 (71%)
Frame = +2
Query: 26 NWYSVDIQMESIKTLLPLDFLWILPGHGRRAKYNNVEEKNKAINDLLDS 172
N YSV Q+ SI+ LL LDFLWILPGHG+R K+ + +EKN A+ L S
Sbjct: 272 NEYSVTRQVGSIQRLLQLDFLWILPGHGKRLKFKDFKEKNVALERYLAS 320
>tr|B6UI84|B6UI84_MAIZE Zn-dependent hydrolases, including
glyoxylases OS=Zea mays PE=2 SV=1
Length = 328
Score = 55.1 bits (131), Expect = 2e-06
Identities = 25/44 (56%), Positives = 32/44 (72%)
Frame = +2
Query: 35 SVDIQMESIKTLLPLDFLWILPGHGRRAKYNNVEEKNKAINDLL 166
SV +Q+ESI+ LL L+F W+LPGHG R KY +V KN A+ LL
Sbjct: 280 SVSLQLESIRKLLELEFEWLLPGHGYRIKYKDVRAKNVAMESLL 323
>tr|Q6K9T9|Q6K9T9_ORYSJ Os02g0829500 protein OS=Oryza sativa subsp.
japonica GN=OJ1124_D06.11-1 PE=2 SV=1
Length = 326
Score = 50.1 bits (118), Expect = 6e-05
Identities = 22/44 (50%), Positives = 30/44 (68%)
Frame = +2
Query: 35 SVDIQMESIKTLLPLDFLWILPGHGRRAKYNNVEEKNKAINDLL 166
SV +Q++S++ LL LDF W LPGHG R Y +V K+ AI L+
Sbjct: 278 SVGLQLDSMRKLLKLDFEWFLPGHGYRIHYKDVRAKDSAIESLI 321
>tr|Q6K9T8|Q6K9T8_ORYSJ Metallo-beta-lactamase-like OS=Oryza sativa
subsp. japonica GN=OJ1124_D06.11-2 PE=4 SV=1
Length = 211
Score = 50.1 bits (118), Expect = 6e-05
Identities = 22/44 (50%), Positives = 30/44 (68%)
Frame = +2
Query: 35 SVDIQMESIKTLLPLDFLWILPGHGRRAKYNNVEEKNKAINDLL 166
SV +Q++S++ LL LDF W LPGHG R Y +V K+ AI L+
Sbjct: 163 SVGLQLDSMRKLLKLDFEWFLPGHGYRIHYKDVRAKDSAIESLI 206
>tr|B8ACT9|B8ACT9_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_00069 PE=4 SV=1
Length = 326
Score = 50.1 bits (118), Expect = 6e-05
Identities = 22/44 (50%), Positives = 30/44 (68%)
Frame = +2
Query: 35 SVDIQMESIKTLLPLDFLWILPGHGRRAKYNNVEEKNKAINDLL 166
SV +Q++S++ LL LDF W LPGHG R Y +V K+ AI L+
Sbjct: 278 SVGLQLDSMRKLLKLDFEWFLPGHGYRIHYKDVRAKDSAIESLI 321
>tr|A6N044|A6N044_ORYSI Zn-dependent hydrolase (Fragment) OS=Oryza
sativa subsp. indica PE=2 SV=1
Length = 190
Score = 50.1 bits (118), Expect = 6e-05
Identities = 22/44 (50%), Positives = 30/44 (68%)
Frame = +2
Query: 35 SVDIQMESIKTLLPLDFLWILPGHGRRAKYNNVEEKNKAINDLL 166
SV +Q++S++ LL LDF W LPGHG R Y +V K+ AI L+
Sbjct: 142 SVGLQLDSMRKLLKLDFEWFLPGHGYRIHYKDVRAKDSAIESLI 185
>tr|A3ACZ0|A3ACZ0_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_008662 PE=4 SV=1
Length = 265
Score = 50.1 bits (118), Expect = 6e-05
Identities = 22/44 (50%), Positives = 30/44 (68%)
Frame = +2
Query: 35 SVDIQMESIKTLLPLDFLWILPGHGRRAKYNNVEEKNKAINDLL 166
SV +Q++S++ LL LDF W LPGHG R Y +V K+ AI L+
Sbjct: 217 SVGLQLDSMRKLLKLDFEWFLPGHGYRIHYKDVRAKDSAIESLI 260
|
|
|
YMU02A01NGRL0003_A18
|
209
|
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0003_A18. 5' end sequence.
|
DK943505
|
-
|
|
|
DK943505
|
|
|
YMU02A01NGRL0003_A18 |
|
|
YMU02 |
|
|
209 |
|
|
Adiantum capillus-veneris mRNA. clone: YMU02A01NGRL0003_A18. 5' end sequence. |
|
|
DK943505 |
|
|
young leaves |
|
|
- |
|
|
GAGCAGTGGTATCAACGCAGAGTGGCCATTACGGCCGGGGCTAACCAGAGTACAAGGTAC
CAATCCTTTGACTTTTGGATAGTCCAAGAAGTGGGCTGCTGACATTTTTGCGATGCAATC
AGGCTTGCAAGCAATGTATACTGTGTCTGAGATGTAAATGGACTGATAAATTCAATATAT
TCTTTCTGCGACGGTCAAAAAAAAAAAAA |
|
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- |
|
|
Link to BlastX Result : Swiss-Prot |
|
|
sp|Q8CIY2|DUOX1_RAT Dual oxidase 1 OS=Rattus norvegicus |
|
|
32 |
|
|
30.0 |
|
|
3.8 |
|
|
|
|
|
Link to BlastX Result : TrEMBL |
|
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- |
|
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- |
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- |
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- |
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