|
DK943494
|
351
|
hypothetical protein
|
sporophyte
|
CL5Contig1
|
-
|
-
|
Pp1s39_337V6.1
|
92862
|
|
|
DK943494
|
|
|
YMU02A01NGRL0003_A04 |
|
|
YMU02 |
|
|
351 |
|
|
hypothetical protein |
|
|
DK943494 |
|
|
young leaves |
|
|
CL5Contig1 |
|
|
GCACTCTTCATCTTGTCCTTCGGCTCAGAGGGGGCAATTAGGGGAATTCTTGGTGTAGTG
CCATCTCTTGATTTAGAAGTGGTGGTTTCTCTGTTCCTATGGTGTGCTGGATGTTCGTGA
GTTGTAGAAATTCAATAATCAATAATTGGGCTTTCTTGTAAGGTTTTGGAAGTACATTAC
TGCTGTCTATTGTCCCTAAGAGTCTGGTAACAAGAACGCCAGCGTTATTTTCAATCATCA
GTAGACAGGTGTTACATCTACTGCTCTGGTAACAAGAACCCTTTGTATGCTGGATGGTCT
GTGTTAGTTTTTGTTCATCATCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
|
|
- |
|
|
Link to BlastX Result : Swiss-Prot |
|
|
sp|Q9X758|ANSME_KLEPN Anaerobic sulfatase-maturating enzyme OS=Klebsiella pneumoniae |
|
|
27 |
|
|
30.4 |
|
|
2.8 |
|
|
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK943494|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_A04, 5'
(322 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9X758|ANSME_KLEPN Anaerobic sulfatase-maturating enzyme OS=K... 30 2.8
sp|P20714|ANSME_KLEAE Anaerobic sulfatase-maturating enzyme OS=K... 30 2.8
sp|Q08DK9|MUM1_BOVIN Mutated melanoma-associated antigen 1 OS=Bo... 30 3.7
sp|Q492L0|SYR_BLOPB Arginyl-tRNA synthetase OS=Blochmannia penns... 30 4.8
sp|P75612|Y081_MYCPN Putative ABC transporter ATP-binding protei... 29 8.2
>sp|Q9X758|ANSME_KLEPN Anaerobic sulfatase-maturating enzyme
OS=Klebsiella pneumoniae GN=atsB PE=1 SV=1
Length = 395
Score = 30.4 bits (67), Expect = 2.8
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -1
Query: 316 EQKLTQTIQHTKGSCYQSSRCNTCLLM 236
EQ Q HT GSC S+RC + L+M
Sbjct: 256 EQAWAQYFTHTSGSCVHSARCGSNLVM 282
>sp|P20714|ANSME_KLEAE Anaerobic sulfatase-maturating enzyme
OS=Klebsiella aerogenes GN=atsB PE=3 SV=1
Length = 405
Score = 30.4 bits (67), Expect = 2.8
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -1
Query: 316 EQKLTQTIQHTKGSCYQSSRCNTCLLM 236
EQ Q HT GSC S+RC + L+M
Sbjct: 256 EQAWAQYFTHTSGSCVHSARCGSNLVM 282
>sp|Q08DK9|MUM1_BOVIN Mutated melanoma-associated antigen 1 OS=Bos
taurus GN=MUM1 PE=2 SV=1
Length = 641
Score = 30.0 bits (66), Expect = 3.7
Identities = 13/23 (56%), Positives = 15/23 (65%)
Frame = -3
Query: 89 ETTTSKSRDGTTPRIPLIAPSEP 21
E S SR+GTTPR P + P EP
Sbjct: 100 ERQGSSSREGTTPRPPRVKPMEP 122
>sp|Q492L0|SYR_BLOPB Arginyl-tRNA synthetase OS=Blochmannia
pennsylvanicus (strain BPEN) GN=argS PE=3 SV=1
Length = 581
Score = 29.6 bits (65), Expect = 4.8
Identities = 15/42 (35%), Positives = 22/42 (52%)
Frame = -1
Query: 196 GTIDSSNVLPKPYKKAQLLIIEFLQLTNIQHTIGTEKPPLLN 71
G I S L P ++ I+F+ L ++ HTI EKP +N
Sbjct: 44 GLIAISKKLNIPIEEFAKKFIQFINLNDVAHTIKIEKPGFIN 85
>sp|P75612|Y081_MYCPN Putative ABC transporter ATP-binding protein
MG065 homolog OS=Mycoplasma pneumoniae GN=MPN_081 PE=3
SV=1
Length = 465
Score = 28.9 bits (63), Expect = 8.2
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = -1
Query: 157 KKAQLLIIEFLQLTNIQHTIGTEKPPLLNQEMAL 56
K QL+ QLTN+ + I T KPPL Q+ L
Sbjct: 159 KTEQLINARNTQLTNLLNKIATTKPPLNKQQRLL 192
|
|
|
Link to BlastX Result : TrEMBL |
|
|
tr|B0X0H6|B0X0H6_CULQU Predicted protein OS=Culex quinquefasciatus |
|
|
76 |
|
|
38.1 |
|
|
0.22 |
|
|
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK943494|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_A04, 5'
(322 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|B0X0H6|B0X0H6_CULQU Predicted protein OS=Culex quinquefasciat... 38 0.22
>tr|B0X0H6|B0X0H6_CULQU Predicted protein OS=Culex quinquefasciatus
GN=CpipJ_CPIJ013022 PE=4 SV=1
Length = 142
Score = 38.1 bits (87), Expect = 0.22
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = -1
Query: 322 DDEQKLTQTIQHT-KGSCY-QSSRCNTCLLMIENNAGVLVTRLLGTIDSSNVLPKPYKKA 149
D E KL QT++H +G Y + +RC+ ++E G G + P+P +
Sbjct: 11 DPEAKLLQTVRHCLEGDSYLRRARCDMRRKVLETIQGTGENLFAGNTADQQLPPRPIRLI 70
Query: 148 QLLIIEFLQLTNIQHT 101
LI+E+L N+Q+T
Sbjct: 71 NQLILEYLDWYNLQYT 86
|
|
|
- |
|
|
- |
|
|
Pp1s39_337V6.1 |
|
|
92862 |
|
|
DK943506
|
231
|
hypothetical protein
|
sporophyte
|
-
|
-
|
-
|
Pp1s14_246V6.1
|
-
|
|
|
DK943506
|
|
|
YMU02A01NGRL0003_A19 |
|
|
YMU02 |
|
|
231 |
|
|
hypothetical protein |
|
|
DK943506 |
|
|
young leaves |
|
|
- |
|
|
AGGCGACTTCTTCAGCTCTAGTAGTAATTGATCCTCAAGCTAACAAATTGTAATTGATTG
CAAGTGGTTGTATGCTTAATGTTACGCCATTGCTGTGCTACTAGTGATAAATGCTACTAG
TGATAAAAGGCCGTTCGCTGTGCTTGTTATCACCCACTCACTCTTAACTCATGGAGAAAT
GCAATGAAATTGTTTCCTGTCGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
|
|
- |
|
|
Link to BlastX Result : Swiss-Prot |
|
|
sp|Q9PUH5|PA29_AUSSU Phospholipase A2 isozyme S11-61 OS=Austrelaps superbus |
|
|
32 |
|
|
31.2 |
|
|
1.7 |
|
|
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK943506|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_A19, 5'
(202 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9PUH5|PA29_AUSSU Phospholipase A2 isozyme S11-61 OS=Austrela... 31 1.7
sp|Q9PUH6|PA28_AUSSU Phospholipase A2 isozyme S10-58F OS=Austrel... 31 1.7
sp|Q9PUH7|PA27_AUSSU Phospholipase A2 isozyme S15-109 OS=Austrel... 31 1.7
sp|P20250|PA2G_PSEAU Phospholipase A2 isozyme PA-1G OS=Pseudechi... 31 2.2
sp|P20256|PA2C_PSEAU Phospholipase A2 isozyme PA-12C OS=Pseudech... 30 3.8
sp|P20258|PA2A_PSEPO Phospholipase A2 OS=Pseudechis porphyriacus... 30 3.8
sp|P20253|PA29_PSEAU Phospholipase A2 isozyme PA-9C OS=Pseudechi... 30 3.8
sp|P20251|PA23_PSEAU Phospholipase A2 isozyme PA-3 OS=Pseudechis... 29 8.4
sp|P08873|PA20_NOTSC Phospholipase A2 OS=Notechis scutatus scuta... 29 8.4
>sp|Q9PUH5|PA29_AUSSU Phospholipase A2 isozyme S11-61 OS=Austrelaps
superbus PE=2 SV=1
Length = 145
Score = 31.2 bits (69), Expect = 1.7
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +1
Query: 82 LRHCCATSDKCY***KAVRCACYHPLTLNSWR 177
L CC T D CY +A + CY LTL SW+
Sbjct: 68 LDRCCKTHDDCY--TEAGKKGCYPKLTLYSWK 97
>sp|Q9PUH6|PA28_AUSSU Phospholipase A2 isozyme S10-58F OS=Austrelaps
superbus PE=2 SV=1
Length = 145
Score = 31.2 bits (69), Expect = 1.7
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +1
Query: 82 LRHCCATSDKCY***KAVRCACYHPLTLNSWR 177
L CC T D CY +A + CY LTL SW+
Sbjct: 68 LDRCCKTHDDCY--TEAGKKGCYPKLTLYSWK 97
>sp|Q9PUH7|PA27_AUSSU Phospholipase A2 isozyme S15-109 OS=Austrelaps
superbus PE=2 SV=1
Length = 144
Score = 31.2 bits (69), Expect = 1.7
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +1
Query: 82 LRHCCATSDKCY***KAVRCACYHPLTLNSWR 177
L CC T D CY +A + CY LTL SW+
Sbjct: 68 LDRCCKTHDDCY--TEAGKKGCYPKLTLYSWK 97
>sp|P20250|PA2G_PSEAU Phospholipase A2 isozyme PA-1G OS=Pseudechis
australis PE=1 SV=1
Length = 117
Score = 30.8 bits (68), Expect = 2.2
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = +1
Query: 82 LRHCCATSDKCY***KAVRCACYHPLTLNSW 174
L CC T D CY +A + CY LTL SW
Sbjct: 41 LDRCCQTHDDCY--GEAEKKGCYPKLTLYSW 69
>sp|P20256|PA2C_PSEAU Phospholipase A2 isozyme PA-12C OS=Pseudechis
australis PE=1 SV=1
Length = 118
Score = 30.0 bits (66), Expect = 3.8
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 82 LRHCCATSDKCY***KAVRCACYHPLTLNSWR 177
L CC T D CY +A + C+ LTL SW+
Sbjct: 41 LDRCCQTHDNCY--EQAGKKGCFPKLTLYSWK 70
>sp|P20258|PA2A_PSEPO Phospholipase A2 OS=Pseudechis porphyriacus
PE=1 SV=1
Length = 117
Score = 30.0 bits (66), Expect = 3.8
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +1
Query: 82 LRHCCATSDKCY***KAVRCACYHPLTLNSWR 177
L CC T D CY +A + C+ LTL SW+
Sbjct: 41 LDRCCQTHDNCY--DQAGKKGCFPKLTLYSWK 70
>sp|P20253|PA29_PSEAU Phospholipase A2 isozyme PA-9C OS=Pseudechis
australis PE=1 SV=1
Length = 118
Score = 30.0 bits (66), Expect = 3.8
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 82 LRHCCATSDKCY***KAVRCACYHPLTLNSWR 177
L CC D+CY +AV+ C+ LT+ SW+
Sbjct: 41 LDRCCKVHDECYG--EAVKQGCFPKLTVYSWK 70
>sp|P20251|PA23_PSEAU Phospholipase A2 isozyme PA-3 OS=Pseudechis
australis PE=1 SV=1
Length = 118
Score = 28.9 bits (63), Expect = 8.4
Identities = 14/31 (45%), Positives = 16/31 (51%)
Frame = +1
Query: 82 LRHCCATSDKCY***KAVRCACYHPLTLNSW 174
L CC D CY +A + CY LTL SW
Sbjct: 41 LDRCCKVHDDCYG--EAEKKGCYPKLTLYSW 69
>sp|P08873|PA20_NOTSC Phospholipase A2 OS=Notechis scutatus scutatus
PE=1 SV=1
Length = 145
Score = 28.9 bits (63), Expect = 8.4
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = +1
Query: 82 LRHCCATSDKCY***KAVRCACYHPLTLNSWR 177
L CC D CY +A + CY LTL SW+
Sbjct: 68 LDRCCKAHDDCYG--EAGKKGCYPTLTLYSWQ 97
|
|
|
Link to BlastX Result : TrEMBL |
|
|
- |
|
|
- |
|
|
- |
|
|
- |
|
|
|
|
|
- |
|
|
- |
|
|
Pp1s14_246V6.1 |
|
|
- |
|
|
DK943507
|
399
|
hypothetical protein
|
sporophyte
|
CL795Contig1
|
-
|
-
|
-
|
412537
|
|
|
DK943507
|
|
|
YMU02A01NGRL0003_A20 |
|
|
YMU02 |
|
|
399 |
|
|
hypothetical protein |
|
|
DK943507 |
|
|
young leaves |
|
|
CL795Contig1 |
|
|
GCAAGGGTTAGATGATGAGTATGTGAGTTTGAAGAAGAAGGTCACAATGAATAAGGAGCT
AGTAGGGAGGGAAGGGGTGAGGGAATATTTGGATGTATTGGGATATGTGATGAGTGGGTT
CCTAGAGTGGGCTTATCAAACAGGGAGATACCATGGCCTTAACAATCACCTTAGTCTTAG
AAGTGGCCTTGTGAGCCTAGTCCACCTTGATCTCACCCTAATCACCCAAGGAGTGGTCAA
ATCCGAACTATTTGCAGATAATTAAGTCATAGCTTATGCACCTTCTTCGAAGCTCTACCC
ACATAATTAGCCTCTTCTTCACCATACTGTGTACTTTCTTGTTAAGTAAACTTTGCCTTT
TTATAACCGCNNAAAAAAAAAAAAAAAAAAAAAAAAAAA |
|
|
- |
|
|
Link to BlastX Result : Swiss-Prot |
|
|
sp|Q0BV26|MURC_GRABC UDP-N-acetylmuramate--L-alanine ligase OS=Granulibacter bethesdensis (strain ATCC BAA-1260 / CGDNIH1) |
|
|
41 |
|
|
29.3 |
|
|
6.4 |
|
|
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK943507|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_A20, 5'
(372 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q0BV26|MURC_GRABC UDP-N-acetylmuramate--L-alanine ligase OS=G... 29 6.4
sp|A9H0J3|MURC_GLUDA UDP-N-acetylmuramate--L-alanine ligase OS=G... 29 6.4
>sp|Q0BV26|MURC_GRABC UDP-N-acetylmuramate--L-alanine ligase
OS=Granulibacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1) GN=murC PE=3 SV=1
Length = 481
Score = 29.3 bits (64), Expect = 6.4
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 122 LEWAYQTGRYHGLNNHLSLRSGLVSLVHLDLTLITQGVVKS 244
L+WA G HG SL + ++ LD T+I G++ +
Sbjct: 107 LKWAVAVGGTHGKTTTTSLIAAVLEAAQLDPTVINGGIINA 147
>sp|A9H0J3|MURC_GLUDA UDP-N-acetylmuramate--L-alanine ligase
OS=Gluconacetobacter diazotrophicus (strain ATCC 49037 /
DSM 5601 / PAl5) GN=murC PE=3 SV=1
Length = 480
Score = 29.3 bits (64), Expect = 6.4
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +2
Query: 122 LEWAYQTGRYHGLNNHLSLRSGLVSLVHLDLTLITQGVVKS 244
L WA G HG SL + ++ LD T+I G++++
Sbjct: 107 LRWAVAVGGTHGKTTTTSLIAAVLEAARLDPTVINGGIIEA 147
|
|
|
Link to BlastX Result : TrEMBL |
|
|
tr|B5H135|B5H135_STRCL Putative uncharacterized protein OS=Streptomyces clavuligerus ATCC 27064 |
|
|
56 |
|
|
39.3 |
|
|
0.099 |
|
|
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK943507|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_A20, 5'
(372 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|B5H135|B5H135_STRCL Putative uncharacterized protein OS=Strep... 39 0.099
tr|A8NU13|A8NU13_COPC7 Predicted protein OS=Coprinopsis cinerea ... 35 1.4
tr|A9FZ87|A9FZ87_SORC5 Putative terpene cyclase OS=Sorangium cel... 35 1.9
tr|A6G4H7|A6G4H7_9DELT Terpene synthase, metal-binding protein O... 33 9.2
>tr|B5H135|B5H135_STRCL Putative uncharacterized protein
OS=Streptomyces clavuligerus ATCC 27064 GN=SSCG_05309
PE=4 SV=1
Length = 459
Score = 39.3 bits (90), Expect = 0.099
Identities = 21/56 (37%), Positives = 29/56 (51%)
Frame = +2
Query: 59 LVGREGVREYLDVLGYVMSGFLEWAYQTGRYHGLNNHLSLRSGLVSLVHLDLTLIT 226
L R GVREYLD L V+ G + W+ + RYHG + + +H D T+ T
Sbjct: 402 LGARPGVREYLDALELVLPGNIVWSRTSRRYHGTGCPWTGTARTAMALHPDRTVFT 457
>tr|A8NU13|A8NU13_COPC7 Predicted protein OS=Coprinopsis cinerea
(strain Okayama-7 / 130 / FGSC 9003) GN=CC1G_06441 PE=4
SV=1
Length = 345
Score = 35.4 bits (80), Expect = 1.4
Identities = 23/81 (28%), Positives = 43/81 (53%)
Frame = +2
Query: 17 EYVSLKKKVTMNKELVGREGVREYLDVLGYVMSGFLEWAYQTGRYHGLNNHLSLRSGLVS 196
+Y+ K ++ + +L +E VR Y++ LGY M G L W++++ RY G + R
Sbjct: 269 DYLEAKSQLLQSTDLP-QEAVR-YIEALGYWMVGNLVWSFESQRYFGAQHE---RVKATH 323
Query: 197 LVHLDLTLITQGVVKSELFAD 259
+VHL + + + S+ +D
Sbjct: 324 VVHLRPSSVLEASCDSDSDSD 344
>tr|A9FZ87|A9FZ87_SORC5 Putative terpene cyclase OS=Sorangium
cellulosum (strain So ce56) GN=geoA PE=4 SV=1
Length = 329
Score = 35.0 bits (79), Expect = 1.9
Identities = 21/57 (36%), Positives = 33/57 (57%)
Frame = +2
Query: 17 EYVSLKKKVTMNKELVGREGVREYLDVLGYVMSGFLEWAYQTGRYHGLNNHLSLRSG 187
EY +K+KV L + +R YLD + +++G WA + GRY GL + L +R+G
Sbjct: 277 EYQGVKEKVLA---LWADDEIRLYLDAVEAMIAGNQRWALEAGRYSGLES-LIVRAG 329
>tr|A6G4H7|A6G4H7_9DELT Terpene synthase, metal-binding protein
OS=Plesiocystis pacifica SIR-1 GN=PPSIR1_04093 PE=4 SV=1
Length = 355
Score = 32.7 bits (73), Expect = 9.2
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +2
Query: 71 EGVREYLDVLGYVMSGFLEWAYQTGRYHGLN 163
E V+ ++DVL + G L+WA +TGRY L+
Sbjct: 301 EDVQRFVDVLRSWIRGHLDWAQETGRYRPLD 331
|
|
|
- |
|
|
- |
|
|
- |
|
|
412537 |
|
|
DK943508
|
562
|
hypothetical protein
|
sporophyte
|
CL8Contig1
|
-
|
-
|
Pp1s25_348V6.1
|
92402
|
|
|
DK943508
|
|
|
YMU02A01NGRL0003_A21 |
|
|
YMU02 |
|
|
562 |
|
|
hypothetical protein |
|
|
DK943508 |
|
|
young leaves |
|
|
CL8Contig1 |
|
|
TAATACAGACGGAGGTTCGAATCCTCGCAAGGCGTCCGGAACAAAAGTCGTCTTGCATTT
CCGGAATAAGTCTCCCGACCCCTTGCTTTCCACCAAGAGAAAGCAAAAAGAACCCGGGCG
GGAAAGTTTGATTTGGTCAATCTCCTTGCCCCTCCGAACTAAGTGGCGACGAAACCGTTC
TTCGTATCGAGATGCGGGTGGGTCCTGTTGCTTCGGTGTCCCCCGAAGCTAAATCTATCA
AAAGAAAAGGAAATCCTTGGGAAATTTAATATTCCCTAGTACCAATCCGTAAAAATGGAA
TGTAAATCCTGGGATTGTTGACTACTAAGAGTCTCTCTTATCATTCTATGGAGTTTCCAT
AGATAGGTAAGGTCGTAAGTCCCACCTTTTCTATTTTCCCCTCTCCAAACCAAGGGTGGG
GCGGCAAAGAAGATATTGGGTCTCGCCCCAATGCGGTACTCAAAGAATAGTCTTACGGGA
TAGAGAAGAAGGAGGGGTAGGAAGTGGCGGCTTAGACTGATACACGGACGTGATTCGTCT
CTCAAAAAAAAAAAAAAAAAAA |
|
|
- |
|
|
Link to BlastX Result : Swiss-Prot |
|
|
sp|Q6NRW0|MTBP_XENLA Mdm2-binding protein OS=Xenopus laevis |
|
|
61 |
|
|
31.6 |
|
|
2.6 |
|
|
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK943508|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_A21, 5'
(543 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q6NRW0|MTBP_XENLA Mdm2-binding protein OS=Xenopus laevis GN=m... 32 2.6
sp|Q0P4G8|MTBP_XENTR Mdm2-binding protein OS=Xenopus tropicalis ... 31 3.4
sp|Q9ASY9|PM36_ARATH Seed maturation protein PM36 homolog OS=Ara... 30 7.6
sp|Q6C8W4|PLPL_YARLI Patatin-like phospholipase domain-containin... 30 7.6
sp|Q60435|UBIM_CRIGR Ubiquitin-like protein FUBI OS=Cricetulus g... 30 9.9
sp|Q5B630|PABP_EMENI Polyadenylate-binding protein, cytoplasmic ... 30 9.9
sp|Q7TQN7|GP135_RAT Probable G-protein coupled receptor 135 OS=R... 30 9.9
sp|O05528|FLII_CAUCR Flagellum-specific ATP synthase OS=Caulobac... 30 9.9
sp|A8G5V0|COBQ_PROM2 Cobyric acid synthase OS=Prochlorococcus ma... 30 9.9
sp|Q6PJG2|CN043_HUMAN Uncharacterized protein C14orf43 OS=Homo s... 30 9.9
>sp|Q6NRW0|MTBP_XENLA Mdm2-binding protein OS=Xenopus laevis GN=mtbp
PE=2 SV=1
Length = 860
Score = 31.6 bits (70), Expect = 2.6
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Frame = -1
Query: 204 DPPA-SRYEERFRRHLVRRGKEIDQIKLSRPGSFC--FLLVESKGSGDLFRKCKTTFVPD 34
+PPA R +++R ++ R+ K+I + G +C + L++ KGSG CK T +
Sbjct: 335 NPPALQRSSKKWREYMSRKPKDIKVPGVELKGEYCSYYFLIQGKGSG----LCKATLLHS 390
Query: 33 A 31
A
Sbjct: 391 A 391
>sp|Q0P4G8|MTBP_XENTR Mdm2-binding protein OS=Xenopus tropicalis
GN=mtbp PE=2 SV=2
Length = 867
Score = 31.2 bits (69), Expect = 3.4
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 3/61 (4%)
Frame = -1
Query: 204 DPPA-SRYEERFRRHLVRRGKEIDQIKLSRPGSFC--FLLVESKGSGDLFRKCKTTFVPD 34
+PPA R +++R ++ R+ K+I + G +C + L++ KGSG CK T +
Sbjct: 339 NPPALQRSSKKWREYMSRKPKDIKVPGVELKGEYCSYYFLIQGKGSG----FCKATLLHS 394
Query: 33 A 31
A
Sbjct: 395 A 395
>sp|Q9ASY9|PM36_ARATH Seed maturation protein PM36 homolog
OS=Arabidopsis thaliana GN=At3g16990 PE=1 SV=2
Length = 221
Score = 30.0 bits (66), Expect = 7.6
Identities = 14/38 (36%), Positives = 27/38 (71%), Gaps = 1/38 (2%)
Frame = +3
Query: 186 IEMRVGPVASVSPEAKSIKRKGNPWEI*YS-LVPIRKN 296
+E+ +G +AS++ E + KR+G+ W++ +S +VP R N
Sbjct: 75 MEVVLGGIASLNDEIEWFKREGSKWDVDFSTVVPQRAN 112
>sp|Q6C8W4|PLPL_YARLI Patatin-like phospholipase domain-containing
protein YALI0D16379g OS=Yarrowia lipolytica
GN=YALI0D16379g PE=3 SV=1
Length = 818
Score = 30.0 bits (66), Expect = 7.6
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = -2
Query: 407 WRGENRKGGTYDLTYLWKLHRMIRETLSSQQSQDLHSI 294
WR EN K G YD + KL +M+R+ Q++DL +I
Sbjct: 292 WR-ENPKFGYYDHVTISKLTKMVRKLRLQDQAEDLSNI 328
>sp|Q60435|UBIM_CRIGR Ubiquitin-like protein FUBI OS=Cricetulus
griseus GN=FAU PE=3 SV=2
Length = 74
Score = 29.6 bits (65), Expect = 9.9
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 156 ELSGDETVLRIEMRVGPVASVSPEAKSIKRKGNPWE 263
E++G ETV +I+ V + +SPE + + G+P E
Sbjct: 14 EVTGQETVAQIKAHVASLEGISPEDQVVLLAGSPLE 49
>sp|Q5B630|PABP_EMENI Polyadenylate-binding protein, cytoplasmic and
nuclear OS=Emericella nidulans GN=pab1 PE=2 SV=2
Length = 732
Score = 29.6 bits (65), Expect = 9.9
Identities = 19/49 (38%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Frame = -3
Query: 166 PLSSEGQGD*PNQTFPPGFFLLSLGGKQGV----GRLIPEMQDDFCSGR 32
P G+G PNQ PP F L +G QG G P +Q F GR
Sbjct: 533 PGQQGGRGVGPNQQIPPNFQGLPMGAMQGPGIPNGMGYPMVQGQFGGGR 581
>sp|Q7TQN7|GP135_RAT Probable G-protein coupled receptor 135
OS=Rattus norvegicus GN=Gpr135 PE=2 SV=1
Length = 457
Score = 29.6 bits (65), Expect = 9.9
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 9/48 (18%)
Frame = +2
Query: 17 SNPRKASGTKVV---------LHFRNKSPDPLLSTKRKQKEPGRESLI 133
SNP SG +VV L FR PDP+++ ++ K R+S I
Sbjct: 410 SNPASGSGGEVVMWARKNPVVLFFREDPPDPVMAVYKQHKSETRDSSI 457
>sp|O05528|FLII_CAUCR Flagellum-specific ATP synthase OS=Caulobacter
crescentus GN=fliI PE=3 SV=2
Length = 444
Score = 29.6 bits (65), Expect = 9.9
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +3
Query: 132 FGQSPCPSELSGDETVLRIEMRVGPVASVSPEAK 233
FGQ P P+E+ G + M GPV V P A+
Sbjct: 48 FGQKPLPAEVVGFRETRALLMPFGPVEGVGPGAE 81
>sp|A8G5V0|COBQ_PROM2 Cobyric acid synthase OS=Prochlorococcus
marinus (strain MIT 9215) GN=cobQ PE=3 SV=2
Length = 509
Score = 29.6 bits (65), Expect = 9.9
Identities = 27/84 (32%), Positives = 36/84 (42%)
Frame = -2
Query: 437 NIFFAAPPLVWRGENRKGGTYDLTYLWKLHRMIRETLSSQQSQDLHSIFTDWY*GILNFP 258
N F L W EN KGGT TY +H + S + Q ++ I ILN
Sbjct: 425 NPIFEDLDLGWFKENNKGGTIAGTY---IHGIFEN--DSWREQYINLIRKSKNLPILNKK 479
Query: 257 RISFSFDRFSFGGHRSNRTHPHLD 186
IS+ R S + +N H HL+
Sbjct: 480 SISYKKKRESIIDNLANEFHKHLN 503
>sp|Q6PJG2|CN043_HUMAN Uncharacterized protein C14orf43 OS=Homo
sapiens GN=C14orf43 PE=1 SV=2
Length = 1045
Score = 29.6 bits (65), Expect = 9.9
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +2
Query: 11 GGSNPRK---ASGTKVVLHFRNKSPDPLLSTKRKQKEPGRESLIWSISLPLRT 160
G RK AS TK + F +P L+TKR +++ G LI +S+P+RT
Sbjct: 487 GSEEKRKSVLASTTKCGVEFS----EPSLATKRAREDSGMVPLIIPVSVPVRT 535
|
|
|
Link to BlastX Result : TrEMBL |
|
|
tr|Q7UIE7|Q7UIE7_RHOBA Putative uncharacterized protein OS=Rhodopirellula baltica |
|
|
41 |
|
|
35.4 |
|
|
2.0 |
|
|
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK943508|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_A21, 5'
(543 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|Q7UIE7|Q7UIE7_RHOBA Putative uncharacterized protein OS=Rhodo... 35 2.0
tr|A1CQJ5|A1CQJ5_ASPCL Putative uncharacterized protein OS=Asper... 35 2.0
tr|B6KNM5|B6KNM5_TOXGO Putative uncharacterized protein OS=Toxop... 35 3.3
tr|B6KD79|B6KD79_TOXGO Putative uncharacterized protein OS=Toxop... 35 3.3
tr|A7UWX4|A7UWX4_NEUCR Predicted protein OS=Neurospora crassa GN... 34 5.7
tr|Q851X6|Q851X6_ORYSJ Putative uncharacterized protein OSJNBa00... 33 9.7
tr|Q10AH3|Q10AH3_ORYSJ Os03g0852300 protein OS=Oryza sativa subs... 33 9.7
tr|A3APU5|A3APU5_ORYSJ Putative uncharacterized protein OS=Oryza... 33 9.7
>tr|Q7UIE7|Q7UIE7_RHOBA Putative uncharacterized protein
OS=Rhodopirellula baltica GN=RB12581 PE=4 SV=1
Length = 174
Score = 35.4 bits (80), Expect = 2.0
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +2
Query: 53 LHFRNKSPDPLLSTKRKQKEPGRESLIWSISLPLRTKWRRN 175
L RN+SP+PLL T + K R + W+ +R WR +
Sbjct: 133 LDARNRSPNPLLKTSWRMKANSRSRITWTPKTKIRDGWRNS 173
>tr|A1CQJ5|A1CQJ5_ASPCL Putative uncharacterized protein
OS=Aspergillus clavatus GN=ACLA_026330 PE=4 SV=1
Length = 577
Score = 35.4 bits (80), Expect = 2.0
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Frame = -2
Query: 449 GARPNIFFAAPPLVWRGENRKGGTYDLTYLWKLHRMIRETLSSQQSQDLHSIFTDWY*GI 270
G+RP + FA P+ +G N G Y L Y W+L + + + D+ I+ W G+
Sbjct: 168 GSRPQLLFAVLPIADKGANFSGKHYVLCYDWRLRTFLARSFNWLPG-DIRDIWAVWSEGL 226
Query: 269 ----LNFPRI 252
+ PR+
Sbjct: 227 TVYTITIPRL 236
>tr|B6KNM5|B6KNM5_TOXGO Putative uncharacterized protein
OS=Toxoplasma gondii ME49 GN=TGME49_053930 PE=4 SV=1
Length = 1857
Score = 34.7 bits (78), Expect = 3.3
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +3
Query: 54 CISGISLPTPCFPPRESKKNPGGKV*FGQSPCP 152
C+ G S PTPC P + PGG+ G SPCP
Sbjct: 52 CLEGASEPTPC-PAGTFRDQPGGEALDGCSPCP 83
>tr|B6KD79|B6KD79_TOXGO Putative uncharacterized protein
OS=Toxoplasma gondii ME49 GN=TGME49_071360 PE=4 SV=1
Length = 464
Score = 34.7 bits (78), Expect = 3.3
Identities = 22/69 (31%), Positives = 33/69 (47%)
Frame = +3
Query: 39 EQKSSCISGISLPTPCFPPRESKKNPGGKV*FGQSPCPSELSGDETVLRIEMRVGPVASV 218
E + C+S + P+ P SK GG G+ C + + ET R R P+AS+
Sbjct: 46 ELQKQCLSSSAAPSFSSPFSSSKPASGGSKRSGRRRCGAGAA--ETAERPSARAAPLASL 103
Query: 219 SPEAKSIKR 245
SP A ++ R
Sbjct: 104 SPAASALSR 112
>tr|A7UWX4|A7UWX4_NEUCR Predicted protein OS=Neurospora crassa
GN=NCU10326 PE=4 SV=1
Length = 71
Score = 33.9 bits (76), Expect = 5.7
Identities = 13/33 (39%), Positives = 24/33 (72%)
Frame = +3
Query: 102 SKKNPGGKV*FGQSPCPSELSGDETVLRIEMRV 200
S++ GG+V + SPCPSEL+ +++R++ R+
Sbjct: 6 SRQREGGRVTYTTSPCPSELTQRHSLVRVKRRI 38
>tr|Q851X6|Q851X6_ORYSJ Putative uncharacterized protein
OSJNBa0015N08.25 OS=Oryza sativa subsp. japonica
GN=OSJNBa0015N08.25 PE=4 SV=1
Length = 289
Score = 33.1 bits (74), Expect = 9.7
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 6/67 (8%)
Frame = +2
Query: 23 PRKASGTKVVLHFR----NKSPDPLLSTKRKQ--KEPGRESLIWSISLPLRTKWRRNRSS 184
PRK G K R + P P K+K+ KEP RE S P+ T ++N+ +
Sbjct: 89 PRKHKGAKSEKPHRVSGEGEKPTPTKKKKKKESSKEPKREKQ--QASAPMSTPSKKNKEA 146
Query: 185 YRDAGGS 205
RD GG+
Sbjct: 147 KRDTGGA 153
>tr|Q10AH3|Q10AH3_ORYSJ Os03g0852300 protein OS=Oryza sativa subsp.
japonica GN=Os03g0852300 PE=2 SV=1
Length = 303
Score = 33.1 bits (74), Expect = 9.7
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 6/67 (8%)
Frame = +2
Query: 23 PRKASGTKVVLHFR----NKSPDPLLSTKRKQ--KEPGRESLIWSISLPLRTKWRRNRSS 184
PRK G K R + P P K+K+ KEP RE S P+ T ++N+ +
Sbjct: 89 PRKHKGAKSEKPHRVSGEGEKPTPTKKKKKKESSKEPKREKQ--QASAPMSTPSKKNKEA 146
Query: 185 YRDAGGS 205
RD GG+
Sbjct: 147 KRDTGGA 153
>tr|A3APU5|A3APU5_ORYSJ Putative uncharacterized protein OS=Oryza
sativa subsp. japonica GN=OsJ_012817 PE=4 SV=1
Length = 227
Score = 33.1 bits (74), Expect = 9.7
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 6/67 (8%)
Frame = +2
Query: 23 PRKASGTKVVLHFR----NKSPDPLLSTKRKQ--KEPGRESLIWSISLPLRTKWRRNRSS 184
PRK G K R + P P K+K+ KEP RE S P+ T ++N+ +
Sbjct: 89 PRKHKGAKSEKPHRVSGEGEKPTPTKKKKKKESSKEPKREKQ--QASAPMSTPSKKNKEA 146
Query: 185 YRDAGGS 205
RD GG+
Sbjct: 147 KRDTGGA 153
|
|
|
- |
|
|
- |
|
|
Pp1s25_348V6.1 |
|
|
92402 |
|
|
DK943509
|
571
|
putative 40S ribosomal protein S2
|
sporophyte
|
CL219Contig1
|
K02981
|
AT3G57490.1
|
Pp1s400_15V6.1
|
67484
|
|
|
DK943509
|
|
|
YMU02A01NGRL0003_A22 |
|
|
YMU02 |
|
|
571 |
|
|
putative 40S ribosomal protein S2 |
|
|
DK943509 |
|
|
young leaves |
|
|
CL219Contig1 |
|
|
AAGATCATGCCCGTTCAGAAGCAGACTCGCGCAGGGCAGCGCACCCGTTTCAAGGCCTTT
GTTGTTGTAGGCGACAACAATGGCCATGTGGGCTTGGGCGTCAAGTGCAGCAAGGAGGTC
GCCACCGCTATCCGTGGTGCCATTATCTTGGCCAAGCTCTCTGTTATACCTGTGCGTAGA
GGGTATTGGGGTAACAAGATCGGTAAGCCTCACACAGTCCCATGCAAGGTCACTGGCAAA
TGTGGTTCTGTCACTGTCGGGCTTGTTCCTGCTCCAAGAGGTTCTGGAATTGTGGCTGCC
CGTGTGCCTAAGAAGGTTTTGCAGTTTGCTGGTATTGACGATGTATTCACAGCTTCTCGT
GGCTCCACAAAGACTCTTGGAAACTTTGTTAAGGCAACTTTTGATTGTCTGTTGAAGACT
TACGGCTTTTTGACTCCGGATCTGTGGCGAGAGACTAGATTTGTGAAGTCTCCTTTCCAG
GAGTTCACTGACCACCTTGCAAAGCCAACAAGGTTGAGCATTTTGGATGAGGTTGACAAG
CCTCCTGCCTATTGAGCTTGTCATTGTCTAT |
|
|
- |
|
|
Link to BlastX Result : Swiss-Prot |
|
|
sp|Q9SCM3|RS24_ARATH 40S ribosomal protein S2-4 OS=Arabidopsis thaliana |
|
|
178 |
|
|
317.0 |
|
|
0.0 |
|
|
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK943509|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_A22, 5'
(571 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9SCM3|RS24_ARATH 40S ribosomal protein S2-4 OS=Arabidopsis t... 317 2e-86
sp|P49688|RS23_ARATH 40S ribosomal protein S2-3 OS=Arabidopsis t... 315 8e-86
sp|Q93VB8|RS22_ARATH 40S ribosomal protein S2-2 OS=Arabidopsis t... 314 2e-85
sp|Q8L8Y0|RS21_ARATH 40S ribosomal protein S2-1 OS=Arabidopsis t... 314 2e-85
sp|Q90YS3|RS2_ICTPU 40S ribosomal protein S2 OS=Ictalurus puncta... 293 3e-79
sp|P27952|RS2_RAT 40S ribosomal protein S2 OS=Rattus norvegicus ... 291 1e-78
sp|P25444|RS2_MOUSE 40S ribosomal protein S2 OS=Mus musculus GN=... 291 1e-78
sp|P15880|RS2_HUMAN 40S ribosomal protein S2 OS=Homo sapiens GN=... 291 1e-78
sp|O18789|RS2_BOVIN 40S ribosomal protein S2 OS=Bos taurus GN=RP... 291 1e-78
sp|P49154|RS2_URECA 40S ribosomal protein S2 OS=Urechis caupo GN... 284 2e-76
sp|P31009|RS2_DROME 40S ribosomal protein S2 OS=Drosophila melan... 278 1e-74
sp|P27685|RS2_DICDI 40S ribosomal protein S2 OS=Dictyostelium di... 273 4e-73
sp|P46791|RS2_CRIGR 40S ribosomal protein S2 (Fragment) OS=Crice... 265 9e-71
sp|P51403|RS2_CAEEL 40S ribosomal protein S2 OS=Caenorhabditis e... 256 4e-68
sp|O74892|RS2_SCHPO 40S ribosomal protein S2 OS=Schizosaccharomy... 248 2e-65
sp|O43992|RS2_LEIAM 40S ribosomal protein S2 OS=Leishmania amazo... 235 1e-61
sp|P25443|RS2_YEAST 40S ribosomal protein S2 OS=Saccharomyces ce... 221 3e-57
sp|A8AC00|RS5_IGNH4 30S ribosomal protein S5P OS=Ignicoccus hosp... 139 8e-33
sp|Q9YF95|RS5_AERPE 30S ribosomal protein S5P OS=Aeropyrum perni... 139 8e-33
sp|A2BMD9|RS5_HYPBU 30S ribosomal protein S5P OS=Hyperthermus bu... 139 1e-32
sp|A1RWR6|RS5_THEPD 30S ribosomal protein S5P OS=Thermofilum pen... 138 2e-32
sp|Q8TZA6|RS5_METKA 30S ribosomal protein S5P OS=Methanopyrus ka... 135 2e-31
sp|Q9UX87|RS5_SULSO 30S ribosomal protein S5P OS=Sulfolobus solf... 134 2e-31
sp|A4YCY6|RS5_METS5 30S ribosomal protein S5P OS=Metallosphaera ... 133 5e-31
sp|A3DNC7|RS5_STAMF 30S ribosomal protein S5P OS=Staphylothermus... 132 1e-30
sp|A3MU88|RS5_PYRCJ 30S ribosomal protein S5P OS=Pyrobaculum cal... 132 1e-30
sp|A6UQ64|RS5_METVS 30S ribosomal protein S5P OS=Methanococcus v... 131 3e-30
sp|P14036|RS5_METVA 30S ribosomal protein S5P OS=Methanococcus v... 131 3e-30
sp|A4WHQ8|RS5_PYRAR 30S ribosomal protein S5P OS=Pyrobaculum ars... 130 4e-30
sp|Q8PV30|RS5_METMA 30S ribosomal protein S5P OS=Methanosarcina ... 130 4e-30
>sp|Q9SCM3|RS24_ARATH 40S ribosomal protein S2-4 OS=Arabidopsis
thaliana GN=RPS2D PE=2 SV=1
Length = 276
Score = 317 bits (813), Expect = 2e-86
Identities = 154/178 (86%), Positives = 165/178 (92%)
Frame = +1
Query: 1 KIMPVQKQTRAGQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR 180
KIMPVQKQTRAGQRTRFKAF+VVGD+NGHVGLGVKCSKEVATAIRGAIILAKLSV+P+RR
Sbjct: 93 KIMPVQKQTRAGQRTRFKAFIVVGDSNGHVGLGVKCSKEVATAIRGAIILAKLSVVPIRR 152
Query: 181 GYWGNKIGKPHTVPCKVTGKCGSVTVGLVPAPRGSGIVAARVPKKVLQFAGIDDVFTASR 360
GYWGNKIGKPHTVPCKVTGKCGSVTV +VPAPRGSGIVAARVPKKVLQFAGIDDVFT+SR
Sbjct: 153 GYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSR 212
Query: 361 GSTKTLGNFVKATFDCLLKTYGFLTPDLWRETRFVKSPFQEFTDHLAKPTRLSILDEV 534
GSTKTLGNFVKATFDCL KTYGFLTP+ W+ETRF KSP+QE TD L P + I + V
Sbjct: 213 GSTKTLGNFVKATFDCLQKTYGFLTPEFWKETRFSKSPYQEHTDFLLIPPGVKISEVV 270
>sp|P49688|RS23_ARATH 40S ribosomal protein S2-3 OS=Arabidopsis
thaliana GN=RPS2C PE=2 SV=2
Length = 285
Score = 315 bits (808), Expect = 8e-86
Identities = 153/167 (91%), Positives = 160/167 (95%)
Frame = +1
Query: 1 KIMPVQKQTRAGQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR 180
KIMPVQKQTRAGQRTRFKAFVVVGD NGHVGLGVKCSKEVATAIRGAIILAKLSV+PVRR
Sbjct: 102 KIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRR 161
Query: 181 GYWGNKIGKPHTVPCKVTGKCGSVTVGLVPAPRGSGIVAARVPKKVLQFAGIDDVFTASR 360
GYWGNKIGKPHTVPCKVTGKCGSVTV +VPAPRGSGIVAARVPKKVLQFAGIDDVFT+SR
Sbjct: 162 GYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSR 221
Query: 361 GSTKTLGNFVKATFDCLLKTYGFLTPDLWRETRFVKSPFQEFTDHLA 501
GSTKTLGNFVKATFDCL KTYGFLTP+ W+ETRF +SP+QE TD LA
Sbjct: 222 GSTKTLGNFVKATFDCLQKTYGFLTPEFWKETRFSRSPYQEHTDFLA 268
>sp|Q93VB8|RS22_ARATH 40S ribosomal protein S2-2 OS=Arabidopsis
thaliana GN=RPS2B PE=2 SV=1
Length = 284
Score = 314 bits (805), Expect = 2e-85
Identities = 152/167 (91%), Positives = 160/167 (95%)
Frame = +1
Query: 1 KIMPVQKQTRAGQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR 180
KIMPVQKQTRAGQRTRFKAFVVVGD NGHVGLGVKCSKEVATAIRGAIILAKLSV+PVRR
Sbjct: 101 KIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRR 160
Query: 181 GYWGNKIGKPHTVPCKVTGKCGSVTVGLVPAPRGSGIVAARVPKKVLQFAGIDDVFTASR 360
GYWGNKIGKPHTVPCKVTGKCGSVTV +VPAPRGSGIVAARVPKKVLQFAGIDDVFT+SR
Sbjct: 161 GYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSR 220
Query: 361 GSTKTLGNFVKATFDCLLKTYGFLTPDLWRETRFVKSPFQEFTDHLA 501
GSTKTLGNFVKATFDCL KTYGFLTP+ W+ETRF +SP+QE TD L+
Sbjct: 221 GSTKTLGNFVKATFDCLQKTYGFLTPEFWKETRFSRSPYQEHTDFLS 267
>sp|Q8L8Y0|RS21_ARATH 40S ribosomal protein S2-1 OS=Arabidopsis
thaliana GN=RPS2A PE=2 SV=2
Length = 284
Score = 314 bits (805), Expect = 2e-85
Identities = 152/167 (91%), Positives = 160/167 (95%)
Frame = +1
Query: 1 KIMPVQKQTRAGQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR 180
KIMPVQKQTRAGQRTRFKAFVVVGD NGHVGLGVKCSKEVATAIRGAIILAKLSV+PVRR
Sbjct: 101 KIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRR 160
Query: 181 GYWGNKIGKPHTVPCKVTGKCGSVTVGLVPAPRGSGIVAARVPKKVLQFAGIDDVFTASR 360
GYWGNKIGKPHTVPCKVTGKCGSVTV +VPAPRGSGIVAARVPKKVLQFAGIDDVFT+SR
Sbjct: 161 GYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSR 220
Query: 361 GSTKTLGNFVKATFDCLLKTYGFLTPDLWRETRFVKSPFQEFTDHLA 501
GSTKTLGNFVKATFDCL KTYGFLTP+ W+ETRF +SP+QE TD L+
Sbjct: 221 GSTKTLGNFVKATFDCLQKTYGFLTPEFWKETRFSRSPYQEHTDFLS 267
>sp|Q90YS3|RS2_ICTPU 40S ribosomal protein S2 OS=Ictalurus punctatus
GN=rps2 PE=2 SV=1
Length = 277
Score = 293 bits (751), Expect = 3e-79
Identities = 141/175 (80%), Positives = 157/175 (89%), Gaps = 1/175 (0%)
Frame = +1
Query: 1 KIMPVQKQTRAGQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR 180
KIMPVQKQTRAGQRTRFKAFV +GD NGHVGLGVKCSKEVATAIRGAIILAKLS+IPVRR
Sbjct: 93 KIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIIPVRR 152
Query: 181 GYWGNKIGKPHTVPCKVTGKCGSVTVGLVPAPRGSGIVAARVPKKVLQFAGIDDVFTASR 360
GYWGNKIGKPHTVPCKVTG+CGSV V L+PAPRG+GIV+A VPKK+L AGIDD +T++R
Sbjct: 153 GYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSAR 212
Query: 361 GSTKTLGNFVKATFDCLLKTYGFLTPDLWRETRFVKSPFQEFTDHLAKP-TRLSI 522
G T TLGNF KATFD + KTY +LTPDLW+ET F KSP+QEFTDHLAK TR+S+
Sbjct: 213 GCTATLGNFAKATFDAISKTYSYLTPDLWKETVFTKSPYQEFTDHLAKTHTRVSV 267
>sp|P27952|RS2_RAT 40S ribosomal protein S2 OS=Rattus norvegicus
GN=Rps2 PE=1 SV=1
Length = 293
Score = 291 bits (746), Expect = 1e-78
Identities = 139/175 (79%), Positives = 156/175 (89%), Gaps = 1/175 (0%)
Frame = +1
Query: 1 KIMPVQKQTRAGQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR 180
KIMPVQKQTRAGQRTRFKAFV +GD NGHVGLGVKCSKEVATAIRGAIILAKLS++PVRR
Sbjct: 108 KIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRR 167
Query: 181 GYWGNKIGKPHTVPCKVTGKCGSVTVGLVPAPRGSGIVAARVPKKVLQFAGIDDVFTASR 360
GYWGNKIGKPHTVPCKVTG+CGSV V L+PAPRG+GIV+A VPKK+L AGIDD +T++R
Sbjct: 168 GYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSAR 227
Query: 361 GSTKTLGNFVKATFDCLLKTYGFLTPDLWRETRFVKSPFQEFTDHLAKP-TRLSI 522
G T TLGNF KATFD + KTY +LTPDLW+ET F KSP+QEFTDHL K TR+S+
Sbjct: 228 GCTATLGNFAKATFDAISKTYSYLTPDLWKETVFTKSPYQEFTDHLVKTHTRVSV 282
>sp|P25444|RS2_MOUSE 40S ribosomal protein S2 OS=Mus musculus
GN=Rps2 PE=1 SV=3
Length = 293
Score = 291 bits (746), Expect = 1e-78
Identities = 139/175 (79%), Positives = 156/175 (89%), Gaps = 1/175 (0%)
Frame = +1
Query: 1 KIMPVQKQTRAGQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR 180
KIMPVQKQTRAGQRTRFKAFV +GD NGHVGLGVKCSKEVATAIRGAIILAKLS++PVRR
Sbjct: 108 KIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRR 167
Query: 181 GYWGNKIGKPHTVPCKVTGKCGSVTVGLVPAPRGSGIVAARVPKKVLQFAGIDDVFTASR 360
GYWGNKIGKPHTVPCKVTG+CGSV V L+PAPRG+GIV+A VPKK+L AGIDD +T++R
Sbjct: 168 GYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSAR 227
Query: 361 GSTKTLGNFVKATFDCLLKTYGFLTPDLWRETRFVKSPFQEFTDHLAKP-TRLSI 522
G T TLGNF KATFD + KTY +LTPDLW+ET F KSP+QEFTDHL K TR+S+
Sbjct: 228 GCTATLGNFAKATFDAISKTYSYLTPDLWKETVFTKSPYQEFTDHLVKTHTRVSV 282
>sp|P15880|RS2_HUMAN 40S ribosomal protein S2 OS=Homo sapiens
GN=RPS2 PE=1 SV=2
Length = 293
Score = 291 bits (746), Expect = 1e-78
Identities = 139/175 (79%), Positives = 156/175 (89%), Gaps = 1/175 (0%)
Frame = +1
Query: 1 KIMPVQKQTRAGQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR 180
KIMPVQKQTRAGQRTRFKAFV +GD NGHVGLGVKCSKEVATAIRGAIILAKLS++PVRR
Sbjct: 108 KIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRR 167
Query: 181 GYWGNKIGKPHTVPCKVTGKCGSVTVGLVPAPRGSGIVAARVPKKVLQFAGIDDVFTASR 360
GYWGNKIGKPHTVPCKVTG+CGSV V L+PAPRG+GIV+A VPKK+L AGIDD +T++R
Sbjct: 168 GYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSAR 227
Query: 361 GSTKTLGNFVKATFDCLLKTYGFLTPDLWRETRFVKSPFQEFTDHLAKP-TRLSI 522
G T TLGNF KATFD + KTY +LTPDLW+ET F KSP+QEFTDHL K TR+S+
Sbjct: 228 GCTATLGNFAKATFDAISKTYSYLTPDLWKETVFTKSPYQEFTDHLVKTHTRVSV 282
>sp|O18789|RS2_BOVIN 40S ribosomal protein S2 OS=Bos taurus GN=RPS2
PE=2 SV=2
Length = 293
Score = 291 bits (746), Expect = 1e-78
Identities = 139/175 (79%), Positives = 156/175 (89%), Gaps = 1/175 (0%)
Frame = +1
Query: 1 KIMPVQKQTRAGQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR 180
KIMPVQKQTRAGQRTRFKAFV +GD NGHVGLGVKCSKEVATAIRGAIILAKLS++PVRR
Sbjct: 108 KIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSIVPVRR 167
Query: 181 GYWGNKIGKPHTVPCKVTGKCGSVTVGLVPAPRGSGIVAARVPKKVLQFAGIDDVFTASR 360
GYWGNKIGKPHTVPCKVTG+CGSV V L+PAPRG+GIV+A VPKK+L AGIDD +T++R
Sbjct: 168 GYWGNKIGKPHTVPCKVTGRCGSVLVRLIPAPRGTGIVSAPVPKKLLMMAGIDDCYTSAR 227
Query: 361 GSTKTLGNFVKATFDCLLKTYGFLTPDLWRETRFVKSPFQEFTDHLAKP-TRLSI 522
G T TLGNF KATFD + KTY +LTPDLW+ET F KSP+QEFTDHL K TR+S+
Sbjct: 228 GCTATLGNFAKATFDAISKTYSYLTPDLWKETVFTKSPYQEFTDHLVKTHTRVSV 282
>sp|P49154|RS2_URECA 40S ribosomal protein S2 OS=Urechis caupo
GN=RPS2 PE=2 SV=1
Length = 278
Score = 284 bits (727), Expect = 2e-76
Identities = 135/168 (80%), Positives = 150/168 (89%)
Frame = +1
Query: 1 KIMPVQKQTRAGQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR 180
KIMPVQKQTRAGQRTRFKAFV +GD NGHVGLGVKCSKEVATAIRGAIILAKLSV+PVRR
Sbjct: 94 KIMPVQKQTRAGQRTRFKAFVAIGDYNGHVGLGVKCSKEVATAIRGAIILAKLSVVPVRR 153
Query: 181 GYWGNKIGKPHTVPCKVTGKCGSVTVGLVPAPRGSGIVAARVPKKVLQFAGIDDVFTASR 360
GYWGNKIGKPHTVPCKVTGKCGSV V L+PAPRG+GIV+A VPKK+L AGIDD +T++R
Sbjct: 154 GYWGNKIGKPHTVPCKVTGKCGSVLVRLIPAPRGTGIVSAPVPKKLLAMAGIDDCYTSAR 213
Query: 361 GSTKTLGNFVKATFDCLLKTYGFLTPDLWRETRFVKSPFQEFTDHLAK 504
G T TLGNF KAT+ + TY +LTPDLWRET F KSP+QE+TD+LAK
Sbjct: 214 GQTATLGNFAKATYAAIAATYSYLTPDLWRETVFTKSPYQEYTDYLAK 261
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Link to BlastX Result : TrEMBL |
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tr|A9U0C2|A9U0C2_PHYPA Predicted protein OS=Physcomitrella patens subsp. patens |
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184 |
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347.0 |
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0.0 |
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BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK943509|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_A22, 5'
(571 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|A9U0C2|A9U0C2_PHYPA Predicted protein OS=Physcomitrella paten... 347 4e-94
tr|A9TNL0|A9TNL0_PHYPA Predicted protein OS=Physcomitrella paten... 347 4e-94
tr|A9RHM6|A9RHM6_PHYPA Predicted protein OS=Physcomitrella paten... 347 4e-94
tr|A9U156|A9U156_PHYPA Predicted protein OS=Physcomitrella paten... 346 5e-94
tr|Q9AVU0|Q9AVU0_PICAB 40S ribosomal protein S2 OS=Picea abies P... 332 9e-90
tr|A9NMF2|A9NMF2_PICSI Putative uncharacterized protein OS=Picea... 332 9e-90
tr|A9NYW2|A9NYW2_PICSI Putative uncharacterized protein OS=Picea... 332 1e-89
tr|Q84M35|Q84M35_ORYSJ Os03g0807800 protein OS=Oryza sativa subs... 328 1e-88
tr|A2XN63|A2XN63_ORYSI Putative uncharacterized protein OS=Oryza... 328 1e-88
tr|A7PWE1|A7PWE1_VITVI Chromosome chr8 scaffold_34, whole genome... 327 2e-88
tr|A5BIQ8|A5BIQ8_VITVI Putative uncharacterized protein OS=Vitis... 327 2e-88
tr|A9PDI4|A9PDI4_POPTR Putative uncharacterized protein OS=Popul... 327 4e-88
tr|Q6ZIW7|Q6ZIW7_ORYSJ Putative 40S ribosomal protein S2 OS=Oryz... 320 5e-86
tr|A3ANV5|A3ANV5_ORYSJ Putative uncharacterized protein OS=Oryza... 319 8e-86
tr|B6TNR8|B6TNR8_MAIZE 40S ribosomal protein S2 OS=Zea mays PE=2... 316 5e-85
tr|Q8LDY5|Q8LDY5_ARATH 40S ribosomal protein S2 OS=Arabidopsis t... 315 9e-85
tr|B5BRD8|B5BRD8_ARATH 40S ribosomal protein S2 OS=Arabidopsis t... 314 2e-84
tr|Q0H634|Q0H634_SORBI Putative ribosomal protein (Fragment) OS=... 311 1e-83
tr|A2Q0R6|A2Q0R6_SOLSE Ribosomal protein S2 OS=Solea senegalensi... 296 7e-79
tr|Q6NWC3|Q6NWC3_DANRE Ribosomal protein S2 OS=Danio rerio GN=rp... 293 4e-78
tr|B5DGA8|B5DGA8_SALSA 40S ribosomal protein S2 OS=Salmo salar G... 293 5e-78
tr|Q6IPX5|Q6IPX5_HUMAN Ribosomal protein S2 OS=Homo sapiens GN=R... 293 5e-78
tr|Q8J014|Q8J014_HUMAN Ribosomal protein S2 OS=Homo sapiens GN=r... 292 8e-78
tr|Q3KQT6|Q3KQT6_HUMAN Ribosomal protein S2 OS=Homo sapiens GN=R... 292 8e-78
tr|Q7T0R9|Q7T0R9_XENLA Rps2e protein OS=Xenopus laevis GN=rps2 P... 292 1e-77
tr|Q6WEU1|Q6WEU1_MELAE S2 ribosomal protein (Fragment) OS=Melano... 292 1e-77
tr|Q6WEU0|Q6WEU0_MERMR S2 ribosomal protein (Fragment) OS=Merlan... 292 1e-77
tr|Q6WET9|Q6WET9_9TELE S2 ribosomal protein (Fragment) OS=Pollac... 292 1e-77
tr|Q6WET8|Q6WET8_9TELE S2 ribosomal protein (Fragment) OS=Pollac... 292 1e-77
tr|Q6WET7|Q6WET7_MICTO S2 ribosomal protein (Fragment) OS=Microg... 292 1e-77
>tr|A9U0C2|A9U0C2_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_227152 PE=3 SV=1
Length = 280
Score = 347 bits (889), Expect = 4e-94
Identities = 168/184 (91%), Positives = 178/184 (96%)
Frame = +1
Query: 1 KIMPVQKQTRAGQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR 180
KIMPVQKQTRAGQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR
Sbjct: 97 KIMPVQKQTRAGQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR 156
Query: 181 GYWGNKIGKPHTVPCKVTGKCGSVTVGLVPAPRGSGIVAARVPKKVLQFAGIDDVFTASR 360
GYWGNKIGKPHTVPCKVTGKCGSVTV LVPAPRGSGIVAARVPKKVLQFAGI+DVFT+SR
Sbjct: 157 GYWGNKIGKPHTVPCKVTGKCGSVTVRLVPAPRGSGIVAARVPKKVLQFAGIEDVFTSSR 216
Query: 361 GSTKTLGNFVKATFDCLLKTYGFLTPDLWRETRFVKSPFQEFTDHLAKPTRLSILDEVDK 540
GSTKTLGNFVKATF+CLLKTYGFLTPDLWRETRF KSPFQEFTD LAKP ++S++++V+K
Sbjct: 217 GSTKTLGNFVKATFECLLKTYGFLTPDLWRETRFSKSPFQEFTDFLAKPHKISVVEDVEK 276
Query: 541 PPAY 552
P Y
Sbjct: 277 TPVY 280
>tr|A9TNL0|A9TNL0_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_196764 PE=3 SV=1
Length = 280
Score = 347 bits (889), Expect = 4e-94
Identities = 168/184 (91%), Positives = 178/184 (96%)
Frame = +1
Query: 1 KIMPVQKQTRAGQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR 180
KIMPVQKQTRAGQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR
Sbjct: 97 KIMPVQKQTRAGQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR 156
Query: 181 GYWGNKIGKPHTVPCKVTGKCGSVTVGLVPAPRGSGIVAARVPKKVLQFAGIDDVFTASR 360
GYWGNKIGKPHTVPCKVTGKCGSVTV LVPAPRGSGIVAARVPKKVLQFAGI+DVFT+SR
Sbjct: 157 GYWGNKIGKPHTVPCKVTGKCGSVTVRLVPAPRGSGIVAARVPKKVLQFAGIEDVFTSSR 216
Query: 361 GSTKTLGNFVKATFDCLLKTYGFLTPDLWRETRFVKSPFQEFTDHLAKPTRLSILDEVDK 540
GSTKTLGNFVKATF+CLLKTYGFLTPDLWRETRF KSPFQEFTD LAKP ++S++++V+K
Sbjct: 217 GSTKTLGNFVKATFECLLKTYGFLTPDLWRETRFSKSPFQEFTDFLAKPHKISVVEDVEK 276
Query: 541 PPAY 552
P Y
Sbjct: 277 TPVY 280
>tr|A9RHM6|A9RHM6_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_114488 PE=3 SV=1
Length = 280
Score = 347 bits (889), Expect = 4e-94
Identities = 168/184 (91%), Positives = 178/184 (96%)
Frame = +1
Query: 1 KIMPVQKQTRAGQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR 180
KIMPVQKQTRAGQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR
Sbjct: 97 KIMPVQKQTRAGQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR 156
Query: 181 GYWGNKIGKPHTVPCKVTGKCGSVTVGLVPAPRGSGIVAARVPKKVLQFAGIDDVFTASR 360
GYWGNKIGKPHTVPCKVTGKCGSVTV LVPAPRGSGIVAARVPKKVLQFAGI+DVFT+SR
Sbjct: 157 GYWGNKIGKPHTVPCKVTGKCGSVTVRLVPAPRGSGIVAARVPKKVLQFAGIEDVFTSSR 216
Query: 361 GSTKTLGNFVKATFDCLLKTYGFLTPDLWRETRFVKSPFQEFTDHLAKPTRLSILDEVDK 540
GSTKTLGNFVKATF+CLLKTYGFLTPDLWRETRF KSPFQEFTD LAKP ++S++++V+K
Sbjct: 217 GSTKTLGNFVKATFECLLKTYGFLTPDLWRETRFSKSPFQEFTDFLAKPHKISVVEDVEK 276
Query: 541 PPAY 552
P Y
Sbjct: 277 TPVY 280
>tr|A9U156|A9U156_PHYPA Predicted protein OS=Physcomitrella patens
subsp. patens GN=PHYPADRAFT_173117 PE=3 SV=1
Length = 280
Score = 346 bits (888), Expect = 5e-94
Identities = 168/184 (91%), Positives = 178/184 (96%)
Frame = +1
Query: 1 KIMPVQKQTRAGQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR 180
KIMPVQKQTRAGQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR
Sbjct: 97 KIMPVQKQTRAGQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR 156
Query: 181 GYWGNKIGKPHTVPCKVTGKCGSVTVGLVPAPRGSGIVAARVPKKVLQFAGIDDVFTASR 360
GYWGNKIGKPHTVPCKVTGKCGSVTV LVPAPRGSGIVAARVPKKVLQFAGI+DVFT+SR
Sbjct: 157 GYWGNKIGKPHTVPCKVTGKCGSVTVRLVPAPRGSGIVAARVPKKVLQFAGIEDVFTSSR 216
Query: 361 GSTKTLGNFVKATFDCLLKTYGFLTPDLWRETRFVKSPFQEFTDHLAKPTRLSILDEVDK 540
GSTKTLGNFVKATF+CLLKTYGFLTPDLWRETRF KSPFQEFTD LAKP ++S++++V+K
Sbjct: 217 GSTKTLGNFVKATFECLLKTYGFLTPDLWRETRFSKSPFQEFTDFLAKPHKISVVEDVEK 276
Query: 541 PPAY 552
P Y
Sbjct: 277 TPIY 280
>tr|Q9AVU0|Q9AVU0_PICAB 40S ribosomal protein S2 OS=Picea abies PE=2
SV=1
Length = 232
Score = 332 bits (851), Expect = 9e-90
Identities = 163/180 (90%), Positives = 172/180 (95%)
Frame = +1
Query: 1 KIMPVQKQTRAGQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR 180
KIMPVQKQTRAGQRTRFKAFVVVGD NGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR
Sbjct: 49 KIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR 108
Query: 181 GYWGNKIGKPHTVPCKVTGKCGSVTVGLVPAPRGSGIVAARVPKKVLQFAGIDDVFTASR 360
GYWGNKIGKPHTVP KVTGKCGSVTV +VPAPRG+GIVAARVPKKVLQFAGI+DVFT+SR
Sbjct: 109 GYWGNKIGKPHTVPVKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVFTSSR 168
Query: 361 GSTKTLGNFVKATFDCLLKTYGFLTPDLWRETRFVKSPFQEFTDHLAKPTRLSILDEVDK 540
GSTKTLGNFVKATF+CLLKTYGFLTPDLWRETRF KSPFQE+TD LAKP + IL++VDK
Sbjct: 169 GSTKTLGNFVKATFECLLKTYGFLTPDLWRETRFSKSPFQEYTDLLAKPAKALILEDVDK 228
>tr|A9NMF2|A9NMF2_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 270
Score = 332 bits (851), Expect = 9e-90
Identities = 163/180 (90%), Positives = 172/180 (95%)
Frame = +1
Query: 1 KIMPVQKQTRAGQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR 180
KIMPVQKQTRAGQRTRFKAFVVVGD NGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR
Sbjct: 87 KIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR 146
Query: 181 GYWGNKIGKPHTVPCKVTGKCGSVTVGLVPAPRGSGIVAARVPKKVLQFAGIDDVFTASR 360
GYWGNKIGKPHTVP KVTGKCGSVTV +VPAPRG+GIVAARVPKKVLQFAGI+DVFT+SR
Sbjct: 147 GYWGNKIGKPHTVPVKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVFTSSR 206
Query: 361 GSTKTLGNFVKATFDCLLKTYGFLTPDLWRETRFVKSPFQEFTDHLAKPTRLSILDEVDK 540
GSTKTLGNFVKATF+CLLKTYGFLTPDLWRETRF KSPFQE+TD LAKP + IL++VDK
Sbjct: 207 GSTKTLGNFVKATFECLLKTYGFLTPDLWRETRFSKSPFQEYTDLLAKPAKALILEDVDK 266
>tr|A9NYW2|A9NYW2_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 280
Score = 332 bits (850), Expect = 1e-89
Identities = 162/180 (90%), Positives = 172/180 (95%)
Frame = +1
Query: 1 KIMPVQKQTRAGQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR 180
KIMPVQKQTRAGQRTRFKAFVVVGD NGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR
Sbjct: 97 KIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR 156
Query: 181 GYWGNKIGKPHTVPCKVTGKCGSVTVGLVPAPRGSGIVAARVPKKVLQFAGIDDVFTASR 360
GYWGNKIGKPHTVP KVTGKCGSVTV +VPAPRG+GIVAARVPKKVLQFAGI+DVFT+SR
Sbjct: 157 GYWGNKIGKPHTVPVKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVFTSSR 216
Query: 361 GSTKTLGNFVKATFDCLLKTYGFLTPDLWRETRFVKSPFQEFTDHLAKPTRLSILDEVDK 540
GSTKTLGNFVKATF+CLLKTYGFLTPDLWRETRF KSPFQE+TD LAKP + +L++VDK
Sbjct: 217 GSTKTLGNFVKATFECLLKTYGFLTPDLWRETRFSKSPFQEYTDLLAKPAKALVLEDVDK 276
>tr|Q84M35|Q84M35_ORYSJ Os03g0807800 protein OS=Oryza sativa subsp.
japonica GN=OSJNBa0059E14.8 PE=2 SV=1
Length = 274
Score = 328 bits (841), Expect = 1e-88
Identities = 157/176 (89%), Positives = 170/176 (96%)
Frame = +1
Query: 1 KIMPVQKQTRAGQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR 180
KI PVQKQTRAGQRTRFKAFVVVGDNNGHVGLGVKC+KEVATAIRGAIILAKLSV+PVRR
Sbjct: 91 KITPVQKQTRAGQRTRFKAFVVVGDNNGHVGLGVKCAKEVATAIRGAIILAKLSVVPVRR 150
Query: 181 GYWGNKIGKPHTVPCKVTGKCGSVTVGLVPAPRGSGIVAARVPKKVLQFAGIDDVFTASR 360
GYWGNKIG+PHTVPCKVTGKCGSVTV +VPAPRGSGIVAARVPKKVLQFAGI+DVFT+SR
Sbjct: 151 GYWGNKIGQPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIEDVFTSSR 210
Query: 361 GSTKTLGNFVKATFDCLLKTYGFLTPDLWRETRFVKSPFQEFTDHLAKPTRLSILD 528
GSTKTLGNFVKATFDCL+KTYGFLTPD WR+T+FVKSPFQE+TD LAKPT+ ++D
Sbjct: 211 GSTKTLGNFVKATFDCLMKTYGFLTPDFWRDTKFVKSPFQEYTDLLAKPTKALMID 266
>tr|A2XN63|A2XN63_ORYSI Putative uncharacterized protein OS=Oryza
sativa subsp. indica GN=OsI_13996 PE=3 SV=1
Length = 274
Score = 328 bits (841), Expect = 1e-88
Identities = 157/176 (89%), Positives = 170/176 (96%)
Frame = +1
Query: 1 KIMPVQKQTRAGQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR 180
KI PVQKQTRAGQRTRFKAFVVVGDNNGHVGLGVKC+KEVATAIRGAIILAKLSV+PVRR
Sbjct: 91 KITPVQKQTRAGQRTRFKAFVVVGDNNGHVGLGVKCAKEVATAIRGAIILAKLSVVPVRR 150
Query: 181 GYWGNKIGKPHTVPCKVTGKCGSVTVGLVPAPRGSGIVAARVPKKVLQFAGIDDVFTASR 360
GYWGNKIG+PHTVPCKVTGKCGSVTV +VPAPRGSGIVAARVPKKVLQFAGI+DVFT+SR
Sbjct: 151 GYWGNKIGQPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIEDVFTSSR 210
Query: 361 GSTKTLGNFVKATFDCLLKTYGFLTPDLWRETRFVKSPFQEFTDHLAKPTRLSILD 528
GSTKTLGNFVKATFDCL+KTYGFLTPD WR+T+FVKSPFQE+TD LAKPT+ ++D
Sbjct: 211 GSTKTLGNFVKATFDCLMKTYGFLTPDFWRDTKFVKSPFQEYTDLLAKPTKALMID 266
>tr|A7PWE1|A7PWE1_VITVI Chromosome chr8 scaffold_34, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00025575001
PE=3 SV=1
Length = 307
Score = 327 bits (839), Expect = 2e-88
Identities = 160/183 (87%), Positives = 170/183 (92%)
Frame = +1
Query: 1 KIMPVQKQTRAGQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR 180
KIMPVQKQTRAGQRTRFKAFVVVGD NGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR
Sbjct: 125 KIMPVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRR 184
Query: 181 GYWGNKIGKPHTVPCKVTGKCGSVTVGLVPAPRGSGIVAARVPKKVLQFAGIDDVFTASR 360
GYWGNKIGKPHTVPCKVTGKCGSVTV +VPAPRG+GIVAARVPKKVLQFAGI+DVFT+SR
Sbjct: 185 GYWGNKIGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVFTSSR 244
Query: 361 GSTKTLGNFVKATFDCLLKTYGFLTPDLWRETRFVKSPFQEFTDHLAKPTRLSILDEVDK 540
GSTKTLGNFVKATFDCLLKTY +LTPD WRETR+ KSPFQE TD LAKPT+ D+V++
Sbjct: 245 GSTKTLGNFVKATFDCLLKTYAYLTPDFWRETRYTKSPFQEHTDLLAKPTKAIYQDDVER 304
Query: 541 PPA 549
A
Sbjct: 305 VEA 307
|
|
|
K02981 |
|
|
AT3G57490.1 |
|
|
Pp1s400_15V6.1 |
|
|
67484 |
|
|
DK949563
|
703
|
myb domain protein
|
gametophyte
|
-
|
K09422
|
AT5G55020.1
|
Pp1s66_200V6.1
|
81112
|
|
|
DK949563
|
|
|
TST38A01NGRL0006_F04 |
|
|
TST38 |
|
|
703 |
|
|
myb domain protein |
|
|
DK949563 |
|
|
prothallia |
|
|
- |
|
|
CGTGAGCTCTAGTGCTATCTATATTTTCATGGCGTTCTTTGAGACCTGAGTGTATTCTCA
GTGGCGACTGAGCTCCCGGTTTCTCTCCACTGAGCTTTACCGACCCAGTAGTCAAGCACG
TCAGCCAGTCCCATTGCTGCAAAGAGAGTATATGGAGAATGTTTCGCCATTGAAGAAGGG
TCCCTGGACAGCCGAGGAGGATGCATTGCTACAGGCGTATGTAAAGCAGTATGGAGAAGG
TAACTGGAACTGTGTGCAGAAGTATTCTGGGGTTGCACGCTGTGGCAAGAGTTGCCGACT
CCGATGGACAAACCATCTTCGTCCAAACCTCAAGAAGTGCCGGTTCTCTCCTCAAGAGGA
GCGCCTTATAATAGAGCAGCATGCCCTTCTTGGGAACCGCTGGTCTCGCATATCGGCAAT
GCTCCATGGCCGTACTGACAACGAAGTCAAGAACTTCTGGAACACCCGTGTGAAGAGGCA
TATGCGGGCGGGTCAGCCCCTTTATCCTCCAGATATTGTTCCTGTTGCTTCTACCTGCTC
TCAACAACGAGAGCCTGAATGCTCTGCAGATGAAAGAAGAGCTGTGAGTTTGAGATTCAG
TGGGGGTAGTCGTGCAGATTCAAACACTGGGTGGAAGTTCTCACAAGTCCATGTCTACAG
GCATACAAAGCTTGAAAACCACCAAAGGAGAGACGTGTGTTGT |
|
|
- |
|
|
Link to BlastX Result : Swiss-Prot |
|
|
sp|Q0JIC2|GAM1_ORYSJ Transcription factor GAMYB OS=Oryza sativa subsp. japonica |
|
|
135 |
|
|
185.0 |
|
|
0.0 |
|
|
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK949563|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0006_F04, 5'
(703 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q0JIC2|GAM1_ORYSJ Transcription factor GAMYB OS=Oryza sativa ... 185 2e-46
sp|A2WW87|GAM1_ORYSI Transcription factor GAMYB OS=Oryza sativa ... 185 2e-46
sp|P80073|MYB2_PHYPA Myb-related protein Pp2 OS=Physcomitrella p... 146 9e-35
sp|Q7XBH4|MYB4_ORYSJ Myb-related protein Myb4 OS=Oryza sativa su... 144 6e-34
sp|Q9LXV2|MYB46_ARATH Transcription factor MYB46 OS=Arabidopsis ... 142 1e-33
sp|Q9LTF7|MYB82_ARATH Transcription factor MYB82 OS=Arabidopsis ... 141 4e-33
sp|Q9SZP1|MYB4_ARATH Transcription repressor MYB4 OS=Arabidopsis... 139 1e-32
sp|P27898|MYBP_MAIZE Myb-related protein P OS=Zea mays GN=P PE=2... 139 1e-32
sp|P20026|MYB1_HORVU Myb-related protein Hv1 OS=Hordeum vulgare ... 139 1e-32
sp|P20025|MYB38_MAIZE Myb-related protein Zm38 OS=Zea mays PE=2 ... 139 2e-32
sp|P81391|MYB05_ANTMA Myb-related protein 305 OS=Antirrhinum maj... 138 3e-32
sp|Q9SEI0|WER_ARATH Transcription factor WER OS=Arabidopsis thal... 138 3e-32
sp|Q50EX6|ODO1_PETHY Protein ODORANT1 OS=Petunia hybrida GN=ODO1... 138 3e-32
sp|Q8LPH6|MYB86_ARATH Transcription factor MYB86 OS=Arabidopsis ... 138 3e-32
sp|O22264|MYB12_ARATH Transcription factor MYB12 OS=Arabidopsis ... 137 4e-32
sp|O49608|MYB32_ARATH Transcription factor MYB32 OS=Arabidopsis ... 137 6e-32
sp|Q96276|MYB23_ARATH Transcription factor MYB23 OS=Arabidopsis ... 137 6e-32
sp|Q8GWP0|MYB39_ARATH Transcription factor MYB39 OS=Arabidopsis ... 137 7e-32
sp|P81393|MYB08_ANTMA Myb-related protein 308 OS=Antirrhinum maj... 137 7e-32
sp|P81392|MYB06_ANTMA Myb-related protein 306 OS=Antirrhinum maj... 136 1e-31
sp|Q38850|MYB5_ARATH Transcription repressor MYB5 OS=Arabidopsis... 135 2e-31
sp|Q38851|MYB6_ARATH Transcription repressor MYB6 OS=Arabidopsis... 135 2e-31
sp|P81394|MYB15_ANTMA Myb-related protein 315 OS=Antirrhinum maj... 135 2e-31
sp|P10290|MYBC_MAIZE Anthocyanin regulatory C1 protein OS=Zea ma... 135 3e-31
sp|Q9LX82|MYB48_ARATH Transcription factor MYB48 OS=Arabidopsis ... 135 3e-31
sp|P81395|MYB30_ANTMA Myb-related protein 330 OS=Antirrhinum maj... 135 3e-31
sp|Q4JL84|MYB59_ARATH Transcription factor MYB59 OS=Arabidopsis ... 134 4e-31
sp|P20024|MYB1_MAIZE Myb-related protein Zm1 OS=Zea mays PE=2 SV=1 134 4e-31
sp|P81396|MYB40_ANTMA Myb-related protein 340 OS=Antirrhinum maj... 134 6e-31
sp|Q9LK95|MYB21_ARATH Transcription factor MYB21 OS=Arabidopsis ... 133 8e-31
>sp|Q0JIC2|GAM1_ORYSJ Transcription factor GAMYB OS=Oryza sativa
subsp. japonica GN=GAM1 PE=2 SV=1
Length = 553
Score = 185 bits (470), Expect = 2e-46
Identities = 84/135 (62%), Positives = 106/135 (78%)
Frame = +2
Query: 167 PLKKGPWTAEEDALLQAYVKQYGEGNWNCVQKYSGVARCGKSCRLRWTNHLRPNLKKCRF 346
PLKKGPWT+ EDA+L YVK++GEGNWN VQK +G+ RCGKSCRLRW NHLRPNLKK F
Sbjct: 39 PLKKGPWTSAEDAILVDYVKKHGEGNWNAVQKNTGLFRCGKSCRLRWANHLRPNLKKGAF 98
Query: 347 SPQEERLIIEQHALLGNRWSRISAMLHGRTDNEVKNFWNTRVKRHMRAGQPLYPPDIVPV 526
+ +EERLII+ H+ +GN+W+R++A L GRTDNE+KN+WNTR+KR RAG P+YP +
Sbjct: 99 TAEEERLIIQLHSKMGNKWARMAAHLPGRTDNEIKNYWNTRIKRCQRAGLPIYPTSVCNQ 158
Query: 527 ASTCSQQREPECSAD 571
+S QQ CS+D
Sbjct: 159 SSNEDQQ----CSSD 169
>sp|A2WW87|GAM1_ORYSI Transcription factor GAMYB OS=Oryza sativa
subsp. indica GN=GAM1 PE=2 SV=1
Length = 553
Score = 185 bits (470), Expect = 2e-46
Identities = 84/135 (62%), Positives = 106/135 (78%)
Frame = +2
Query: 167 PLKKGPWTAEEDALLQAYVKQYGEGNWNCVQKYSGVARCGKSCRLRWTNHLRPNLKKCRF 346
PLKKGPWT+ EDA+L YVK++GEGNWN VQK +G+ RCGKSCRLRW NHLRPNLKK F
Sbjct: 39 PLKKGPWTSAEDAILVDYVKKHGEGNWNAVQKNTGLFRCGKSCRLRWANHLRPNLKKGAF 98
Query: 347 SPQEERLIIEQHALLGNRWSRISAMLHGRTDNEVKNFWNTRVKRHMRAGQPLYPPDIVPV 526
+ +EERLII+ H+ +GN+W+R++A L GRTDNE+KN+WNTR+KR RAG P+YP +
Sbjct: 99 TAEEERLIIQLHSKMGNKWARMAAHLPGRTDNEIKNYWNTRIKRCQRAGLPIYPTSVCNQ 158
Query: 527 ASTCSQQREPECSAD 571
+S QQ CS+D
Sbjct: 159 SSNEDQQ----CSSD 169
>sp|P80073|MYB2_PHYPA Myb-related protein Pp2 OS=Physcomitrella
patens GN=PP2 PE=2 SV=1
Length = 421
Score = 146 bits (369), Expect = 9e-35
Identities = 69/153 (45%), Positives = 101/153 (66%)
Frame = +2
Query: 170 LKKGPWTAEEDALLQAYVKQYGEGNWNCVQKYSGVARCGKSCRLRWTNHLRPNLKKCRFS 349
L++GPWT+EED L +++ G W + K +G+ RCGKSCRLRWTN+LRP+LK+ FS
Sbjct: 12 LRRGPWTSEEDQKLVSHITNNGLSCWRAIPKLAGLLRCGKSCRLRWTNYLRPDLKRGIFS 71
Query: 350 PQEERLIIEQHALLGNRWSRISAMLHGRTDNEVKNFWNTRVKRHMRAGQPLYPPDIVPVA 529
EE LI++ HA LGNRWSRI+A L GRTDNE+KN+WNTR+K+ +R+ Q L P +P+
Sbjct: 72 EAEENLILDLHATLGNRWSRIAAQLPGRTDNEIKNYWNTRLKKRLRS-QGLDPNTHLPLE 130
Query: 530 STCSQQREPECSADERRAVSLRFSGGSRADSNT 628
+ E + + + + S S+++ +
Sbjct: 131 DSKLDDTEDDTDDEGGDSSDVTMSDASKSEKRS 163
>sp|Q7XBH4|MYB4_ORYSJ Myb-related protein Myb4 OS=Oryza sativa
subsp. japonica GN=MYB4 PE=2 SV=2
Length = 257
Score = 144 bits (362), Expect = 6e-34
Identities = 74/167 (44%), Positives = 98/167 (58%), Gaps = 13/167 (7%)
Frame = +2
Query: 170 LKKGPWTAEEDALLQAYVKQYGEGNWNCVQKYSGVARCGKSCRLRWTNHLRPNLKKCRFS 349
LKKGPWT EED +L A+++++G GNW + K +G+ RCGKSCRLRW N+LRP++K+ FS
Sbjct: 12 LKKGPWTPEEDKVLVAHIQRHGHGNWRALPKQAGLLRCGKSCRLRWINYLRPDIKRGNFS 71
Query: 350 PQEERLIIEQHALLGNRWSRISAMLHGRTDNEVKNFWNTRVKRHMRA-----------GQ 496
+EE II H LLGNRWS I+A L GRTDNE+KN W+T +K+ + A G+
Sbjct: 72 KEEEDTIIHLHELLGNRWSAIAARLPGRTDNEIKNVWHTHLKKRLDAPAQGGHVAASGGK 131
Query: 497 PLYPPDIV--PVASTCSQQREPECSADERRAVSLRFSGGSRADSNTG 631
P P A+ + PE SA S S + N G
Sbjct: 132 KHKKPKSAKKPAAAAAAPPASPERSASSSVTESSMASSVAEEHGNAG 178
>sp|Q9LXV2|MYB46_ARATH Transcription factor MYB46 OS=Arabidopsis
thaliana GN=MYB46 PE=2 SV=1
Length = 280
Score = 142 bits (359), Expect = 1e-33
Identities = 63/109 (57%), Positives = 84/109 (77%)
Frame = +2
Query: 161 VSPLKKGPWTAEEDALLQAYVKQYGEGNWNCVQKYSGVARCGKSCRLRWTNHLRPNLKKC 340
V +KKG W+ EED+ L Y+ G+G W+ V K +G+ RCGKSCRLRW N+LRP+LK+
Sbjct: 15 VKKMKKGLWSPEEDSKLMQYMLSNGQGCWSDVAKNAGLQRCGKSCRLRWINYLRPDLKRG 74
Query: 341 RFSPQEERLIIEQHALLGNRWSRISAMLHGRTDNEVKNFWNTRVKRHMR 487
FSPQEE LII H++LGNRWS+I+A L GRTDNE+KNFWN+ +K+ ++
Sbjct: 75 AFSPQEEDLIIRFHSILGNRWSQIAARLPGRTDNEIKNFWNSTIKKRLK 123
>sp|Q9LTF7|MYB82_ARATH Transcription factor MYB82 OS=Arabidopsis
thaliana GN=MYB82 PE=1 SV=1
Length = 201
Score = 141 bits (355), Expect = 4e-33
Identities = 73/158 (46%), Positives = 97/158 (61%)
Frame = +2
Query: 155 ENVSPLKKGPWTAEEDALLQAYVKQYGEGNWNCVQKYSGVARCGKSCRLRWTNHLRPNLK 334
E S +K+G W EED +L++YV+ +GEGNW + + SG+ R GKSCRLRW N+LRPN+K
Sbjct: 7 EGKSYVKRGLWKPEEDMILKSYVETHGEGNWADISRRSGLKRGGKSCRLRWKNYLRPNIK 66
Query: 335 KCRFSPQEERLIIEQHALLGNRWSRISAMLHGRTDNEVKNFWNTRVKRHMRAGQPLYPPD 514
+ SPQE+ LII H LLGNRWS I+ L GRTDNEVKN+WNT + + + + P
Sbjct: 67 RGSMSPQEQDLIIRMHKLLGNRWSLIAGRLPGRTDNEVKNYWNTHLNKKPNSRRQNAPES 126
Query: 515 IVPVASTCSQQREPECSADERRAVSLRFSGGSRADSNT 628
IV +P S + RR+ G +SNT
Sbjct: 127 IVGATPFTD---KPVMSTELRRS----HGEGGEEESNT 157
>sp|Q9SZP1|MYB4_ARATH Transcription repressor MYB4 OS=Arabidopsis
thaliana GN=MYB4 PE=1 SV=1
Length = 282
Score = 139 bits (351), Expect = 1e-32
Identities = 65/128 (50%), Positives = 90/128 (70%), Gaps = 1/128 (0%)
Frame = +2
Query: 176 KGPWTAEEDALLQAYVKQYGEGNWNCVQKYSGVARCGKSCRLRWTNHLRPNLKKCRFSPQ 355
KG WT EED L AY+K +GEG W + K +G+ RCGKSCRLRW N+LRP+LK+ F+ +
Sbjct: 14 KGAWTKEEDERLVAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEE 73
Query: 356 EERLIIEQHALLGNRWSRISAMLHGRTDNEVKNFWNTRVKRHMRAGQPLYPPDIVPV-AS 532
E+ LII+ H+LLGN+WS I+ L GRTDNE+KN+WNT ++R + + + P P+ S
Sbjct: 74 EDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKL-INRGIDPTSHRPIQES 132
Query: 533 TCSQQREP 556
+ SQ +P
Sbjct: 133 SASQDSKP 140
>sp|P27898|MYBP_MAIZE Myb-related protein P OS=Zea mays GN=P PE=2
SV=1
Length = 399
Score = 139 bits (350), Expect = 1e-32
Identities = 68/139 (48%), Positives = 94/139 (67%), Gaps = 2/139 (1%)
Frame = +2
Query: 170 LKKGPWTAEEDALLQAYVKQYGEGNWNCVQKYSGVARCGKSCRLRWTNHLRPNLKKCRFS 349
LK+G WTAEED LL Y+ ++GEG+W + K +G+ RCGKSCRLRW N+LR ++K+ S
Sbjct: 12 LKRGRWTAEEDQLLANYIAEHGEGSWRSLPKNAGLLRCGKSCRLRWINYLRADVKRGNIS 71
Query: 350 PQEERLIIEQHALLGNRWSRISAMLHGRTDNEVKNFWNTRVKRHMRAGQPLYP--PDIVP 523
+EE +II+ HA LGNRWS I++ L GRTDNE+KN+WN+ + R + + Y PD
Sbjct: 72 KEEEDIIIKLHATLGNRWSLIASHLPGRTDNEIKNYWNSHLSRQIHTYRRKYTAGPDDTA 131
Query: 524 VASTCSQQREPECSADERR 580
+A S+ + SAD RR
Sbjct: 132 IAIDMSKLQ----SADRRR 146
>sp|P20026|MYB1_HORVU Myb-related protein Hv1 OS=Hordeum vulgare
GN=MYB1 PE=2 SV=1
Length = 267
Score = 139 bits (350), Expect = 1e-32
Identities = 60/103 (58%), Positives = 79/103 (76%)
Frame = +2
Query: 176 KGPWTAEEDALLQAYVKQYGEGNWNCVQKYSGVARCGKSCRLRWTNHLRPNLKKCRFSPQ 355
KG WT EED L AY+K +GEG W + K +G+ RCGKSCRLRW N+LRP+LK+ FS +
Sbjct: 14 KGAWTKEEDDRLTAYIKAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFSHE 73
Query: 356 EERLIIEQHALLGNRWSRISAMLHGRTDNEVKNFWNTRVKRHM 484
E+ LII+ H+LLGN+WS I+ L GRTDNE+KN+WNT ++R +
Sbjct: 74 EDELIIKLHSLLGNKWSLIAGRLPGRTDNEIKNYWNTHIRRKL 116
>sp|P20025|MYB38_MAIZE Myb-related protein Zm38 OS=Zea mays PE=2
SV=1
Length = 255
Score = 139 bits (349), Expect = 2e-32
Identities = 67/137 (48%), Positives = 93/137 (67%), Gaps = 6/137 (4%)
Frame = +2
Query: 176 KGPWTAEEDALLQAYVKQYGEGNWNCVQKYSGVARCGKSCRLRWTNHLRPNLKKCRFSPQ 355
+G WT EED L AY++ +GEG W + K +G+ RCGKSCRLRW N+LRP+LK+ F+
Sbjct: 14 RGAWTKEEDERLVAYIRAHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTAD 73
Query: 356 EERLIIEQHALLGNRWSRISAMLHGRTDNEVKNFWNTRVKRHMRAGQPLYPPDIVPVA-- 529
E+ LI++ H+LLGN+WS I+A L GRTDNE+KN+WNT V+R + G+ + P P+A
Sbjct: 74 EDDLIVKLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHVRRKL-LGRGIDPVTHRPIAAD 132
Query: 530 ----STCSQQREPECSA 568
+T S Q P +A
Sbjct: 133 AVTVTTVSFQPSPSAAA 149
|
|
|
Link to BlastX Result : TrEMBL |
|
|
tr|B5UAQ6|B5UAQ6_FAGCR Transcription factor MYB811 OS=Fagus crenata |
|
|
125 |
|
|
191.0 |
|
|
0.0 |
|
|
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK949563|Adiantum capillus-veneris mRNA, clone:
TST38A01NGRL0006_F04, 5'
(703 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|B5UAQ6|B5UAQ6_FAGCR Transcription factor MYB811 OS=Fagus cren... 191 3e-47
tr|A7QLQ1|A7QLQ1_VITVI Chromosome chr13 scaffold_120, whole geno... 191 3e-47
tr|A7PX33|A7PX33_VITVI Chromosome chr12 scaffold_36, whole genom... 191 4e-47
tr|A1Z369|A1Z369_SOLLC GAMYB-like2 OS=Solanum lycopersicum PE=2 ... 191 5e-47
tr|Q9FIA4|Q9FIA4_ARATH Similarity to MYB-related transcription f... 190 7e-47
tr|Q94FL7|Q94FL7_ARATH Putative transcription factor MYB120 OS=A... 190 7e-47
tr|Q9LRC3|Q9LRC3_WHEAT GAMyb protein (Fragment) OS=Triticum aest... 188 3e-46
tr|Q9ARM1|Q9ARM1_HORVU Transcription factor GAMyb OS=Hordeum vul... 188 3e-46
tr|Q96464|Q96464_HORVU GAMyb protein OS=Hordeum vulgare GN=Gam1 ... 188 3e-46
tr|Q1XHL5|Q1XHL5_TRIMO Transcription factor GAMYB OS=Triticum mo... 188 3e-46
tr|A5BSG8|A5BSG8_VITVI Putative uncharacterized protein (Chromos... 187 4e-46
tr|Q9XEP0|Q9XEP0_LOLTE Gibberellin MYB transcription factor OS=L... 187 6e-46
tr|A7P0P1|A7P0P1_VITVI Chromosome chr19 scaffold_4, whole genome... 187 7e-46
tr|B4F9Y7|B4F9Y7_MAIZE Putative uncharacterized protein OS=Zea m... 186 1e-45
tr|A8QU19|A8QU19_TRITU Transcription factor OS=Triticum turgidum... 186 1e-45
tr|A8QU17|A8QU17_WHEAT Transcription factor OS=Triticum aestivum... 186 1e-45
tr|A8QU14|A8QU14_WHEAT Transcription factor OS=Triticum aestivum... 186 1e-45
tr|A8QTZ7|A8QTZ7_TRITU Transcription factor OS=Triticum turgidum... 186 1e-45
tr|A8QTY7|A8QTY7_TRITU Transcription factor OS=Triticum turgidum... 186 1e-45
tr|A8QTY1|A8QTY1_TRITU Transcription factor OS=Triticum turgidum... 186 1e-45
tr|A8QTX7|A8QTX7_TRITU Transcription factor OS=Triticum turgidum... 186 1e-45
tr|Q9FR43|Q9FR43_TOBAC Anther-specific myb-related protein 2 OS=... 186 1e-45
tr|Q6IX76|Q6IX76_WHEAT Transcription factor Myb3 (Fragment) OS=T... 186 1e-45
tr|Q9XFN2|Q9XFN2_AVESA Myb protein OS=Avena sativa GN=gamyb PE=2... 186 2e-45
tr|B7ETP5|B7ETP5_ORYSJ cDNA clone:J033109N02, full insert sequen... 185 2e-45
tr|B7E984|B7E984_ORYSJ cDNA clone:001-123-F05, full insert seque... 185 2e-45
tr|Q9FR42|Q9FR42_TOBAC Anther-specific myb-related protein 1 OS=... 185 3e-45
tr|A9TIJ6|A9TIJ6_PHYPA Predicted protein (Fragment) OS=Physcomit... 185 3e-45
tr|A9SCW7|A9SCW7_PHYPA Predicted protein (Fragment) OS=Physcomit... 184 4e-45
tr|Q9FR97|Q9FR97_ARATH MYB65 (MYB transcription factor) (Putativ... 184 6e-45
>tr|B5UAQ6|B5UAQ6_FAGCR Transcription factor MYB811 OS=Fagus crenata
GN=FcMYB811 PE=4 SV=1
Length = 566
Score = 191 bits (486), Expect = 3e-47
Identities = 86/125 (68%), Positives = 101/125 (80%)
Frame = +2
Query: 170 LKKGPWTAEEDALLQAYVKQYGEGNWNCVQKYSGVARCGKSCRLRWTNHLRPNLKKCRFS 349
LKKGPWTA ED +L YV+++GEGNWN VQ+ SG+ARCGKSCRLRW NHLRPNLKK FS
Sbjct: 35 LKKGPWTAAEDGILMEYVRKHGEGNWNAVQRNSGLARCGKSCRLRWANHLRPNLKKGAFS 94
Query: 350 PQEERLIIEQHALLGNRWSRISAMLHGRTDNEVKNFWNTRVKRHMRAGQPLYPPDIVPVA 529
P+EERLI+E HA GN+W+R++A L GRTDNE+KN+WNTRVKR R G PLYP DI P
Sbjct: 95 PEEERLILELHAKYGNKWARMAAQLPGRTDNEIKNYWNTRVKRRQRQGLPLYPHDIQPSP 154
Query: 530 STCSQ 544
S+ Q
Sbjct: 155 SSQPQ 159
>tr|A7QLQ1|A7QLQ1_VITVI Chromosome chr13 scaffold_120, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00001720001
PE=4 SV=1
Length = 551
Score = 191 bits (486), Expect = 3e-47
Identities = 86/126 (68%), Positives = 104/126 (82%)
Frame = +2
Query: 170 LKKGPWTAEEDALLQAYVKQYGEGNWNCVQKYSGVARCGKSCRLRWTNHLRPNLKKCRFS 349
LKKGPWT+ EDA+L YVK++GEGNWN VQK+SG+ RCGKSCRLRW NHLRPNLKK F+
Sbjct: 38 LKKGPWTSSEDAILVEYVKKHGEGNWNAVQKHSGLFRCGKSCRLRWANHLRPNLKKGAFT 97
Query: 350 PQEERLIIEQHALLGNRWSRISAMLHGRTDNEVKNFWNTRVKRHMRAGQPLYPPDIVPVA 529
+EERLIIE HA +GN+W+R++A L GRTDNE+KN+WNTR+KR RAG PLYPP++ A
Sbjct: 98 AEEERLIIELHAKMGNKWARMAAHLPGRTDNEIKNYWNTRIKRRQRAGLPLYPPEVCFQA 157
Query: 530 STCSQQ 547
SQQ
Sbjct: 158 LQESQQ 163
>tr|A7PX33|A7PX33_VITVI Chromosome chr12 scaffold_36, whole genome
shotgun sequence OS=Vitis vinifera GN=GSVIVT00025883001
PE=4 SV=1
Length = 426
Score = 191 bits (485), Expect = 4e-47
Identities = 89/132 (67%), Positives = 105/132 (79%)
Frame = +2
Query: 170 LKKGPWTAEEDALLQAYVKQYGEGNWNCVQKYSGVARCGKSCRLRWTNHLRPNLKKCRFS 349
LKKGPWT EDA+L YVK++GEGNWN VQK SG++RCGKSCRLRW NHLRPNLKK FS
Sbjct: 29 LKKGPWTTAEDAVLVEYVKRHGEGNWNSVQKNSGLSRCGKSCRLRWANHLRPNLKKGAFS 88
Query: 350 PQEERLIIEQHALLGNRWSRISAMLHGRTDNEVKNFWNTRVKRHMRAGQPLYPPDIVPVA 529
P+EERLI+E HA LGN+W+R++A L GRTDNE+KN+WNTRVKR RAG PLYP + A
Sbjct: 89 PEEERLIVELHAKLGNKWARMAAQLPGRTDNEIKNYWNTRVKRRQRAGLPLYPQGVQKEA 148
Query: 530 STCSQQREPECS 565
QQ++P S
Sbjct: 149 -LHQQQQQPVLS 159
>tr|A1Z369|A1Z369_SOLLC GAMYB-like2 OS=Solanum lycopersicum PE=2
SV=1
Length = 504
Score = 191 bits (484), Expect = 5e-47
Identities = 85/129 (65%), Positives = 106/129 (82%)
Frame = +2
Query: 167 PLKKGPWTAEEDALLQAYVKQYGEGNWNCVQKYSGVARCGKSCRLRWTNHLRPNLKKCRF 346
PLKKGPWT+ EDA+L YV ++GEGNWN VQK+SG+ARCGKSCRLRW NHLRP+LKK F
Sbjct: 36 PLKKGPWTSAEDAILVEYVTKHGEGNWNAVQKHSGLARCGKSCRLRWANHLRPDLKKGAF 95
Query: 347 SPQEERLIIEQHALLGNRWSRISAMLHGRTDNEVKNFWNTRVKRHMRAGQPLYPPDIVPV 526
+P+EER IIE HA +GN+W+R++A L GRTDNE+KN+WNTR+KR RAG P+YP DI
Sbjct: 96 TPEEERHIIELHAKMGNKWARMAAELPGRTDNEIKNYWNTRIKRRQRAGLPIYPSDICFQ 155
Query: 527 ASTCSQQRE 553
+ T ++Q E
Sbjct: 156 SITENKQNE 164
>tr|Q9FIA4|Q9FIA4_ARATH Similarity to MYB-related transcription
factor OS=Arabidopsis thaliana PE=4 SV=1
Length = 581
Score = 190 bits (483), Expect = 7e-47
Identities = 84/118 (71%), Positives = 100/118 (84%)
Frame = +2
Query: 170 LKKGPWTAEEDALLQAYVKQYGEGNWNCVQKYSGVARCGKSCRLRWTNHLRPNLKKCRFS 349
LKKGPWTA ED +L AYV++ GEGNWN VQK +G+ARCGKSCRLRW NHLRPNLKK F+
Sbjct: 26 LKKGPWTAAEDEILAAYVRENGEGNWNAVQKNTGLARCGKSCRLRWANHLRPNLKKGSFT 85
Query: 350 PQEERLIIEQHALLGNRWSRISAMLHGRTDNEVKNFWNTRVKRHMRAGQPLYPPDIVP 523
EERLII+ HA LGN+W+R++A L GRTDNE+KN+WNTR+KR +R G PLYPPDI+P
Sbjct: 86 GDEERLIIQLHAQLGNKWARMAAQLPGRTDNEIKNYWNTRLKRLLRQGLPLYPPDIIP 143
>tr|Q94FL7|Q94FL7_ARATH Putative transcription factor MYB120
OS=Arabidopsis thaliana GN=MYB120 PE=2 SV=1
Length = 523
Score = 190 bits (483), Expect = 7e-47
Identities = 84/118 (71%), Positives = 100/118 (84%)
Frame = +2
Query: 170 LKKGPWTAEEDALLQAYVKQYGEGNWNCVQKYSGVARCGKSCRLRWTNHLRPNLKKCRFS 349
LKKGPWTA ED +L AYV++ GEGNWN VQK +G+ARCGKSCRLRW NHLRPNLKK F+
Sbjct: 26 LKKGPWTAAEDEILAAYVRENGEGNWNAVQKNTGLARCGKSCRLRWANHLRPNLKKGSFT 85
Query: 350 PQEERLIIEQHALLGNRWSRISAMLHGRTDNEVKNFWNTRVKRHMRAGQPLYPPDIVP 523
EERLII+ HA LGN+W+R++A L GRTDNE+KN+WNTR+KR +R G PLYPPDI+P
Sbjct: 86 GDEERLIIQLHAQLGNKWARMAAQLPGRTDNEIKNYWNTRLKRLLRQGLPLYPPDIIP 143
>tr|Q9LRC3|Q9LRC3_WHEAT GAMyb protein (Fragment) OS=Triticum
aestivum GN=Ta-GAMyb PE=2 SV=1
Length = 163
Score = 188 bits (477), Expect = 3e-46
Identities = 85/147 (57%), Positives = 109/147 (74%)
Frame = +2
Query: 167 PLKKGPWTAEEDALLQAYVKQYGEGNWNCVQKYSGVARCGKSCRLRWTNHLRPNLKKCRF 346
PLKKGPWT+ EDA+L YVK++GEGNWN VQK +G+ RCGKSCRLRW NHLRPNLKK F
Sbjct: 9 PLKKGPWTSAEDAILVDYVKKHGEGNWNAVQKNTGLFRCGKSCRLRWANHLRPNLKKGAF 68
Query: 347 SPQEERLIIEQHALLGNRWSRISAMLHGRTDNEVKNFWNTRVKRHMRAGQPLYPPDIVPV 526
+P+EERLII+ H+ +GN+W+R++A L GRTDNE+KN+WNTR+KR RAG P+YP +
Sbjct: 69 TPEEERLIIQLHSKMGNKWARMAAHLPGRTDNEIKNYWNTRIKRCQRAGLPIYPASVCNQ 128
Query: 527 ASTCSQQREPECSADERRAVSLRFSGG 607
+S QQ + + E + L G
Sbjct: 129 SSNEDQQGSSDFNCGENLSSDLLNGNG 155
>tr|Q9ARM1|Q9ARM1_HORVU Transcription factor GAMyb OS=Hordeum
vulgare GN=Gamyb PE=4 SV=1
Length = 553
Score = 188 bits (477), Expect = 3e-46
Identities = 85/147 (57%), Positives = 109/147 (74%)
Frame = +2
Query: 167 PLKKGPWTAEEDALLQAYVKQYGEGNWNCVQKYSGVARCGKSCRLRWTNHLRPNLKKCRF 346
PLKKGPWT+ EDA+L YVK++GEGNWN VQK +G+ RCGKSCRLRW NHLRPNLKK F
Sbjct: 41 PLKKGPWTSAEDAILVDYVKKHGEGNWNAVQKNTGLFRCGKSCRLRWANHLRPNLKKGAF 100
Query: 347 SPQEERLIIEQHALLGNRWSRISAMLHGRTDNEVKNFWNTRVKRHMRAGQPLYPPDIVPV 526
+P+EERLII+ H+ +GN+W+R++A L GRTDNE+KN+WNTR+KR RAG P+YP +
Sbjct: 101 TPEEERLIIQLHSKMGNKWARMAAHLPGRTDNEIKNYWNTRIKRCQRAGLPIYPASVCNQ 160
Query: 527 ASTCSQQREPECSADERRAVSLRFSGG 607
+S QQ + + E + L G
Sbjct: 161 SSNEDQQGSSDFNCGENLSSDLLNGNG 187
>tr|Q96464|Q96464_HORVU GAMyb protein OS=Hordeum vulgare GN=Gam1
PE=2 SV=1
Length = 553
Score = 188 bits (477), Expect = 3e-46
Identities = 85/147 (57%), Positives = 109/147 (74%)
Frame = +2
Query: 167 PLKKGPWTAEEDALLQAYVKQYGEGNWNCVQKYSGVARCGKSCRLRWTNHLRPNLKKCRF 346
PLKKGPWT+ EDA+L YVK++GEGNWN VQK +G+ RCGKSCRLRW NHLRPNLKK F
Sbjct: 41 PLKKGPWTSAEDAILVDYVKKHGEGNWNAVQKNTGLFRCGKSCRLRWANHLRPNLKKGAF 100
Query: 347 SPQEERLIIEQHALLGNRWSRISAMLHGRTDNEVKNFWNTRVKRHMRAGQPLYPPDIVPV 526
+P+EERLII+ H+ +GN+W+R++A L GRTDNE+KN+WNTR+KR RAG P+YP +
Sbjct: 101 TPEEERLIIQLHSKMGNKWARMAAHLPGRTDNEIKNYWNTRIKRCQRAGLPIYPASVCNQ 160
Query: 527 ASTCSQQREPECSADERRAVSLRFSGG 607
+S QQ + + E + L G
Sbjct: 161 SSNEDQQGSSDFNCGENLSSDLLNGNG 187
>tr|Q1XHL5|Q1XHL5_TRIMO Transcription factor GAMYB OS=Triticum
monococcum GN=GAMyb PE=2 SV=1
Length = 552
Score = 188 bits (477), Expect = 3e-46
Identities = 85/147 (57%), Positives = 109/147 (74%)
Frame = +2
Query: 167 PLKKGPWTAEEDALLQAYVKQYGEGNWNCVQKYSGVARCGKSCRLRWTNHLRPNLKKCRF 346
PLKKGPWT+ EDA+L YVK++GEGNWN VQK +G+ RCGKSCRLRW NHLRPNLKK F
Sbjct: 40 PLKKGPWTSAEDAILVDYVKKHGEGNWNAVQKNTGLFRCGKSCRLRWANHLRPNLKKGAF 99
Query: 347 SPQEERLIIEQHALLGNRWSRISAMLHGRTDNEVKNFWNTRVKRHMRAGQPLYPPDIVPV 526
+P+EERLII+ H+ +GN+W+R++A L GRTDNE+KN+WNTR+KR RAG P+YP +
Sbjct: 100 TPEEERLIIQLHSKMGNKWARMAAHLPGRTDNEIKNYWNTRIKRCQRAGLPIYPASVCNQ 159
Query: 527 ASTCSQQREPECSADERRAVSLRFSGG 607
+S QQ + + E + L G
Sbjct: 160 SSNEDQQGSSDFNCGENLSSDLLNGNG 186
|
|
|
K09422 |
|
|
AT5G55020.1 |
|
|
Pp1s66_200V6.1 |
|
|
81112 |
|
|
DK943510
|
141
|
hypothetical protein
|
sporophyte
|
CL7Contig2
|
-
|
-
|
Pp1s44_62V6.1
|
85461
|
|
|
DK943510
|
|
|
YMU02A01NGRL0003_A24 |
|
|
YMU02 |
|
|
141 |
|
|
hypothetical protein |
|
|
DK943510 |
|
|
young leaves |
|
|
CL7Contig2 |
|
|
ATGATTAAAAAAAACTCTTGCATACTATACGACATATTTATGTCATGATCTTATTCCATC
TTGCCAACTTGTGCGCCGTGGTATGATTAATGATATCACTATCCTACAAAAGAAAAAAAA
AAAAAAAAAAAAAAAAAAAAA |
|
|
- |
|
|
Link to BlastX Result : Swiss-Prot |
|
|
- |
|
|
- |
|
|
- |
|
|
- |
|
|
|
|
|
Link to BlastX Result : TrEMBL |
|
|
- |
|
|
- |
|
|
- |
|
|
- |
|
|
|
|
|
- |
|
|
- |
|
|
Pp1s44_62V6.1 |
|
|
85461 |
|
|
DK943511
|
347
|
putative Ribosomal protein S12/S23 family protein
|
sporophyte
|
CL105Contig1
|
-
|
-
|
Pp1s61_268V6.1
|
145246
|
|
|
DK943511
|
|
|
YMU02A01NGRL0003_B03 |
|
|
YMU02 |
|
|
347 |
|
|
putative Ribosomal protein S12/S23 family protein |
|
|
DK943511 |
|
|
young leaves |
|
|
CL105Contig1 |
|
|
GTGGAGTGTCTCTCCTTGCCCTTTTCAAGGAAAAGAAGGAGAAACCAAGGTCTTAAGTTT
TGAGAGGATATGTGAAGGTCCAGCAGGACTTGTACCTTATTGATTAGCTTCCTGGGAATG
TTCAGGAGAGATCATCACGAAAATTTTGTTAATCTCATGACATGAGCCAGCTGCTTCTTT
TCGATGCATGCGTTTCCTTCTTTTGAACCATGGGATGGAGAATCATTGTGTCAGTGAAGG
TAAAGATACTTTGTCTGTCCTCATTTCTTTACTGATATAGAAGGGATAGTTTCATTGCTT
AGAANAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
|
|
- |
|
|
Link to BlastX Result : Swiss-Prot |
|
|
sp|P46297|RS23_FRAAN 40S ribosomal protein S23 OS=Fragaria ananassa |
|
|
17 |
|
|
36.2 |
|
|
0.053 |
|
|
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK943511|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_B03, 5'
(302 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P46297|RS23_FRAAN 40S ribosomal protein S23 OS=Fragaria anana... 36 0.053
sp|Q9M5Z9|RS23_EUPES 40S ribosomal protein S23 OS=Euphorbia esul... 36 0.053
sp|P49201|RS232_ARATH 40S ribosomal protein S23-2 OS=Arabidopsis... 36 0.053
sp|Q9SF35|RS231_ARATH 40S ribosomal protein S23-1 OS=Arabidopsis... 36 0.053
sp|P32827|RS23_YEAST 40S ribosomal protein S23 OS=Saccharomyces ... 34 0.20
sp|Q6YIA2|RS23_SACCA 40S ribosomal protein S23 OS=Saccharomyces ... 34 0.20
sp|Q6YIA3|RS23_SACBA 40S ribosomal protein S23 OS=Saccharomyces ... 34 0.20
sp|Q6FLA8|RS23_CANGA 40S ribosomal protein S23 OS=Candida glabra... 34 0.20
sp|Q7N9N4|LIGB_PHOLL DNA ligase B OS=Photorhabdus luminescens su... 33 0.45
sp|Q9HE74|RS23_NEUCR 40S ribosomal protein S23 OS=Neurospora cra... 33 0.58
sp|Q873W8|RS23_ASPFU 40S ribosomal protein S23 OS=Aspergillus fu... 33 0.58
sp|Q962Q7|RS23_SPOFR 40S ribosomal protein S23 OS=Spodoptera fru... 32 1.3
sp|Q6EV23|RS23_PAPDA 40S ribosomal protein S23 OS=Papilio dardan... 32 1.3
sp|Q8T3U2|RS23_DROME 40S ribosomal protein S23 OS=Drosophila mel... 32 1.3
sp|Q86FP7|RS23_DERVA 40S ribosomal protein S23 OS=Dermacentor va... 32 1.3
sp|Q9GRJ3|RS23_LUMRU 40S ribosomal protein S23 OS=Lumbricus rube... 30 2.9
sp|P21339|MSB1_YEAST Morphogenesis-related protein MSB1 OS=Sacch... 30 4.9
sp|P79057|RS23_SCHPO 40S ribosomal protein S23 OS=Schizosaccharo... 29 8.4
sp|P62268|RS23_RAT 40S ribosomal protein S23 OS=Rattus norvegicu... 29 8.4
sp|Q6SA96|RS23_PIG 40S ribosomal protein S23 OS=Sus scrofa GN=RP... 29 8.4
sp|P62267|RS23_MOUSE 40S ribosomal protein S23 OS=Mus musculus G... 29 8.4
sp|Q90YQ1|RS23_ICTPU 40S ribosomal protein S23 OS=Ictalurus punc... 29 8.4
sp|P62266|RS23_HUMAN 40S ribosomal protein S23 OS=Homo sapiens G... 29 8.4
sp|P62298|RS23_CHILA 40S ribosomal protein S23 OS=Chinchilla lan... 29 8.4
sp|Q3T199|RS23_BOVIN 40S ribosomal protein S23 OS=Bos taurus GN=... 29 8.4
>sp|P46297|RS23_FRAAN 40S ribosomal protein S23 OS=Fragaria ananassa
GN=RPS23 PE=2 SV=1
Length = 142
Score = 36.2 bits (82), Expect = 0.053
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +3
Query: 3 GVSLLALFKEKKEKPRS 53
GVSLLALFKEKKEKPRS
Sbjct: 126 GVSLLALFKEKKEKPRS 142
>sp|Q9M5Z9|RS23_EUPES 40S ribosomal protein S23 OS=Euphorbia esula
GN=RPS23 PE=2 SV=1
Length = 142
Score = 36.2 bits (82), Expect = 0.053
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +3
Query: 3 GVSLLALFKEKKEKPRS 53
GVSLLALFKEKKEKPRS
Sbjct: 126 GVSLLALFKEKKEKPRS 142
>sp|P49201|RS232_ARATH 40S ribosomal protein S23-2 OS=Arabidopsis
thaliana GN=RPS23B PE=2 SV=2
Length = 142
Score = 36.2 bits (82), Expect = 0.053
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +3
Query: 3 GVSLLALFKEKKEKPRS 53
GVSLLALFKEKKEKPRS
Sbjct: 126 GVSLLALFKEKKEKPRS 142
>sp|Q9SF35|RS231_ARATH 40S ribosomal protein S23-1 OS=Arabidopsis
thaliana GN=RPS23A PE=2 SV=2
Length = 142
Score = 36.2 bits (82), Expect = 0.053
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +3
Query: 3 GVSLLALFKEKKEKPRS 53
GVSLLALFKEKKEKPRS
Sbjct: 126 GVSLLALFKEKKEKPRS 142
>sp|P32827|RS23_YEAST 40S ribosomal protein S23 OS=Saccharomyces
cerevisiae GN=RPS23A PE=1 SV=1
Length = 145
Score = 34.3 bits (77), Expect = 0.20
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +3
Query: 3 GVSLLALFKEKKEKPRS 53
GVSLLAL+KEKKEKPRS
Sbjct: 129 GVSLLALWKEKKEKPRS 145
>sp|Q6YIA2|RS23_SACCA 40S ribosomal protein S23 OS=Saccharomyces
castellii GN=RPS23A PE=3 SV=1
Length = 145
Score = 34.3 bits (77), Expect = 0.20
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +3
Query: 3 GVSLLALFKEKKEKPRS 53
GVSLLAL+KEKKEKPRS
Sbjct: 129 GVSLLALWKEKKEKPRS 145
>sp|Q6YIA3|RS23_SACBA 40S ribosomal protein S23 OS=Saccharomyces
bayanus GN=RPS23A PE=3 SV=1
Length = 145
Score = 34.3 bits (77), Expect = 0.20
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +3
Query: 3 GVSLLALFKEKKEKPRS 53
GVSLLAL+KEKKEKPRS
Sbjct: 129 GVSLLALWKEKKEKPRS 145
>sp|Q6FLA8|RS23_CANGA 40S ribosomal protein S23 OS=Candida glabrata
GN=RPS23 PE=3 SV=1
Length = 145
Score = 34.3 bits (77), Expect = 0.20
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +3
Query: 3 GVSLLALFKEKKEKPRS 53
GVSLLAL+KEKKEKPRS
Sbjct: 129 GVSLLALWKEKKEKPRS 145
>sp|Q7N9N4|LIGB_PHOLL DNA ligase B OS=Photorhabdus luminescens
subsp. laumondii GN=ligB PE=3 SV=1
Length = 580
Score = 33.1 bits (74), Expect = 0.45
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Frame = -3
Query: 195 KRMHRKEAAGSCHEINKIF-VMISPEHSQEANQ*G----TSPAGPSHILSKLKTLVSPSF 31
K HR++ GS N++ +M+ +HS E Q G + P GP+ + SKL+ L F
Sbjct: 196 KEEHRQQLLGSDGARNRVAGLMMRKDHSSELKQIGLFIWSWPDGPAEMESKLRKLADMGF 255
Query: 30 P 28
P
Sbjct: 256 P 256
>sp|Q9HE74|RS23_NEUCR 40S ribosomal protein S23 OS=Neurospora crassa
GN=rps-23 PE=3 SV=1
Length = 145
Score = 32.7 bits (73), Expect = 0.58
Identities = 15/17 (88%), Positives = 16/17 (94%)
Frame = +3
Query: 3 GVSLLALFKEKKEKPRS 53
GV LLAL+KEKKEKPRS
Sbjct: 129 GVGLLALWKEKKEKPRS 145
|
|
|
Link to BlastX Result : TrEMBL |
|
|
tr|Q8VYX8|Q8VYX8_PEA Ultraviolet-B-inducible ribosomal protein (Fragment) OS=Pisum sativum |
|
|
17 |
|
|
36.2 |
|
|
0.83 |
|
|
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK943511|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_B03, 5'
(302 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|Q8VYX8|Q8VYX8_PEA Ultraviolet-B-inducible ribosomal protein (... 36 0.83
tr|Q8L4F2|Q8L4F2_ORYSJ Os03g0818400 protein OS=Oryza sativa subs... 36 0.83
tr|Q8H6J0|Q8H6J0_MAIZE Putative 40S ribosomal protein OS=Zea may... 36 0.83
tr|Q677G5|Q677G5_HYAOR 40S ribosomal protein S23 (Fragment) OS=H... 36 0.83
tr|Q5YJP7|Q5YJP7_HYAOR 40S ribosomal protein S23 (Fragment) OS=H... 36 0.83
tr|Q38HT5|Q38HT5_SOLTU Putative uncharacterized protein OS=Solan... 36 0.83
tr|Q2Q9T1|Q2Q9T1_PICMA 40S ribosomal protein (Fragment) OS=Picea... 36 0.83
tr|Q1H5G2|Q1H5G2_ARATH At3g09680 OS=Arabidopsis thaliana PE=2 SV=1 36 0.83
tr|Q0JHZ3|Q0JHZ3_ORYSJ Os01g0834600 protein (Fragment) OS=Oryza ... 36 0.83
tr|B8LKM8|B8LKM8_PICSI Putative uncharacterized protein OS=Picea... 36 0.83
tr|B7FHD2|B7FHD2_MEDTR Putative uncharacterized protein OS=Medic... 36 0.83
tr|B6TI93|B6TI93_MAIZE 40S ribosomal protein S23 OS=Zea mays PE=... 36 0.83
tr|B6T6W0|B6T6W0_MAIZE 40S ribosomal protein S23 OS=Zea mays PE=... 36 0.83
tr|B4FMD3|B4FMD3_MAIZE Putative uncharacterized protein OS=Zea m... 36 0.83
tr|B4FBY5|B4FBY5_MAIZE 40S ribosomal protein S23 OS=Zea mays PE=... 36 0.83
tr|B3TLT8|B3TLT8_ELAGV 40S ribosomal protein S23 OS=Elaeis guine... 36 0.83
tr|B3TLT7|B3TLT7_ELAGV 40S ribosomal protein S23 OS=Elaeis guine... 36 0.83
tr|A9SB19|A9SB19_PHYPA Predicted protein OS=Physcomitrella paten... 36 0.83
tr|A9PBK6|A9PBK6_POPTR Putative uncharacterized protein OS=Popul... 36 0.83
tr|A7PSZ0|A7PSZ0_VITVI Chromosome chr8 scaffold_29, whole genome... 36 0.83
tr|A5BX16|A5BX16_VITVI Putative uncharacterized protein OS=Vitis... 36 0.83
tr|A2ZZB2|A2ZZB2_ORYSJ Putative uncharacterized protein OS=Oryza... 36 0.83
tr|A2WWQ4|A2WWQ4_ORYSI Putative uncharacterized protein OS=Oryza... 36 0.83
tr|Q7YY06|Q7YY06_CRYPV Ribosomal protein S23 OS=Cryptosporidium ... 36 0.83
tr|B6ADS5|B6ADS5_9CRYT 40S ribosomal protein S23, putative OS=Cr... 36 0.83
tr|A3FPT1|A3FPT1_CRYPV Ribosomal protein S23 (Fragment) OS=Crypt... 36 0.83
tr|B8C1Z7|B8C1Z7_THAPS RS23, ribosomal protein 23 40S small ribo... 35 1.8
tr|Q4UB42|Q4UB42_THEAN 40s ribosomal protein s23, putative OS=Th... 35 1.8
tr|Q4MYU6|Q4MYU6_THEPA 40S ribosomal protein S23, putative OS=Th... 35 1.8
tr|A7AM80|A7AM80_BABBO 40S ribosomal protein S12P, putative OS=B... 35 1.8
>tr|Q8VYX8|Q8VYX8_PEA Ultraviolet-B-inducible ribosomal protein
(Fragment) OS=Pisum sativum PE=2 SV=1
Length = 78
Score = 36.2 bits (82), Expect = 0.83
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +3
Query: 3 GVSLLALFKEKKEKPRS 53
GVSLLALFKEKKEKPRS
Sbjct: 62 GVSLLALFKEKKEKPRS 78
>tr|Q8L4F2|Q8L4F2_ORYSJ Os03g0818400 protein OS=Oryza sativa subsp.
japonica GN=P0460C04.38 PE=2 SV=1
Length = 142
Score = 36.2 bits (82), Expect = 0.83
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +3
Query: 3 GVSLLALFKEKKEKPRS 53
GVSLLALFKEKKEKPRS
Sbjct: 126 GVSLLALFKEKKEKPRS 142
>tr|Q8H6J0|Q8H6J0_MAIZE Putative 40S ribosomal protein OS=Zea mays
GN=ZMRS072.4 PE=4 SV=1
Length = 309
Score = 36.2 bits (82), Expect = 0.83
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +3
Query: 3 GVSLLALFKEKKEKPRS 53
GVSLLALFKEKKEKPRS
Sbjct: 253 GVSLLALFKEKKEKPRS 269
>tr|Q677G5|Q677G5_HYAOR 40S ribosomal protein S23 (Fragment)
OS=Hyacinthus orientalis GN=RPS23 PE=2 SV=1
Length = 71
Score = 36.2 bits (82), Expect = 0.83
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +3
Query: 3 GVSLLALFKEKKEKPRS 53
GVSLLALFKEKKEKPRS
Sbjct: 55 GVSLLALFKEKKEKPRS 71
>tr|Q5YJP7|Q5YJP7_HYAOR 40S ribosomal protein S23 (Fragment)
OS=Hyacinthus orientalis PE=2 SV=1
Length = 71
Score = 36.2 bits (82), Expect = 0.83
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +3
Query: 3 GVSLLALFKEKKEKPRS 53
GVSLLALFKEKKEKPRS
Sbjct: 55 GVSLLALFKEKKEKPRS 71
>tr|Q38HT5|Q38HT5_SOLTU Putative uncharacterized protein OS=Solanum
tuberosum PE=2 SV=1
Length = 142
Score = 36.2 bits (82), Expect = 0.83
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +3
Query: 3 GVSLLALFKEKKEKPRS 53
GVSLLALFKEKKEKPRS
Sbjct: 126 GVSLLALFKEKKEKPRS 142
>tr|Q2Q9T1|Q2Q9T1_PICMA 40S ribosomal protein (Fragment) OS=Picea
mariana PE=4 SV=1
Length = 82
Score = 36.2 bits (82), Expect = 0.83
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +3
Query: 3 GVSLLALFKEKKEKPRS 53
GVSLLALFKEKKEKPRS
Sbjct: 66 GVSLLALFKEKKEKPRS 82
>tr|Q1H5G2|Q1H5G2_ARATH At3g09680 OS=Arabidopsis thaliana PE=2 SV=1
Length = 142
Score = 36.2 bits (82), Expect = 0.83
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +3
Query: 3 GVSLLALFKEKKEKPRS 53
GVSLLALFKEKKEKPRS
Sbjct: 126 GVSLLALFKEKKEKPRS 142
>tr|Q0JHZ3|Q0JHZ3_ORYSJ Os01g0834600 protein (Fragment) OS=Oryza
sativa subsp. japonica GN=Os01g0834600 PE=4 SV=1
Length = 46
Score = 36.2 bits (82), Expect = 0.83
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +3
Query: 3 GVSLLALFKEKKEKPRS 53
GVSLLALFKEKKEKPRS
Sbjct: 30 GVSLLALFKEKKEKPRS 46
>tr|B8LKM8|B8LKM8_PICSI Putative uncharacterized protein OS=Picea
sitchensis PE=2 SV=1
Length = 142
Score = 36.2 bits (82), Expect = 0.83
Identities = 17/17 (100%), Positives = 17/17 (100%)
Frame = +3
Query: 3 GVSLLALFKEKKEKPRS 53
GVSLLALFKEKKEKPRS
Sbjct: 126 GVSLLALFKEKKEKPRS 142
|
|
|
- |
|
|
- |
|
|
Pp1s61_268V6.1 |
|
|
145246 |
|
|
DK943512
|
496
|
hypothetical protein
|
sporophyte
|
CL1Contig3
|
-
|
-
|
Pp1s127_73V6.2
|
424611
|
|
|
DK943512
|
|
|
YMU02A01NGRL0003_B04 |
|
|
YMU02 |
|
|
496 |
|
|
hypothetical protein |
|
|
DK943512 |
|
|
young leaves |
|
|
CL1Contig3 |
|
|
TATCGTAGCGGGTATAGTTTAGTGGTAAAAGTGTGACTCGTCTCGCAGTGATTTTGATAG
TTGAGGGATCGTATCTCGGCTAAATTAACTGAAAGAAAAAACTTTATCTTCGCAGAAAAT
ATGTGTTTTCTTATTATTTCTCCAAAATTAGAGGTAGATTAATCAATCTCGTCACTCATT
CATTTCAAGAACTAGGGAAGATAGTGACGAAGCAGAATTGTTTTGGTACCCCAAGAAATA
CTTGGTTTAATTTCTACTTCCGGGGAGATAAATAAAGAAAAAAATCTATGGGTAGACGTC
TAAGATAGCTGACTCATCGTCACTAAACCTCAGAGAATAAATCTGGGAAAGAAAGTTGGA
ATAAATAAATCCGGGTTTGTCAAGATTATTGAACATCTATTTGGTTGAACGGGATCCCTC
GTTTCAACAACTCGGTGAGATATATTTCCCTAAGGGTTTTTTCCTCAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAA |
|
|
- |
|
|
Link to BlastX Result : Swiss-Prot |
|
|
sp|O43114|ORC5_SCHPO Origin recognition complex subunit 5 OS=Schizosaccharomyces pombe |
|
|
57 |
|
|
31.2 |
|
|
2.3 |
|
|
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK943512|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_B04, 5'
(466 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|O43114|ORC5_SCHPO Origin recognition complex subunit 5 OS=Sch... 31 2.3
sp|O51578|EX5B_BORBU Exodeoxyribonuclease V beta chain OS=Borrel... 30 5.2
>sp|O43114|ORC5_SCHPO Origin recognition complex subunit 5
OS=Schizosaccharomyces pombe GN=orc5 PE=1 SV=2
Length = 455
Score = 31.2 bits (69), Expect = 2.3
Identities = 17/57 (29%), Positives = 33/57 (57%), Gaps = 8/57 (14%)
Frame = +1
Query: 247 LISTSGEINKEKNLWVDV*DS*LIVTKPQRI--------NLGKKVGINKSGFVKIIE 393
L+ T+ +++KE+N+W+++ D + RI ++ K GIN SGF+ ++E
Sbjct: 51 LLRTAFDLSKEENVWINLQDCFTVAHFWYRILIKVGVDKDIALKKGINISGFIYLLE 107
>sp|O51578|EX5B_BORBU Exodeoxyribonuclease V beta chain OS=Borrelia
burgdorferi GN=recB PE=3 SV=1
Length = 1169
Score = 30.0 bits (66), Expect = 5.2
Identities = 19/55 (34%), Positives = 30/55 (54%)
Frame = +1
Query: 217 IVLVPQEILGLISTSGEINKEKNLWVDV*DS*LIVTKPQRINLGKKVGINKSGFV 381
IVL+ + + LI+ +I EKNLW+ + + +TK Q+I K IN G +
Sbjct: 624 IVLLEKNEITLINAINKITFEKNLWIKIAN----ITKDQKIIEWAKNKINYKGLL 674
|
|
|
Link to BlastX Result : TrEMBL |
|
|
tr|A6D2J9|A6D2J9_9VIBR Putative uncharacterized protein OS=Vibrio shilonii AK1 |
|
|
50 |
|
|
35.0 |
|
|
1.8 |
|
|
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK943512|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_B04, 5'
(466 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|A6D2J9|A6D2J9_9VIBR Putative uncharacterized protein OS=Vibri... 35 1.8
tr|Q54CB7|Q54CB7_DICDI Putative uncharacterized protein OS=Dicty... 33 9.4
>tr|A6D2J9|A6D2J9_9VIBR Putative uncharacterized protein OS=Vibrio
shilonii AK1 GN=VSAK1_01567 PE=4 SV=1
Length = 319
Score = 35.0 bits (79), Expect = 1.8
Identities = 16/50 (32%), Positives = 31/50 (62%)
Frame = -3
Query: 188 LK*MSDEID*STSNFGEIIRKHIFSAKIKFFLSVNLAEIRSLNYQNHCET 39
LK +++E+D ST + ++++F A +F+L VNL + R++ Q C +
Sbjct: 234 LKQIANELDISTKSINLFFKEYLFIAPKRFYLLVNLFKFRNILIQGKCSS 283
>tr|Q54CB7|Q54CB7_DICDI Putative uncharacterized protein
OS=Dictyostelium discoideum GN=DDB_0191758 PE=4 SV=1
Length = 955
Score = 32.7 bits (73), Expect = 9.4
Identities = 19/55 (34%), Positives = 28/55 (50%)
Frame = +1
Query: 238 ILGLISTSGEINKEKNLWVDV*DS*LIVTKPQRINLGKKVGINKSGFVKIIEHLF 402
I+G ++ SGE+N E ++ DS +T IN+GK IN S + I F
Sbjct: 745 IIGTLNVSGELNSENGQFIFTLDS---LTNSTFINIGKNATINNSTLIIRINQYF 796
|
|
|
- |
|
|
- |
|
|
Pp1s127_73V6.2 |
|
|
424611 |
|
|
DK943513
|
468
|
putative ribosomal protein S27
|
sporophyte
|
CL78Contig1
|
-
|
AT3G61110.1
|
Pp1s165_39V6.1
|
163947
|
|
|
DK943513
|
|
|
YMU02A01NGRL0003_B05 |
|
|
YMU02 |
|
|
468 |
|
|
putative ribosomal protein S27 |
|
|
DK943513 |
|
|
young leaves |
|
|
CL78Contig1 |
|
|
GTCATGCTTTATGGATGTGAAGTGCCAGGGATGTTTTAGCATTACAACTGTGTTCAGCCA
TTCCCAGACTGTGGTCTTGTGCGGTAACTGCTCGGCGGTATTGTGCCAGCCCACAGGAGG
CCGCGCTCGACTTACTGAAGGCAGCTCCTTCAGGAAGAAGGGTGATTAAATGAGCATCTT
ACTTGTCGATTCCACATCTTCACCAGCCCCCCATGTACACCTAGTTCATCCTCCAAGCCG
AGGAGTATCAGAGTTTCTTTAACGAAATCAGAGTTTATGCATACCACATTTTCGAGTGTT
AGCTTTCAATGAGGGTCTCTATTGGCCTTGATTGTAAACCGTGAACAAAGTGGGAATTTG
AGCTTATGAGGATTTAGTGTGGTTGGTTACCACTTCGCAGTATCGATTAATGTTTACTTT
AATCAAAAAAAAAAAAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
|
|
- |
|
|
Link to BlastX Result : Swiss-Prot |
|
|
sp|Q9M2F1|RS272_ARATH 40S ribosomal protein S27-2 OS=Arabidopsis thaliana |
|
|
55 |
|
|
104.0 |
|
|
0.0 |
|
|
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK943513|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_B05, 5'
(424 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9M2F1|RS272_ARATH 40S ribosomal protein S27-2 OS=Arabidopsis... 104 2e-22
sp|Q96564|RS27_HORVU 40S ribosomal protein S27 OS=Hordeum vulgar... 100 2e-21
sp|Q8L953|RS273_ARATH 40S ribosomal protein S27-3 OS=Arabidopsis... 100 3e-21
sp|O64650|RS271_ARATH 40S ribosomal protein S27-1 OS=Arabidopsis... 98 1e-20
sp|P47903|RS27_CHLRE 40S ribosomal protein S27 OS=Chlamydomonas ... 95 1e-19
sp|O74330|RS27_SCHPO 40S ribosomal protein S27 OS=Schizosaccharo... 95 1e-19
sp|P47904|RS27_XENLA 40S ribosomal protein S27 OS=Xenopus laevis... 93 4e-19
sp|Q71TY3|RS27_RAT 40S ribosomal protein S27 OS=Rattus norvegicu... 93 4e-19
sp|Q5RBK1|RS27_PONAB 40S ribosomal protein S27 OS=Pongo abelii G... 93 4e-19
sp|Q7RVN2|RS27_NEUCR 40S ribosomal protein S27 OS=Neurospora cra... 93 4e-19
sp|Q6ZWU9|RS27_MOUSE 40S ribosomal protein S27 OS=Mus musculus G... 93 4e-19
sp|P42677|RS27_HUMAN 40S ribosomal protein S27 OS=Homo sapiens G... 93 4e-19
sp|Q2KHT7|RS27_BOVIN 40S ribosomal protein S27 OS=Bos taurus GN=... 93 4e-19
sp|P24051|RS27L_RAT 40S ribosomal protein S27-like protein OS=Ra... 93 4e-19
sp|Q6ZWY3|RS27L_MOUSE 40S ribosomal protein S27-like protein OS=... 93 4e-19
sp|Q71UM5|RS27L_HUMAN 40S ribosomal protein S27-like protein OS=... 93 4e-19
sp|Q3T0B7|RS27L_BOVIN 40S ribosomal protein S27-like protein OS=... 93 4e-19
sp|P55833|RS27_HOMAM 40S ribosomal protein S27 OS=Homarus americ... 89 9e-18
sp|Q9TXP0|RS27_CAEEL 40S ribosomal protein S27 OS=Caenorhabditis... 86 8e-17
sp|P38711|RS27B_YEAST 40S ribosomal protein S27-B OS=Saccharomyc... 84 2e-16
sp|P35997|RS27A_YEAST 40S ribosomal protein S27-A OS=Saccharomyc... 84 2e-16
sp|Q8T1V4|RS27_DICDI 40S ribosomal protein S27 OS=Dictyostelium ... 80 4e-15
sp|P38654|RS27_ENTHI 40S ribosomal protein S27 OS=Entamoeba hist... 55 9e-08
sp|A1RRN0|RS27_PYRIL 30S ribosomal protein S27e OS=Pyrobaculum i... 47 4e-05
sp|A4WLR8|RS27_PYRAR 30S ribosomal protein S27e OS=Pyrobaculum a... 43 5e-04
sp|A7I9Q6|RS27_METB6 30S ribosomal protein S27e OS=Methanoregula... 43 5e-04
sp|Q9YF01|RS27_AERPE 30S ribosomal protein S27e OS=Aeropyrum per... 43 5e-04
sp|Q97BP1|RS27_THEVO 30S ribosomal protein S27e OS=Thermoplasma ... 42 0.001
sp|Q9UXZ3|RS27_PYRAB 30S ribosomal protein S27e OS=Pyrococcus ab... 42 0.001
sp|A3MUV2|RS27_PYRCJ 30S ribosomal protein S27e OS=Pyrobaculum c... 41 0.002
>sp|Q9M2F1|RS272_ARATH 40S ribosomal protein S27-2 OS=Arabidopsis
thaliana GN=RPS27B PE=2 SV=2
Length = 86
Score = 104 bits (259), Expect = 2e-22
Identities = 45/55 (81%), Positives = 51/55 (92%)
Frame = +2
Query: 2 SCFMDVKCQGCFSITTVFSHSQTVVLCGNCSAVLCQPTGGRARLTEGSSFRKKGD 166
S FMDVKCQGCF+ITTVFSHSQTVV+CGNC +LCQPTGG+A+LTEG SFR+KGD
Sbjct: 32 SFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTILCQPTGGKAKLTEGCSFRRKGD 86
>sp|Q96564|RS27_HORVU 40S ribosomal protein S27 OS=Hordeum vulgare
GN=RPS27 PE=3 SV=2
Length = 86
Score = 100 bits (249), Expect = 2e-21
Identities = 45/55 (81%), Positives = 49/55 (89%)
Frame = +2
Query: 2 SCFMDVKCQGCFSITTVFSHSQTVVLCGNCSAVLCQPTGGRARLTEGSSFRKKGD 166
S FMDVKCQGCF+ITTVFSHSQTVV+C C VLCQPTGG+ARLTEG SFR+KGD
Sbjct: 32 SFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGGKARLTEGCSFRRKGD 86
>sp|Q8L953|RS273_ARATH 40S ribosomal protein S27-3 OS=Arabidopsis
thaliana GN=RPS27D PE=2 SV=2
Length = 84
Score = 100 bits (248), Expect = 3e-21
Identities = 45/53 (84%), Positives = 48/53 (90%)
Frame = +2
Query: 2 SCFMDVKCQGCFSITTVFSHSQTVVLCGNCSAVLCQPTGGRARLTEGSSFRKK 160
S FMDVKCQGCF+ITTVFSHSQTVV+CGNC VLCQPTGG+ARL EG SFRKK
Sbjct: 32 SFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGKARLQEGCSFRKK 84
>sp|O64650|RS271_ARATH 40S ribosomal protein S27-1 OS=Arabidopsis
thaliana GN=RPS27A PE=2 SV=1
Length = 84
Score = 98.2 bits (243), Expect = 1e-20
Identities = 43/53 (81%), Positives = 48/53 (90%)
Frame = +2
Query: 2 SCFMDVKCQGCFSITTVFSHSQTVVLCGNCSAVLCQPTGGRARLTEGSSFRKK 160
S FMDVKCQGCF+ITTVFSHSQTVV+CGNC +LC PTGG+A+LTEG SFRKK
Sbjct: 32 SFFMDVKCQGCFNITTVFSHSQTVVMCGNCQTLLCTPTGGKAKLTEGCSFRKK 84
>sp|P47903|RS27_CHLRE 40S ribosomal protein S27 OS=Chlamydomonas
reinhardtii GN=RPS27 PE=3 SV=1
Length = 86
Score = 95.1 bits (235), Expect = 1e-19
Identities = 43/55 (78%), Positives = 48/55 (87%)
Frame = +2
Query: 2 SCFMDVKCQGCFSITTVFSHSQTVVLCGNCSAVLCQPTGGRARLTEGSSFRKKGD 166
S FMDVKCQGCF+ITTVFSHSQTVV+CG+CS+VLC PTG RLTEG SFR+K D
Sbjct: 32 SFFMDVKCQGCFNITTVFSHSQTVVMCGSCSSVLCTPTGWPRRLTEGCSFRRKSD 86
>sp|O74330|RS27_SCHPO 40S ribosomal protein S27
OS=Schizosaccharomyces pombe GN=rps27 PE=2 SV=1
Length = 83
Score = 94.7 bits (234), Expect = 1e-19
Identities = 41/53 (77%), Positives = 49/53 (92%)
Frame = +2
Query: 2 SCFMDVKCQGCFSITTVFSHSQTVVLCGNCSAVLCQPTGGRARLTEGSSFRKK 160
S FMDVKC GCF+ITTVFSH+QTVV+CG+C++VLCQPTGG+ARL EG SFR+K
Sbjct: 30 SFFMDVKCPGCFNITTVFSHAQTVVICGSCASVLCQPTGGKARLMEGCSFRRK 82
>sp|P47904|RS27_XENLA 40S ribosomal protein S27 OS=Xenopus laevis
GN=rps27 PE=3 SV=2
Length = 84
Score = 93.2 bits (230), Expect = 4e-19
Identities = 42/53 (79%), Positives = 46/53 (86%)
Frame = +2
Query: 2 SCFMDVKCQGCFSITTVFSHSQTVVLCGNCSAVLCQPTGGRARLTEGSSFRKK 160
S FMDVKC GC+ ITTVFSH+QTVVLC CS VLCQPTGG+ARLTEG SFR+K
Sbjct: 30 SYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRK 82
>sp|Q71TY3|RS27_RAT 40S ribosomal protein S27 OS=Rattus norvegicus
GN=Rps27 PE=2 SV=3
Length = 84
Score = 93.2 bits (230), Expect = 4e-19
Identities = 42/53 (79%), Positives = 46/53 (86%)
Frame = +2
Query: 2 SCFMDVKCQGCFSITTVFSHSQTVVLCGNCSAVLCQPTGGRARLTEGSSFRKK 160
S FMDVKC GC+ ITTVFSH+QTVVLC CS VLCQPTGG+ARLTEG SFR+K
Sbjct: 30 SYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRK 82
>sp|Q5RBK1|RS27_PONAB 40S ribosomal protein S27 OS=Pongo abelii
GN=RPS27 PE=3 SV=3
Length = 84
Score = 93.2 bits (230), Expect = 4e-19
Identities = 42/53 (79%), Positives = 46/53 (86%)
Frame = +2
Query: 2 SCFMDVKCQGCFSITTVFSHSQTVVLCGNCSAVLCQPTGGRARLTEGSSFRKK 160
S FMDVKC GC+ ITTVFSH+QTVVLC CS VLCQPTGG+ARLTEG SFR+K
Sbjct: 30 SYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRK 82
>sp|Q7RVN2|RS27_NEUCR 40S ribosomal protein S27 OS=Neurospora crassa
GN=rps-27 PE=3 SV=1
Length = 82
Score = 93.2 bits (230), Expect = 4e-19
Identities = 41/53 (77%), Positives = 47/53 (88%)
Frame = +2
Query: 2 SCFMDVKCQGCFSITTVFSHSQTVVLCGNCSAVLCQPTGGRARLTEGSSFRKK 160
S FMDVKC GCF+ITTVFSH+QTVV+C C+ VLCQPTGG+ARLTEG SFR+K
Sbjct: 30 SFFMDVKCPGCFTITTVFSHAQTVVICQGCTTVLCQPTGGKARLTEGCSFRRK 82
|
|
|
Link to BlastX Result : TrEMBL |
|
|
tr|A9RMR9|A9RMR9_PHYPA Ribosomal protein S27 OS=Physcomitrella patens subsp. patens |
|
|
55 |
|
|
110.0 |
|
|
0.0 |
|
|
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK943513|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_B05, 5'
(424 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|A9RMR9|A9RMR9_PHYPA Ribosomal protein S27 OS=Physcomitrella p... 110 4e-23
tr|B5M1X0|B5M1X0_RHEAU Ribosomal protein S27-like protein OS=Rhe... 108 1e-22
tr|A9SLV7|A9SLV7_PHYPA Ribosomal protein S27 OS=Physcomitrella p... 108 1e-22
tr|Q00UP4|Q00UP4_OSTTA Ribosomal protein S27 OS=Ostreococcus tau... 108 2e-22
tr|B7FHA3|B7FHA3_MEDTR Putative uncharacterized protein OS=Medic... 108 2e-22
tr|A9T7M9|A9T7M9_PHYPA Ribosomal protein S27 OS=Physcomitrella p... 107 2e-22
tr|A7PA50|A7PA50_VITVI Ribosomal protein S27 OS=Vitis vinifera G... 107 2e-22
tr|Q3HVK9|Q3HVK9_SOLTU Ribosomal protein S27 OS=Solanum tuberosu... 107 4e-22
tr|Q2VCJ1|Q2VCJ1_SOLTU Ribosomal protein S27 OS=Solanum tuberosu... 107 4e-22
tr|B7FN54|B7FN54_MEDTR Putative uncharacterized protein OS=Medic... 107 4e-22
tr|A7QTA0|A7QTA0_VITVI Ribosomal protein S27 OS=Vitis vinifera G... 107 4e-22
tr|A5APU3|A5APU3_VITVI Ribosomal protein S27 OS=Vitis vinifera G... 107 4e-22
tr|A9NMW2|A9NMW2_PICSI Ribosomal protein S27 OS=Picea sitchensis... 106 6e-22
tr|A9NK30|A9NK30_PICSI Ribosomal protein S27 OS=Picea sitchensis... 105 1e-21
tr|Q6RJZ9|Q6RJZ9_CAPAN Ribosomal protein S27 OS=Capsicum annuum ... 103 3e-21
tr|A9PD60|A9PD60_POPTR Ribosomal protein S27 OS=Populus trichoca... 103 5e-21
tr|A9P8F6|A9P8F6_POPTR Ribosomal protein S27 OS=Populus trichoca... 103 5e-21
tr|A8J576|A8J576_CHLRE Ribosomal protein S27 OS=Chlamydomonas re... 102 7e-21
tr|A4S812|A4S812_OSTLU Ribosomal protein S27 OS=Ostreococcus luc... 102 7e-21
tr|A1YMY0|A1YMY0_BRACM Ribosomal protein S27 OS=Brassica campest... 102 9e-21
tr|Q9ZQX9|Q9ZQX9_MAIZE Ribosomal protein S27 OS=Zea mays PE=3 SV=1 101 2e-20
tr|Q5U7K8|Q5U7K8_9POAL Ribosomal protein S27 (Fragment) OS=Sacch... 101 2e-20
tr|Q5U7K1|Q5U7K1_9POAL Ribosomal protein S27 OS=Saccharum hybrid... 101 2e-20
tr|Q6K5R5|Q6K5R5_ORYSJ Ribosomal protein S27 OS=Oryza sativa sub... 100 4e-20
tr|A2X4T7|A2X4T7_ORYSI Ribosomal protein S27 OS=Oryza sativa sub... 100 4e-20
tr|A9PJL7|A9PJL7_POPJC Ribosomal protein S27 OS=Populus jackii P... 100 5e-20
tr|Q01L31|Q01L31_ORYSA Ribosomal protein S27 OS=Oryza sativa GN=... 99 8e-20
tr|B6TUY0|B6TUY0_MAIZE 40S ribosomal protein S27 OS=Zea mays PE=... 99 1e-19
tr|B8PCZ7|B8PCZ7_9APHY 40S ribosomal protein S27 OS=Postia place... 99 1e-19
tr|Q7XVZ0|Q7XVZ0_ORYSJ Ribosomal protein S27 OS=Oryza sativa sub... 98 2e-19
>tr|A9RMR9|A9RMR9_PHYPA Ribosomal protein S27 OS=Physcomitrella
patens subsp. patens GN=PHYPADRAFT_160009 PE=3 SV=1
Length = 86
Score = 110 bits (274), Expect = 4e-23
Identities = 51/55 (92%), Positives = 52/55 (94%)
Frame = +2
Query: 2 SCFMDVKCQGCFSITTVFSHSQTVVLCGNCSAVLCQPTGGRARLTEGSSFRKKGD 166
S FMDVKCQGCFSITTVFSHSQTVVLCG+CS VLCQPTGGRARLTEG SFRKKGD
Sbjct: 32 SFFMDVKCQGCFSITTVFSHSQTVVLCGSCSTVLCQPTGGRARLTEGCSFRKKGD 86
>tr|B5M1X0|B5M1X0_RHEAU Ribosomal protein S27-like protein OS=Rheum
australe PE=4 SV=1
Length = 86
Score = 108 bits (270), Expect = 1e-22
Identities = 49/55 (89%), Positives = 52/55 (94%)
Frame = +2
Query: 2 SCFMDVKCQGCFSITTVFSHSQTVVLCGNCSAVLCQPTGGRARLTEGSSFRKKGD 166
S FMDVKCQGCF+ITTVFSHSQTVV+CGNC AVLCQPTGGRARLTEG SFR+KGD
Sbjct: 32 SFFMDVKCQGCFNITTVFSHSQTVVVCGNCQAVLCQPTGGRARLTEGCSFRRKGD 86
>tr|A9SLV7|A9SLV7_PHYPA Ribosomal protein S27 OS=Physcomitrella
patens subsp. patens GN=PHYPADRAFT_213752 PE=3 SV=1
Length = 86
Score = 108 bits (270), Expect = 1e-22
Identities = 50/55 (90%), Positives = 52/55 (94%)
Frame = +2
Query: 2 SCFMDVKCQGCFSITTVFSHSQTVVLCGNCSAVLCQPTGGRARLTEGSSFRKKGD 166
S FMDVKCQGCFSITTVFSHSQTVVLCG+CS VLCQPTGGRARLTEG SFRKKG+
Sbjct: 32 SFFMDVKCQGCFSITTVFSHSQTVVLCGSCSTVLCQPTGGRARLTEGCSFRKKGE 86
>tr|Q00UP4|Q00UP4_OSTTA Ribosomal protein S27 OS=Ostreococcus tauri
GN=Ot16g00060 PE=3 SV=1
Length = 100
Score = 108 bits (269), Expect = 2e-22
Identities = 49/55 (89%), Positives = 53/55 (96%)
Frame = +2
Query: 2 SCFMDVKCQGCFSITTVFSHSQTVVLCGNCSAVLCQPTGGRARLTEGSSFRKKGD 166
S FMDVKCQGCF+ITTVFSHSQTVVLCG+CSAVLCQPTGG+ARLTEG SFR+KGD
Sbjct: 46 SFFMDVKCQGCFNITTVFSHSQTVVLCGSCSAVLCQPTGGKARLTEGCSFRRKGD 100
>tr|B7FHA3|B7FHA3_MEDTR Putative uncharacterized protein OS=Medicago
truncatula PE=4 SV=1
Length = 86
Score = 108 bits (269), Expect = 2e-22
Identities = 49/55 (89%), Positives = 51/55 (92%)
Frame = +2
Query: 2 SCFMDVKCQGCFSITTVFSHSQTVVLCGNCSAVLCQPTGGRARLTEGSSFRKKGD 166
S FMDVKCQGCF+ITTVFSHSQTVV+CGNC VLCQPTGGRARLTEG SFRKKGD
Sbjct: 32 SFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGRARLTEGCSFRKKGD 86
>tr|A9T7M9|A9T7M9_PHYPA Ribosomal protein S27 OS=Physcomitrella
patens subsp. patens GN=PHYPADRAFT_219674 PE=3 SV=1
Length = 86
Score = 107 bits (268), Expect = 2e-22
Identities = 50/55 (90%), Positives = 51/55 (92%)
Frame = +2
Query: 2 SCFMDVKCQGCFSITTVFSHSQTVVLCGNCSAVLCQPTGGRARLTEGSSFRKKGD 166
S FMDVKCQGCFSITTVFSHSQTVVLC +CS VLCQPTGGRARLTEG SFRKKGD
Sbjct: 32 SFFMDVKCQGCFSITTVFSHSQTVVLCSSCSTVLCQPTGGRARLTEGCSFRKKGD 86
>tr|A7PA50|A7PA50_VITVI Ribosomal protein S27 OS=Vitis vinifera
GN=GSVIVT00037972001 PE=3 SV=1
Length = 98
Score = 107 bits (268), Expect = 2e-22
Identities = 49/55 (89%), Positives = 51/55 (92%)
Frame = +2
Query: 2 SCFMDVKCQGCFSITTVFSHSQTVVLCGNCSAVLCQPTGGRARLTEGSSFRKKGD 166
S FMDVKCQGCF+ITTVFSHSQTVV+CGNC VLCQPTGGRARLTEG SFRKKGD
Sbjct: 44 SFFMDVKCQGCFNITTVFSHSQTVVVCGNCQLVLCQPTGGRARLTEGCSFRKKGD 98
>tr|Q3HVK9|Q3HVK9_SOLTU Ribosomal protein S27 OS=Solanum tuberosum
PE=3 SV=1
Length = 86
Score = 107 bits (266), Expect = 4e-22
Identities = 48/55 (87%), Positives = 51/55 (92%)
Frame = +2
Query: 2 SCFMDVKCQGCFSITTVFSHSQTVVLCGNCSAVLCQPTGGRARLTEGSSFRKKGD 166
S FMDVKCQGCF+ITTVFSHSQTVV+CGNC VLCQPTGGRARLTEG SFR+KGD
Sbjct: 32 SFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGRARLTEGCSFRRKGD 86
>tr|Q2VCJ1|Q2VCJ1_SOLTU Ribosomal protein S27 OS=Solanum tuberosum
PE=3 SV=1
Length = 86
Score = 107 bits (266), Expect = 4e-22
Identities = 48/55 (87%), Positives = 51/55 (92%)
Frame = +2
Query: 2 SCFMDVKCQGCFSITTVFSHSQTVVLCGNCSAVLCQPTGGRARLTEGSSFRKKGD 166
S FMDVKCQGCF+ITTVFSHSQTVV+CGNC VLCQPTGGRARLTEG SFR+KGD
Sbjct: 32 SFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGRARLTEGCSFRRKGD 86
>tr|B7FN54|B7FN54_MEDTR Putative uncharacterized protein OS=Medicago
truncatula PE=4 SV=1
Length = 86
Score = 107 bits (266), Expect = 4e-22
Identities = 48/55 (87%), Positives = 51/55 (92%)
Frame = +2
Query: 2 SCFMDVKCQGCFSITTVFSHSQTVVLCGNCSAVLCQPTGGRARLTEGSSFRKKGD 166
S FMDVKCQGCF+ITTVFSHSQTVV+CGNC VLCQPTGG+ARLTEG SFRKKGD
Sbjct: 32 SFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGKARLTEGCSFRKKGD 86
|
|
|
- |
|
|
AT3G61110.1 |
|
|
Pp1s165_39V6.1 |
|
|
163947 |
|
|
DK943514
|
646
|
hypothetical protein
|
sporophyte
|
CL8Contig1
|
-
|
-
|
Pp1s25_348V6.1
|
403268
|
|
|
DK943514
|
|
|
YMU02A01NGRL0003_B06 |
|
|
YMU02 |
|
|
646 |
|
|
hypothetical protein |
|
|
DK943514 |
|
|
young leaves |
|
|
CL8Contig1 |
|
|
GTTCACAGAACTCCCTCACGTTCCTTTGCTTCGAAACGAGGGTAGGCACACCAGACACAA
AATTGAGTGATGCGTAATACGGACGGAGGTTCGAATCCTCGCAAGGCGTCCGGAACAAAA
GTCGTCTTGCATTTCCGGAATAAGTCTCCCGACCCCTTGCTTTCCACCAAGAGAAAGCAA
AAAGAACCCGGGCGGGAAAGTTTGATTTGGTCAATCTCCTTGCCCCTCCGAACTAAGTGG
CGACGAAACCGATCTTCGTATCGAGATGCGGGTGGGTCCTGTTGCTTCGGTGTCCCCCGA
AGCTAAATCTATCAAAAGAAAAGGAAATCCTTGGGAAATTTAATATTCCCTAGTACCAAT
CCGTAAAAATGGAATGTAAATCCTGGGATTGTTGACTACTAAGAGTCTCTCTTATCATTC
TATGGAGTTTCCATAGATAGGTAAGGTCGTAAGTCCCACCTTTTCTATTTTCCCCTCTCC
AAACCAAGGGTGGGGCGGCAAAGAAGATATTGGGTCTCGCCCCAATGCGGTACTCAAAGA
ATAGTCTTACGGGATAGAGAAGAAGGAGGGGTAGGAAGTGGCGGCTTAGACTGATACACG
GACGTGATTCGTCTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
|
|
- |
|
|
Link to BlastX Result : Swiss-Prot |
|
|
sp|Q9ASY9|PM36_ARATH Seed maturation protein PM36 homolog OS=Arabidopsis thaliana |
|
|
46 |
|
|
32.7 |
|
|
1.5 |
|
|
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK943514|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_B06, 5'
(615 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9ASY9|PM36_ARATH Seed maturation protein PM36 homolog OS=Ara... 33 1.5
sp|Q6NRW0|MTBP_XENLA Mdm2-binding protein OS=Xenopus laevis GN=m... 31 4.4
sp|Q6A7M3|Y1495_PROAC UPF0090 protein PPA1495 OS=Propionibacteri... 31 5.8
sp|A1DNV8|YD156_NEOFI WD repeat-containing protein NFIA_058290 O... 30 7.5
sp|Q0P4G8|MTBP_XENTR Mdm2-binding protein OS=Xenopus tropicalis ... 30 7.5
sp|Q6C8W4|PLPL_YARLI Patatin-like phospholipase domain-containin... 30 9.8
sp|Q6PJG2|CN043_HUMAN Uncharacterized protein C14orf43 OS=Homo s... 30 9.9
>sp|Q9ASY9|PM36_ARATH Seed maturation protein PM36 homolog
OS=Arabidopsis thaliana GN=At3g16990 PE=1 SV=2
Length = 221
Score = 32.7 bits (73), Expect = 1.5
Identities = 17/46 (36%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Frame = +2
Query: 236 SGDETDLRIEMRVGPVASVSPEAKSIKRKGNPWEI*YS-LVPIRKN 370
SG+ +D+ E+ +G +AS++ E + KR+G+ W++ +S +VP R N
Sbjct: 69 SGESSDM--EVVLGGIASLNDEIEWFKREGSKWDVDFSTVVPQRAN 112
>sp|Q6NRW0|MTBP_XENLA Mdm2-binding protein OS=Xenopus laevis GN=mtbp
PE=2 SV=1
Length = 860
Score = 31.2 bits (69), Expect = 4.4
Identities = 22/75 (29%), Positives = 38/75 (50%), Gaps = 3/75 (4%)
Frame = -2
Query: 278 DPPA-SRYEDRFRRHLVRRGKEIDQIKLSRPGSFC--FLLVESKGSGDLFRKCKTTFVPD 108
+PPA R ++R ++ R+ K+I + G +C + L++ KGSG CK T +
Sbjct: 335 NPPALQRSSKKWREYMSRKPKDIKVPGVELKGEYCSYYFLIQGKGSG----LCKATLLHS 390
Query: 107 ALRGFEPPSVLRITQ 63
A + S+L + Q
Sbjct: 391 ASQISGAASLLLLHQ 405
>sp|Q6A7M3|Y1495_PROAC UPF0090 protein PPA1495 OS=Propionibacterium
acnes GN=PPA1495 PE=3 SV=1
Length = 178
Score = 30.8 bits (68), Expect = 5.8
Identities = 19/62 (30%), Positives = 30/62 (48%)
Frame = +2
Query: 131 ISGISLPTPCFPPRESKKNPGGKV*FGQSPCPSELSGDETDLRIEMRVGPVASVSPEAKS 310
+S + TP PR ++N G V F +P + SG+ D RI V ++ EA++
Sbjct: 80 VSSRGVSTPLTQPRHYRRNIGHLVRFTLNPAEEQKSGETFDGRIAEAGEEVVTLEVEAEN 139
Query: 311 IK 316
K
Sbjct: 140 SK 141
>sp|A1DNV8|YD156_NEOFI WD repeat-containing protein NFIA_058290
OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 /
NRRL 181) GN=NFIA_058290 PE=3 SV=1
Length = 527
Score = 30.4 bits (67), Expect = 7.5
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 3/52 (5%)
Frame = +2
Query: 161 FPPRESKKNPGGKV*FGQSPCPSELSGDETDL---RIEMRVGPVASVSPEAK 307
FPP+ ++ +PGG + P P ++ ++ DL R+ R+ +A+ S AK
Sbjct: 38 FPPKSARSSPGGLTKPKKKPAPKKVKKEDEDLVPRRMSSRLRGLAADSEVAK 89
>sp|Q0P4G8|MTBP_XENTR Mdm2-binding protein OS=Xenopus tropicalis
GN=mtbp PE=2 SV=2
Length = 867
Score = 30.4 bits (67), Expect = 7.5
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 3/61 (4%)
Frame = -2
Query: 278 DPPA-SRYEDRFRRHLVRRGKEIDQIKLSRPGSFC--FLLVESKGSGDLFRKCKTTFVPD 108
+PPA R ++R ++ R+ K+I + G +C + L++ KGSG CK T +
Sbjct: 339 NPPALQRSSKKWREYMSRKPKDIKVPGVELKGEYCSYYFLIQGKGSG----FCKATLLHS 394
Query: 107 A 105
A
Sbjct: 395 A 395
>sp|Q6C8W4|PLPL_YARLI Patatin-like phospholipase domain-containing
protein YALI0D16379g OS=Yarrowia lipolytica
GN=YALI0D16379g PE=3 SV=1
Length = 818
Score = 30.0 bits (66), Expect = 9.8
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = -3
Query: 481 WRGENRKGGTYDLTYLWKLHRMIRETLSSQQSQDLHSI 368
WR EN K G YD + KL +M+R+ Q++DL +I
Sbjct: 292 WR-ENPKFGYYDHVTISKLTKMVRKLRLQDQAEDLSNI 328
>sp|Q6PJG2|CN043_HUMAN Uncharacterized protein C14orf43 OS=Homo
sapiens GN=C14orf43 PE=1 SV=2
Length = 1045
Score = 30.0 bits (66), Expect = 9.9
Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Frame = +1
Query: 73 RNTDGGSNPRK---ASGTKVVLHFRNKSPDPLLSTKRKQKEPGRESLIWSISLPLRT 234
++ G RK AS TK + F +P L+TKR +++ G LI +S+P+RT
Sbjct: 483 KDGSGSEEKRKSVLASTTKCGVEFS----EPSLATKRAREDSGMVPLIIPVSVPVRT 535
|
|
|
Link to BlastX Result : TrEMBL |
|
|
tr|B8HLS9|B8HLS9_9CHRO Metallophosphoesterase OS=Cyanothece sp. PCC 7425 |
|
|
83 |
|
|
35.4 |
|
|
2.7 |
|
|
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK943514|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_B06, 5'
(615 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|B8HLS9|B8HLS9_9CHRO Metallophosphoesterase OS=Cyanothece sp. ... 35 2.7
tr|A1CQJ5|A1CQJ5_ASPCL Putative uncharacterized protein OS=Asper... 35 2.7
tr|Q7UIE7|Q7UIE7_RHOBA Putative uncharacterized protein OS=Rhodo... 35 2.7
tr|B6KNM5|B6KNM5_TOXGO Putative uncharacterized protein OS=Toxop... 35 4.5
tr|Q07YM3|Q07YM3_SHEFN ATP synthase A chain OS=Shewanella frigid... 34 7.7
tr|B6KD79|B6KD79_TOXGO Putative uncharacterized protein OS=Toxop... 34 7.7
>tr|B8HLS9|B8HLS9_9CHRO Metallophosphoesterase OS=Cyanothece sp. PCC
7425 GN=Cyan7425_1187 PE=4 SV=1
Length = 243
Score = 35.4 bits (80), Expect = 2.7
Identities = 27/83 (32%), Positives = 36/83 (43%), Gaps = 8/83 (9%)
Frame = -3
Query: 229 GGARRLTKSNFPAR---VLFAFSWWKARGRETYSGNARRLLFRTPCEDSNLRPYYASLNF 59
G + S FP + L SW + GRET +G R LF E PY+ L
Sbjct: 66 GNHELMMLSAFPQQSEHTLHLLSWLSSGGRETIAGYTSRDLFLEHMEWMQTLPYFLDLGD 125
Query: 58 V----SGV-PTLVSKQRNVREFC 5
+ +GV PTL ++ EFC
Sbjct: 126 IWLVHAGVEPTLPLAEQTTEEFC 148
>tr|A1CQJ5|A1CQJ5_ASPCL Putative uncharacterized protein
OS=Aspergillus clavatus GN=ACLA_026330 PE=4 SV=1
Length = 577
Score = 35.4 bits (80), Expect = 2.7
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Frame = -3
Query: 523 GARPNIFFAAPPLVWRGENRKGGTYDLTYLWKLHRMIRETLSSQQSQDLHSIFTDWY*GI 344
G+RP + FA P+ +G N G Y L Y W+L + + + D+ I+ W G+
Sbjct: 168 GSRPQLLFAVLPIADKGANFSGKHYVLCYDWRLRTFLARSFNWLPG-DIRDIWAVWSEGL 226
Query: 343 ----LNFPRI 326
+ PR+
Sbjct: 227 TVYTITIPRL 236
>tr|Q7UIE7|Q7UIE7_RHOBA Putative uncharacterized protein
OS=Rhodopirellula baltica GN=RB12581 PE=4 SV=1
Length = 174
Score = 35.4 bits (80), Expect = 2.7
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = +1
Query: 127 LHFRNKSPDPLLSTKRKQKEPGRESLIWSISLPLRTKWRRN 249
L RN+SP+PLL T + K R + W+ +R WR +
Sbjct: 133 LDARNRSPNPLLKTSWRMKANSRSRITWTPKTKIRDGWRNS 173
>tr|B6KNM5|B6KNM5_TOXGO Putative uncharacterized protein
OS=Toxoplasma gondii ME49 GN=TGME49_053930 PE=4 SV=1
Length = 1857
Score = 34.7 bits (78), Expect = 4.5
Identities = 16/33 (48%), Positives = 19/33 (57%)
Frame = +2
Query: 128 CISGISLPTPCFPPRESKKNPGGKV*FGQSPCP 226
C+ G S PTPC P + PGG+ G SPCP
Sbjct: 52 CLEGASEPTPC-PAGTFRDQPGGEALDGCSPCP 83
>tr|Q07YM3|Q07YM3_SHEFN ATP synthase A chain OS=Shewanella
frigidimarina (strain NCIMB 400) GN=Sfri_3053 PE=3 SV=1
Length = 246
Score = 33.9 bits (76), Expect = 7.7
Identities = 26/95 (27%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Frame = -2
Query: 281 QDPPASRYEDRFRRHLVRRGKEIDQIKLSRPGSFCFLLVESKGSGDLFRKCKTTFVPDAL 102
+D SR+++ ++ K+I+++ LS P + L G LF T+ + +
Sbjct: 45 KDMQRSRWQNLLEVVVITISKQIEEVGLSNPHKYLGFL------GSLFLFIATSAICTVI 98
Query: 101 RGFEPP----SVLRITQFCVWCAYPRFEAKEREGV 9
GFEPP S CV+ A P F E++G+
Sbjct: 99 PGFEPPTGSLSSTVALALCVFVAVPMF-GIEKQGL 132
>tr|B6KD79|B6KD79_TOXGO Putative uncharacterized protein
OS=Toxoplasma gondii ME49 GN=TGME49_071360 PE=4 SV=1
Length = 464
Score = 33.9 bits (76), Expect = 7.7
Identities = 22/69 (31%), Positives = 33/69 (47%)
Frame = +2
Query: 113 EQKSSCISGISLPTPCFPPRESKKNPGGKV*FGQSPCPSELSGDETDLRIEMRVGPVASV 292
E + C+S + P+ P SK GG G+ C + + ET R R P+AS+
Sbjct: 46 ELQKQCLSSSAAPSFSSPFSSSKPASGGSKRSGRRRCGAGAA--ETAERPSARAAPLASL 103
Query: 293 SPEAKSIKR 319
SP A ++ R
Sbjct: 104 SPAASALSR 112
|
|
|
- |
|
|
- |
|
|
Pp1s25_348V6.1 |
|
|
403268 |
|
|
DK943515
|
488
|
hypothetical protein
|
sporophyte
|
CL1586Contig1
|
-
|
-
|
Pp1s1309_3V6.1
|
90555
|
|
|
DK943515
|
|
|
YMU02A01NGRL0003_B07 |
|
|
YMU02 |
|
|
488 |
|
|
hypothetical protein |
|
|
DK943515 |
|
|
young leaves |
|
|
CL1586Contig1 |
|
|
TGGCTTGCAAAGCTGAGATTAGACAAGGATGTTGAACAGATGTCTGTAGAGGTGGAAAGG
CGGTTAGAACGAAAAGCGTACGCGGCCAAGAAGTGGAGCAAGAATGCATATGTACCTGCT
TCATACTGCCTATGAGGAACACTTAGGGAAGCAAGGTAAATAGTTGAATGTGTGTGCGCC
TGGTGTTGAAAAGTGTTTCCTGCTTCAATGCAAAAGAGACGTCCACAAAAATTCTTCTGA
GCAGCAGGAAGCACGGGCCTTCTATGATTGACTTGGCGAGTGCTGTGCATGCTCGACCAG
TTTGTAACAATCTATCAAGAAGAGGTGTTGAGGGAGAGAAAAGGATTTGGGAATTGGGGG
GGTGTGCATCTTCTACAGAAAGCAATGCTCTCTGTTTTGCGGTTGTTGAAGTCCCTATGT
TGAGTCCATGCTGCTAGCATCAGCAACAGCTTGCGAAAGTCAATGTTCTAATTCCTTGGT
GTTTGGGC |
|
|
- |
|
|
Link to BlastX Result : Swiss-Prot |
|
|
sp|Q5B0Y5|SET1_EMENI Histone-lysine N-methyltransferase, H3 lysine-4 specific OS=Emericella nidulans |
|
|
69 |
|
|
33.5 |
|
|
0.49 |
|
|
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK943515|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_B07, 5'
(473 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q5B0Y5|SET1_EMENI Histone-lysine N-methyltransferase, H3 lysi... 33 0.49
sp|Q9ZML2|ISCS_HELPJ Cysteine desulfurase OS=Helicobacter pylori... 31 3.2
sp|O25008|ISCS_HELPY Cysteine desulfurase OS=Helicobacter pylori... 30 5.4
>sp|Q5B0Y5|SET1_EMENI Histone-lysine N-methyltransferase, H3
lysine-4 specific OS=Emericella nidulans GN=set1 PE=3
SV=1
Length = 1220
Score = 33.5 bits (75), Expect = 0.49
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = -3
Query: 441 SQAVADASSMDST*GLQQPQ-NREHCFL*KMHTPPIPKSFSLPQHLFLIDCYKLVEHAQH 265
S + A A + D G +Q + N + + +HTPP P + SL Q + ++ KLV
Sbjct: 130 SPSQAKAPNGDEPDGFRQARANVSNSTMTPLHTPPTPTTHSLSQRVAIVKGSKLVHDPDR 189
Query: 264 SPSQS*KAR 238
+PS+ + R
Sbjct: 190 APSKDKRKR 198
>sp|Q9ZML2|ISCS_HELPJ Cysteine desulfurase OS=Helicobacter pylori
J99 GN=iscS PE=3 SV=1
Length = 387
Score = 30.8 bits (68), Expect = 3.2
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +3
Query: 243 PSMIDLASAVHARPVCNNLSRRGVEGEKRIWELGGCASSTESNALC 380
P ++ + VH P +S RG+EGE +W+L + + + C
Sbjct: 283 PDVMVVGDRVHRVPNTTLISVRGIEGEAMLWDLNRSNIAASTGSAC 328
>sp|O25008|ISCS_HELPY Cysteine desulfurase OS=Helicobacter pylori
GN=iscS PE=3 SV=1
Length = 387
Score = 30.0 bits (66), Expect = 5.4
Identities = 12/46 (26%), Positives = 23/46 (50%)
Frame = +3
Query: 243 PSMIDLASAVHARPVCNNLSRRGVEGEKRIWELGGCASSTESNALC 380
P ++ + +H P +S RG+EGE +W+L + + + C
Sbjct: 283 PDVMVVGDRIHRVPNTTLVSVRGIEGEAMLWDLNRSNIAASTGSAC 328
|
|
|
Link to BlastX Result : TrEMBL |
|
|
tr|Q4FVX1|Q4FVX1_LEIMA Putative uncharacterized protein OS=Leishmania major strain Friedlin |
|
|
49 |
|
|
35.0 |
|
|
1.9 |
|
|
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK943515|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_B07, 5'
(473 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|Q4FVX1|Q4FVX1_LEIMA Putative uncharacterized protein OS=Leish... 35 1.9
tr|Q8A4J5|Q8A4J5_BACTN Conserved protein found in conjugate tran... 35 2.4
tr|B0ULW0|B0ULW0_METS4 Phosphate butyryltransferase OS=Methyloba... 35 2.4
tr|B8IB58|B8IB58_METNO MaoC domain protein dehydratase OS=Methyl... 33 7.1
tr|B8GD81|B8GD81_9CHLR Transcriptional regulator, LacI family OS... 33 7.1
tr|B0U993|B0U993_METS4 Putative uncharacterized protein OS=Methy... 33 9.3
tr|A9WEH6|A9WEH6_CHLAA Alanine racemase OS=Chloroflexus aurantia... 33 9.3
tr|B2QGQ9|B2QGQ9_9CHLR Transcriptional regulator, LacI family OS... 33 9.3
>tr|Q4FVX1|Q4FVX1_LEIMA Putative uncharacterized protein
OS=Leishmania major strain Friedlin GN=LMJ_1430 PE=4
SV=1
Length = 896
Score = 35.0 bits (79), Expect = 1.9
Identities = 19/49 (38%), Positives = 26/49 (53%)
Frame = -2
Query: 409 LNIGTSTTAKQRALLSVEDAHPPNSQILFSPSTPLLDRLLQTGRACTAL 263
L I STTA++R LL + HPP++ SP+ D + AC AL
Sbjct: 682 LGIAVSTTARERLLLGLSPTHPPSAVPPHSPACVGEDAYQECVTACAAL 730
>tr|Q8A4J5|Q8A4J5_BACTN Conserved protein found in conjugate
transposon OS=Bacteroides thetaiotaomicron GN=BT_2604
PE=4 SV=1
Length = 235
Score = 34.7 bits (78), Expect = 2.4
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = -1
Query: 272 HSTRQVNHRRPVLPAAQKNFCGRLFCIEAGNTFQHQAHTHSTIYLAS 132
H R N + +A + FCGRLFC AG + ++H H+ + S
Sbjct: 23 HLKRFYNEKENPFFSAFRVFCGRLFCAGAGACWHQRSHEHADLVFRS 69
>tr|B0ULW0|B0ULW0_METS4 Phosphate butyryltransferase
OS=Methylobacterium sp. (strain 4-46) GN=M446_6099 PE=4
SV=1
Length = 482
Score = 34.7 bits (78), Expect = 2.4
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = -2
Query: 109 MKQVHMHSCSTSWPRTLFVLTAFPPLQTSVQHPC 8
+ +VH+H W R + PP++T+V HPC
Sbjct: 154 LPEVHLHERGAQWRRLIDAARGRPPIRTAVVHPC 187
>tr|B8IB58|B8IB58_METNO MaoC domain protein dehydratase
OS=Methylobacterium nodulans ORS 2060 GN=Mnod_0409 PE=4
SV=1
Length = 480
Score = 33.1 bits (74), Expect = 7.1
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -2
Query: 109 MKQVHMHSCSTSWPRTLFVLTAFPPLQTSVQHPC 8
+ +VH+H W R + P++T+V HPC
Sbjct: 154 LPEVHLHERGAQWRRLIAAAQGLAPIRTAVVHPC 187
>tr|B8GD81|B8GD81_9CHLR Transcriptional regulator, LacI family
OS=Chloroflexus aggregans DSM 9485 GN=Cagg_2268 PE=4
SV=1
Length = 339
Score = 33.1 bits (74), Expect = 7.1
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = -2
Query: 418 QHGLNIGTSTTAKQRALLSVEDAHPPNSQILFSPSTPLLDRLLQTGRACTALAKSIIEG 242
+ GL IGT A++ +DA P Q LF P + + + + GR C L +I+EG
Sbjct: 268 ERGLTIGTDL-----AIIGFDDA--PMVQYLFPPLSSVRQPIAEAGRKCIELLVAIVEG 319
>tr|B0U993|B0U993_METS4 Putative uncharacterized protein
OS=Methylobacterium sp. (strain 4-46) GN=M446_0810 PE=4
SV=1
Length = 930
Score = 32.7 bits (73), Expect = 9.3
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +3
Query: 198 KETSTKILLSSRKHGPSMIDLASAVHARPVCNNLSRRGVEGEKRIW 335
+E+ K+ HG + + V ARPV N + R GE+R+W
Sbjct: 818 RESIAKVRQFFEAHGDTRFEQIGDVEARPVTNRVGWRKGHGEERVW 863
>tr|A9WEH6|A9WEH6_CHLAA Alanine racemase OS=Chloroflexus aurantiacus
(strain ATCC 29366 / DSM 635 / J-10-fl) GN=Caur_2023
PE=4 SV=1
Length = 341
Score = 32.7 bits (73), Expect = 9.3
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = -2
Query: 412 GLNIGTSTTAKQRALLSVEDAHPPNSQILFSPSTPLLDRLLQTGRACTALAKSIIEG 242
GL IGT A++ +DA P Q LF P T + + + G C L S++EG
Sbjct: 272 GLEIGTDL-----AIIGFDDA--PMVQYLFPPLTSVRQPIAEAGHKCVELLVSLVEG 321
>tr|B2QGQ9|B2QGQ9_9CHLR Transcriptional regulator, LacI family
OS=Chloroflexus sp. Y-400-fl GN=Chy400DRAFT_0152 PE=4
SV=1
Length = 341
Score = 32.7 bits (73), Expect = 9.3
Identities = 20/57 (35%), Positives = 28/57 (49%)
Frame = -2
Query: 412 GLNIGTSTTAKQRALLSVEDAHPPNSQILFSPSTPLLDRLLQTGRACTALAKSIIEG 242
GL IGT A++ +DA P Q LF P T + + + G C L S++EG
Sbjct: 272 GLEIGTDL-----AIIGFDDA--PMVQYLFPPLTSVRQPIAEAGHKCVELLVSLVEG 321
|
|
|
- |
|
|
- |
|
|
Pp1s1309_3V6.1 |
|
|
90555 |
|
|
DK943516
|
343
|
hypothetical protein
|
sporophyte
|
-
|
-
|
-
|
Pp1s111_119V6.1
|
411011
|
|
|
DK943516
|
|
|
YMU02A01NGRL0003_B08 |
|
|
YMU02 |
|
|
343 |
|
|
hypothetical protein |
|
|
DK943516 |
|
|
young leaves |
|
|
- |
|
|
GGCTTCGTTTTACTAGGCAAAGCAATTGAATGCTGCTACTTTAACCACAGTTGCGTTTCT
TGCCACAGCTTTTGCCTCTCTCCTTGTTGGAGTGTTTTTGAGCTACTAATTCTTTCTCTC
ATGTGAGCACATTGAGAGAGACTGGCAACTTTTGTATTTGACCTACCCCACTTATAAAGA
TTTAAAAGACACACAGTAGGAACTCACTCTCCAATTTCCTACCTCTACTTAGAGATTTCA
TTATATCAATCTGTTTCTGAAGTTTGACATATATACTGGTGCTTTTTGTTACTAATATAG
ATCGACTAGACTTCTTTCAGGACTACCTAGTGGGGTTGTTTGA |
|
|
- |
|
|
Link to BlastX Result : Swiss-Prot |
|
|
sp|Q32RZ3|MATK_STAPU Maturase K OS=Staurastrum punctulatum |
|
|
30 |
|
|
29.3 |
|
|
6.4 |
|
|
|
|
|
Link to BlastX Result : TrEMBL |
|
|
- |
|
|
- |
|
|
- |
|
|
- |
|
|
|
|
|
- |
|
|
- |
|
|
Pp1s111_119V6.1 |
|
|
411011 |
|
|
DK943517
|
772
|
ribulose-bisphosphate carboxylase small chain
|
sporophyte
|
CL2Contig2
|
K01602
|
AT1G67090.1
|
Pp1s161_16V6.1
|
147927
|
|
|
DK943517
|
|
|
YMU02A01NGRL0003_B10 |
|
|
YMU02 |
|
|
772 |
|
|
ribulose-bisphosphate carboxylase small chain |
|
|
DK943517 |
|
|
young leaves |
|
|
CL2Contig2 |
|
|
GGAGAGCTCCAGATTAGCAGAGCAAAGGGAGAGTGATTGTACGCAGTATTCAGTATGGCC
ATCTCCATAGCCGCTTCCTCGGCAGTTGTCGCTCCTAGCTGCGCCCCCGCAGAGAGCTTG
TCAAAGAGCTTCTCTGGTCTCAAGGCCACTACCCTGTTCGCCCCCAAGAGCCCCAACCCG
CTCGCCATCTCTAATGGCAGCCGTGTGAGCGCCATGCTTGTGTGGAAGCCGTATGACAAC
AAGAAGTTCGAGACTCTGTCCTACTTGCCGCCTTTGTCAAGTGAGCAGATTGCGAAGCAG
GTGGACTTCATGGTCCGAAAAGGCTGGACCCCTTGCATTGAGTTCGACAAAATCGGGAGC
GTGTACCGAGAGCACTTCCACGGCAGCGGCTACTACGATGGGCGGTACTGGGTGATGTGG
AAGCTGCCCATGTTTGGCTGCCAAGATGCCGCTGCTGTGCTGCGTGAAATTGCAGAGTGC
GCCAAGGAGTATCCTGAAGCCTTCATCCGCGTGCTGGGCTTTGACGCTNAGAGGCAGGTG
CAGGTCTCCGGCTTCCTTGTCCAGAAGCCCTCTGTCTAAACTTTCTTAAAGCAAGCCAAT
TTAGTTGGCATGGATGCCTTGCTTCCCATTTCCCAACTGGCGCCTAAACAAGCTTGCTCT
TAATGAGCTTTTTGTGTCCCAGCCCCCTTTGCATACCTTAAGGGAAACAACTTTCCCCGG
TGGGGGGGCTTCCCCTTGGGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
|
|
- |
|
|
Link to BlastX Result : Swiss-Prot |
|
|
sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain, chloroplastic OS=Lactuca sativa |
|
|
156 |
|
|
187.0 |
|
|
0.0 |
|
|
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK943517|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_B10, 5'
(742 letters)
Database: uniprot_sprot.fasta
412,525 sequences; 148,809,765 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chai... 187 7e-47
sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chai... 182 2e-45
sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chai... 181 3e-45
sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chai... 181 4e-45
sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chai... 180 6e-45
sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chai... 180 8e-45
sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chai... 180 8e-45
sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small cha... 180 8e-45
sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small cha... 180 8e-45
sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small ch... 180 8e-45
sp|O64416|RBS_MARPA Ribulose bisphosphate carboxylase small chai... 179 2e-44
sp|P10797|RBS2B_ARATH Ribulose bisphosphate carboxylase small ch... 179 2e-44
sp|P08705|RBS_HELAN Ribulose bisphosphate carboxylase small chai... 178 2e-44
sp|Q43832|RBS2_SPIOL Ribulose bisphosphate carboxylase small cha... 178 2e-44
sp|P16031|RBS_LARLA Ribulose bisphosphate carboxylase small chai... 178 3e-44
sp|P05348|RBS_MAIZE Ribulose bisphosphate carboxylase small chai... 177 4e-44
sp|Q40004|RBS_HORVU Ribulose bisphosphate carboxylase small chai... 177 4e-44
sp|P10796|RBS1B_ARATH Ribulose bisphosphate carboxylase small ch... 177 4e-44
sp|P10798|RBS3B_ARATH Ribulose bisphosphate carboxylase small ch... 177 5e-44
sp|P19308|RBS2_LEMGI Ribulose bisphosphate carboxylase small cha... 177 7e-44
sp|P00871|RBS1_WHEAT Ribulose bisphosphate carboxylase small cha... 177 7e-44
sp|O65194|RBS_MEDSA Ribulose bisphosphate carboxylase small chai... 176 1e-43
sp|Q39746|RBS4_FLAPR Ribulose bisphosphate carboxylase small cha... 176 1e-43
sp|P05346|RBS1_BRANA Ribulose bisphosphate carboxylase small cha... 176 1e-43
sp|P19310|RBS4_LEMGI Ribulose bisphosphate carboxylase small cha... 176 2e-43
sp|P00872|RBS1_LEMGI Ribulose bisphosphate carboxylase small cha... 176 2e-43
sp|P08135|RBS_RAPSA Ribulose bisphosphate carboxylase small chai... 175 2e-43
sp|Q02980|RBS_MALSP Ribulose bisphosphate carboxylase small chai... 175 2e-43
sp|P07089|RBS_FLATR Ribulose bisphosphate carboxylase small chai... 175 2e-43
sp|P26667|RBS2_WHEAT Ribulose bisphosphate carboxylase small cha... 175 2e-43
>sp|Q40250|RBS_LACSA Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Lactuca sativa GN=RBCS PE=2 SV=1
Length = 181
Score = 187 bits (474), Expect = 7e-47
Identities = 88/156 (56%), Positives = 110/156 (70%), Gaps = 5/156 (3%)
Frame = +1
Query: 118 LSKSFSGLKATTLF--APKSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSE 285
L+ F+GLK+ F K+ N + SNG RV M VW P KK+ETLSYLPPLS E
Sbjct: 22 LAAPFTGLKSNVAFPVTKKANNDFSSLPSNGGRVQCMKVWPPIGLKKYETLSYLPPLSDE 81
Query: 286 QIAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVL 462
++K++D+++R W PC+EF+ + G VYREH H GYYDGRYW MWKLPMFGC D+A V+
Sbjct: 82 ALSKEIDYLIRNKWIPCLEFELEHGFVYREHHHSPGYYDGRYWTMWKLPMFGCTDSAQVM 141
Query: 463 REIAECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKP 570
+E+ EC KEYP AFIRV+GFD RQVQ F+V KP
Sbjct: 142 KEVGECKKEYPNAFIRVIGFDNIRQVQCISFIVAKP 177
>sp|O48550|RBS_ZANAE Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Zantedeschia aethiopica GN=RBCS PE=2
SV=1
Length = 178
Score = 182 bits (461), Expect = 2e-45
Identities = 84/148 (56%), Positives = 103/148 (69%)
Frame = +1
Query: 127 SFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQVD 306
S + T FA S P SNG RV M VW P KKFETLSYLPPL+ EQ+ ++VD
Sbjct: 31 SSAAFPVTRKFADSSKLP---SNGLRVRCMQVWPPEGKKKFETLSYLPPLTREQLGQEVD 87
Query: 307 FMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECAK 486
+++R GW PCIEF K+G VYRE+ + GYYDGRYW MWKLPMFGC D++ VL+E+ EC+K
Sbjct: 88 YLIRNGWIPCIEFCKVGFVYREYHNSPGYYDGRYWTMWKLPMFGCTDSSQVLKEVDECSK 147
Query: 487 EYPEAFIRVLGFDAXRQVQVSGFLVQKP 570
YP+ F R++GFD RQVQ FL KP
Sbjct: 148 AYPDYFNRIIGFDNTRQVQCISFLTYKP 175
>sp|Q96542|RBS_BETVE Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Betula verrucosa GN=RBCS1 PE=2 SV=1
Length = 182
Score = 181 bits (460), Expect = 3e-45
Identities = 88/152 (57%), Positives = 109/152 (71%), Gaps = 5/152 (3%)
Frame = +1
Query: 130 FSGLKATTLF--APKSPNPLA--ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 297
F+ LK+T+ F K+ N + SNG RV M VW P KKFETLSYLPPLSSEQ+AK
Sbjct: 28 FTCLKSTSAFPVTQKTNNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSEQLAK 87
Query: 298 QVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIA 474
+VD+++RK PC+EF+ + G VYREH GYYDGRYW MWKLPMFGC D++ VL+E+
Sbjct: 88 EVDYLLRKNLIPCLEFELEHGFVYREHNRSPGYYDGRYWTMWKLPMFGCNDSSQVLKELE 147
Query: 475 ECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKP 570
EC K YP AFIR++GFD RQVQ+ F+ KP
Sbjct: 148 ECKKAYPSAFIRIIGFDNKRQVQIISFIAYKP 179
>sp|P10053|RBS_PINTH Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Pinus thunbergii GN=RBCS PE=2 SV=1
Length = 171
Score = 181 bits (459), Expect = 4e-45
Identities = 86/156 (55%), Positives = 108/156 (69%), Gaps = 8/156 (5%)
Frame = +1
Query: 127 SFSGLKATTLFAP--KSPNPLA------ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSS 282
+F+GLK+T F K N A SNG RV M VW P+ N KFETLSYLP L+
Sbjct: 15 AFTGLKSTAQFPSSFKMSNAAAEWEQKTTSNGGRVRCMQVWPPFGNPKFETLSYLPTLTE 74
Query: 283 EQIAKQVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVL 462
EQ+ K+V++++R W PC+EFD GS+ R++ GYYDGRYWVMWKLPMFGC +A+ V+
Sbjct: 75 EQLVKEVEYLLRNKWVPCLEFDLEGSISRKYNRSPGYYDGRYWVMWKLPMFGCTEASQVI 134
Query: 463 REIAECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKP 570
E+ ECAK YP+AFIRV+GFD RQVQ F+V KP
Sbjct: 135 NEVRECAKAYPKAFIRVIGFDNVRQVQCISFIVHKP 170
>sp|P17673|RBS_TRIRP Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Trifolium repens GN=RBCS PE=3 SV=1
Length = 178
Score = 180 bits (457), Expect = 6e-45
Identities = 86/157 (54%), Positives = 112/157 (71%), Gaps = 4/157 (2%)
Frame = +1
Query: 118 LSKSFSGLKATTLF-APKSPNPLA--ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQ 288
L+ F+GLK++ F K N + SNGSRV+ M VW P KKFETLSYLPPL+ EQ
Sbjct: 21 LATPFTGLKSSAGFPVTKKNNDITSITSNGSRVNCMQVWPPVGKKKFETLSYLPPLTDEQ 80
Query: 289 IAKQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLR 465
+ K+V++++RKGW PC+EF+ + G V+R++ GYYDGRYW MW+LP+FG DAA VL+
Sbjct: 81 LLKEVEYLLRKGWVPCVEFELEKGFVHRQYNSSPGYYDGRYWTMWRLPLFGTTDAAQVLK 140
Query: 466 EIAECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKPSV 576
E+AEC EYPEAFIR++GFD RQVQ F+ P V
Sbjct: 141 EVAECKAEYPEAFIRIIGFDNVRQVQCISFIASTPKV 177
>sp|P24007|RBS_PYRPY Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Pyrus pyrifolia GN=RBCS PE=2 SV=1
Length = 183
Score = 180 bits (456), Expect = 8e-45
Identities = 86/152 (56%), Positives = 111/152 (73%), Gaps = 4/152 (2%)
Frame = +1
Query: 130 FSGLKATTLF--APKSPNPLAI-SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQ 300
F+GLK+++ F KS + +I SNG RV M VW P KKFETLSYLPPLSSE +AK+
Sbjct: 30 FNGLKSSSAFPVTRKSNDITSIASNGGRVQCMQVWPPLGLKKFETLSYLPPLSSESLAKE 89
Query: 301 VDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAE 477
VD+++RK W PC+EF+ + G VYRE+ GYYDGRYW MWKLPMFGC D++ VL+E+ E
Sbjct: 90 VDYLLRKNWVPCLEFELETGFVYRENHRSPGYYDGRYWTMWKLPMFGCTDSSQVLKELEE 149
Query: 478 CAKEYPEAFIRVLGFDAXRQVQVSGFLVQKPS 573
K YP++FIR++GFD RQVQ F+ KP+
Sbjct: 150 AKKAYPQSFIRIIGFDNVRQVQCISFIAYKPA 181
>sp|O65349|RBS_CAPAN Ribulose bisphosphate carboxylase small chain,
chloroplastic OS=Capsicum annuum GN=RBCS PE=2 SV=1
Length = 187
Score = 180 bits (456), Expect = 8e-45
Identities = 85/158 (53%), Positives = 106/158 (67%), Gaps = 5/158 (3%)
Frame = +1
Query: 127 SFSGLKATTLFAPKSPNPLAI----SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIA 294
SF+GLK+ F L I SNG RV MLVW P + KK+ETLSYLP LS EQ+
Sbjct: 25 SFNGLKSAASFPVTRKQDLDITSIASNGGRVECMLVWPPINKKKYETLSYLPDLSDEQLL 84
Query: 295 KQVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREI 471
K+++++++KGW PC+EF+ + G VYREH GYYDGRYW MWKLPMFGC DA VL E+
Sbjct: 85 KEIEYLLQKGWVPCLEFETEHGFVYREHHRSPGYYDGRYWTMWKLPMFGCTDATQVLNEV 144
Query: 472 AECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKPSV*TF 585
E K YP+A+IR++GFD RQVQ F+ KP F
Sbjct: 145 QEAKKAYPQAWIRIIGFDNVRQVQCISFIAYKPEATKF 182
>sp|P19312|RBS6_LEMGI Ribulose bisphosphate carboxylase small chain
SSU5B, chloroplastic OS=Lemna gibba GN=SSU5B PE=3 SV=1
Length = 177
Score = 180 bits (456), Expect = 8e-45
Identities = 86/152 (56%), Positives = 106/152 (69%), Gaps = 4/152 (2%)
Frame = +1
Query: 130 FSGLKATTLFAP--KSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 297
F+GL+++ F K+ N L+ SNG RVS M VW P KKFETLSYLPPLS E +AK
Sbjct: 26 FNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAK 85
Query: 298 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAE 477
+VD+++R W PCIEF K G VYRE+ GYYDGRYW MWKLPMFGC DA+ V+ E+ E
Sbjct: 86 EVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEE 145
Query: 478 CAKEYPEAFIRVLGFDAXRQVQVSGFLVQKPS 573
K YPE F+R++GFD RQVQ F+ KP+
Sbjct: 146 AKKAYPEYFVRIIGFDNKRQVQCISFIAYKPT 177
>sp|P19311|RBS5_LEMGI Ribulose bisphosphate carboxylase small chain
SSU5A, chloroplastic OS=Lemna gibba GN=SSU5A PE=3 SV=1
Length = 177
Score = 180 bits (456), Expect = 8e-45
Identities = 86/152 (56%), Positives = 106/152 (69%), Gaps = 4/152 (2%)
Frame = +1
Query: 130 FSGLKATTLFAP--KSPNPLAI--SNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 297
F+GL+++ F K+ N L+ SNG RVS M VW P KKFETLSYLPPLS E +AK
Sbjct: 26 FNGLRSSVAFPATRKANNDLSTLPSNGGRVSCMQVWPPEGLKKFETLSYLPPLSVEDLAK 85
Query: 298 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAE 477
+VD+++R W PCIEF K G VYRE+ GYYDGRYW MWKLPMFGC DA+ V+ E+ E
Sbjct: 86 EVDYLLRNDWVPCIEFSKEGFVYRENHASPGYYDGRYWTMWKLPMFGCTDASQVIAEVEE 145
Query: 478 CAKEYPEAFIRVLGFDAXRQVQVSGFLVQKPS 573
K YPE F+R++GFD RQVQ F+ KP+
Sbjct: 146 AKKAYPEYFVRIIGFDNKRQVQCISFIAYKPT 177
>sp|P10795|RBS1A_ARATH Ribulose bisphosphate carboxylase small chain
1A, chloroplastic OS=Arabidopsis thaliana GN=RBCS-1A
PE=1 SV=2
Length = 180
Score = 180 bits (456), Expect = 8e-45
Identities = 84/152 (55%), Positives = 108/152 (71%), Gaps = 5/152 (3%)
Frame = +1
Query: 130 FSGLKATTLFAP--KSPNPLA--ISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 297
F+GLK++ F K+ N + SNG RV+ M VW P KKFETLSYLP L+ ++AK
Sbjct: 24 FNGLKSSAAFPATRKANNDITSITSNGGRVNCMQVWPPIGKKKFETLSYLPDLTDSELAK 83
Query: 298 QVDFMVRKGWTPCIEFD-KIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIA 474
+VD+++R W PC+EF+ + G VYREH + GYYDGRYW MWKLP+FGC D+A VL+E+
Sbjct: 84 EVDYLIRNKWIPCVEFELEHGFVYREHGNSPGYYDGRYWTMWKLPLFGCTDSAQVLKEVE 143
Query: 475 ECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKP 570
EC KEYP AFIR++GFD RQVQ F+ KP
Sbjct: 144 ECKKEYPNAFIRIIGFDNTRQVQCISFIAYKP 175
|
|
|
Link to BlastX Result : TrEMBL |
|
|
tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small chain OS=Pteris vittata |
|
|
152 |
|
|
286.0 |
|
|
0.0 |
|
|
BLASTX 2.2.19 [Nov-02-2008]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DK943517|Adiantum capillus-veneris mRNA, clone:
YMU02A01NGRL0003_B10, 5'
(742 letters)
Database: uniprot_trembl.fasta
7,341,751 sequences; 2,391,615,440 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small c... 286 8e-76
tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small c... 201 3e-50
tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small c... 198 3e-49
tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small c... 197 5e-49
tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small c... 197 5e-49
tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small c... 197 5e-49
tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small c... 195 3e-48
tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small c... 191 4e-47
tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small c... 191 6e-47
tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small c... 191 6e-47
tr|Q9SEB9|Q9SEB9_LACSA Ribulose bisphosphate carboxylase small c... 189 2e-46
tr|A9T9D5|A9T9D5_PHYPA Ribulose bisphosphate carboxylase small c... 188 4e-46
tr|A9TWU8|A9TWU8_PHYPA Ribulose bisphosphate carboxylase small c... 187 5e-46
tr|A9TVU8|A9TVU8_PHYPA Ribulose bisphosphate carboxylase small c... 187 8e-46
tr|A9SRS0|A9SRS0_PHYPA Ribulose bisphosphate carboxylase small c... 187 8e-46
tr|A9U4X8|A9U4X8_PHYPA Ribulose bisphosphate carboxylase small c... 186 2e-45
tr|A9U4X7|A9U4X7_PHYPA Ribulose bisphosphate carboxylase small c... 186 2e-45
tr|A9SCN2|A9SCN2_PHYPA Ribulose bisphosphate carboxylase small c... 185 3e-45
tr|Q3LFQ4|Q3LFQ4_PANGI Ribulose bisphosphate carboxylase small c... 184 4e-45
tr|A9S8M9|A9S8M9_PHYPA Ribulose bisphosphate carboxylase small c... 183 1e-44
tr|A9S8M6|A9S8M6_PHYPA Ribulose bisphosphate carboxylase small c... 183 1e-44
tr|Q5I8Y4|Q5I8Y4_9FABA Ribulose bisphosphate carboxylase small c... 182 2e-44
tr|A9RG04|A9RG04_PHYPA Ribulose bisphosphate carboxylase small c... 182 2e-44
tr|A9U377|A9U377_PHYPA Ribulose bisphosphate carboxylase small c... 181 3e-44
tr|A9NZM2|A9NZM2_PICSI Ribulose bisphosphate carboxylase small c... 181 3e-44
tr|A9PI67|A9PI67_POPTR Ribulose bisphosphate carboxylase small c... 180 8e-44
tr|A7LIT5|A7LIT5_9ROSI Ribulose bisphosphate carboxylase small c... 180 8e-44
tr|Q0WVH4|Q0WVH4_ARATH Ribulose bisphosphate carboxylase small c... 180 1e-43
tr|A0FIP7|A0FIP7_CAMSI Ribulose bisphosphate carboxylase small c... 180 1e-43
tr|Q6RWD8|Q6RWD8_CAPAN Ribulose bisphosphate carboxylase small c... 179 1e-43
>tr|Q43110|Q43110_PTEVI Ribulose bisphosphate carboxylase small
chain OS=Pteris vittata GN=rbcS4 PE=3 SV=1
Length = 174
Score = 286 bits (733), Expect = 8e-76
Identities = 133/152 (87%), Positives = 144/152 (94%)
Frame = +1
Query: 118 LSKSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAK 297
LSKSFSGLKA TLFAPK NPLAISNGSR+SAMLVWKPYDNKKFETLSYLPPL+++QIAK
Sbjct: 22 LSKSFSGLKANTLFAPKCANPLAISNGSRISAMLVWKPYDNKKFETLSYLPPLTNDQIAK 81
Query: 298 QVDFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAE 477
QV++MVRKGWTPCIEFD IGSVYREHFHGSGYYDGRYW+MWKLPMFGC D+ +VLREIAE
Sbjct: 82 QVEYMVRKGWTPCIEFDTIGSVYREHFHGSGYYDGRYWIMWKLPMFGCTDSGSVLREIAE 141
Query: 478 CAKEYPEAFIRVLGFDAXRQVQVSGFLVQKPS 573
CAKEYP AFIRVLGFDA RQVQV+GFLV+KPS
Sbjct: 142 CAKEYPTAFIRVLGFDAKRQVQVAGFLVKKPS 173
>tr|A9T3W5|A9T3W5_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_87740 PE=3 SV=1
Length = 179
Score = 201 bits (512), Expect = 3e-50
Identities = 94/153 (61%), Positives = 115/153 (75%), Gaps = 3/153 (1%)
Frame = +1
Query: 124 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 303
K FSGLK+TTLFA K+ ++ NGSRV M VW P KFET SYLPPL+ +QIAKQV
Sbjct: 27 KQFSGLKSTTLFASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86
Query: 304 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 474
DFM+++ PCIEFD +GSV R +F G SGYYDGRYW MWKLPMFGC D+A VLREI
Sbjct: 87 DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQ 146
Query: 475 ECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKPS 573
EC + +P ++RVLGFD+ +QVQ+ GFLV +P+
Sbjct: 147 ECKQSFPSCWVRVLGFDSKKQVQICGFLVARPN 179
>tr|A9T3X7|A9T3X7_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_87752 PE=3 SV=1
Length = 179
Score = 198 bits (504), Expect = 3e-49
Identities = 93/153 (60%), Positives = 114/153 (74%), Gaps = 3/153 (1%)
Frame = +1
Query: 124 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 303
K FSGLK+TTL A K+ ++ NGSRV M VW P KFET SYLPPL+ +QIAKQV
Sbjct: 27 KQFSGLKSTTLSASKARRLSSVHNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 86
Query: 304 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 474
DFM+++ PCIEFD +GSV R +F G SGYYDGRYW MWKLPMFGC D+A VLREI
Sbjct: 87 DFMIQQNLIPCIEFDTVGSVSRTNFSGPGSSGYYDGRYWTMWKLPMFGCTDSAQVLREIQ 146
Query: 475 ECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKPS 573
EC + +P ++RVLGFD+ +QVQ+ GFLV +P+
Sbjct: 147 ECKQSFPSCWVRVLGFDSKKQVQICGFLVARPN 179
>tr|Q9SXH1|Q9SXH1_PHYPA Ribulose bisphosphate carboxylase small
chain (Fragment) OS=Physcomitrella patens PE=2 SV=1
Length = 214
Score = 197 bits (502), Expect = 5e-49
Identities = 90/153 (58%), Positives = 115/153 (75%), Gaps = 3/153 (1%)
Frame = +1
Query: 124 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 303
K+FSGLK+ TLF+ K+ ++ NGSRV M VW P KFET SYLPPL+ +QIAKQV
Sbjct: 62 KAFSGLKSATLFSGKTQKLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 121
Query: 304 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 474
D+M+++ PCIEFD +GSV R +F G SGYYDGRYW MWKLPMFGC D++ VLREI
Sbjct: 122 DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 181
Query: 475 ECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKPS 573
EC ++P ++RVLGFD+ +QVQ+ GFLV +P+
Sbjct: 182 ECKSQFPSCWVRVLGFDSKKQVQICGFLVSRPN 214
>tr|Q75WT7|Q75WT7_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens GN=PprbcS1
PE=2 SV=1
Length = 184
Score = 197 bits (502), Expect = 5e-49
Identities = 91/153 (59%), Positives = 113/153 (73%), Gaps = 3/153 (1%)
Frame = +1
Query: 124 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 303
K+FSGLK+ TLF KS ++ NGSRV M VW P KFET SYLPPLS +QIA+QV
Sbjct: 32 KAFSGLKSATLFTSKSQQLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLSDDQIARQV 91
Query: 304 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 474
D+M+++ PCIEFD +G+V R +F G SGYYDGRYW MWKLPMFGC D++ VLREI
Sbjct: 92 DYMIQQNLIPCIEFDTVGAVSRTNFSGSGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 151
Query: 475 ECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKPS 573
EC YP ++RVLGFD+ +QVQ+ GFLV +P+
Sbjct: 152 ECKTSYPSCWVRVLGFDSKKQVQICGFLVARPN 184
>tr|A9TCL7|A9TCL7_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_221004 PE=3 SV=1
Length = 184
Score = 197 bits (502), Expect = 5e-49
Identities = 91/153 (59%), Positives = 114/153 (74%), Gaps = 3/153 (1%)
Frame = +1
Query: 124 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 303
K+FSGLK TLF+ K+ A+ NGSRV M VW P KFET SYLPPL+ +QIAKQV
Sbjct: 32 KAFSGLKPATLFSSKTQKLGAVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDQIAKQV 91
Query: 304 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 474
D+M+++ PCIEFD +GSV R +F G SGYYDGRYW MWKLPMFGC D++ VLREI
Sbjct: 92 DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 151
Query: 475 ECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKPS 573
EC ++P ++RVLGFD+ +QVQ+ GFLV +P+
Sbjct: 152 ECKSQFPSCWVRVLGFDSKKQVQICGFLVSRPN 184
>tr|A9TT85|A9TT85_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_225236 PE=3 SV=1
Length = 183
Score = 195 bits (495), Expect = 3e-48
Identities = 88/153 (57%), Positives = 115/153 (75%), Gaps = 3/153 (1%)
Frame = +1
Query: 124 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 303
K+FSGLK+ TLF+ ++ ++ NGSRV M VW P KFET SYLPPL+ ++IAKQV
Sbjct: 31 KAFSGLKSATLFSSQAQTLSSVQNGSRVQCMQVWNPIGQPKFETFSYLPPLTDDEIAKQV 90
Query: 304 DFMVRKGWTPCIEFDKIGSVYREHFHG---SGYYDGRYWVMWKLPMFGCQDAAAVLREIA 474
D+M+++ PCIEFD +GSV R +F G SGYYDGRYW MWKLPMFGC D++ VLREI
Sbjct: 91 DYMIQQNLIPCIEFDTVGSVSRTNFSGAGSSGYYDGRYWTMWKLPMFGCTDSSQVLREIQ 150
Query: 475 ECAKEYPEAFIRVLGFDAXRQVQVSGFLVQKPS 573
EC ++P ++RVLGFD+ +QVQ+ GFLV +P+
Sbjct: 151 ECKTQFPSCWVRVLGFDSKKQVQICGFLVSRPN 183
>tr|A9RJ57|A9RJ57_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_115069 PE=3 SV=1
Length = 181
Score = 191 bits (485), Expect = 4e-47
Identities = 87/150 (58%), Positives = 109/150 (72%)
Frame = +1
Query: 124 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 303
K+FSGLK+ T+F+ K+ N ++ NGSRV M VW P KFET SYLPPLS + IAKQV
Sbjct: 32 KAFSGLKSATVFSGKAQNSSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91
Query: 304 DFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECA 483
++M+++ PC+EFD V R + GYYDGRYW MWKLPMFGCQD+A VLREI EC
Sbjct: 92 EYMIQQKLIPCLEFDNANGVSRTNNSSPGYYDGRYWTMWKLPMFGCQDSAQVLREIEECK 151
Query: 484 KEYPEAFIRVLGFDAXRQVQVSGFLVQKPS 573
K +P F+RVLGFD +QVQ+ GFLV +P+
Sbjct: 152 KTFPGCFVRVLGFDNVKQVQICGFLVARPN 181
>tr|A9TKI7|A9TKI7_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_146969 PE=3 SV=1
Length = 181
Score = 191 bits (484), Expect = 6e-47
Identities = 88/150 (58%), Positives = 109/150 (72%)
Frame = +1
Query: 124 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 303
K+FSGLK++TLF+ K+ + ++ NGSRV M VW P KFET SYLPPLS + IAKQV
Sbjct: 32 KAFSGLKSSTLFSSKAQSLSSVQNGSRVQCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91
Query: 304 DFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECA 483
D+M+++ PC+EFD V R + GYYDGRYW MWKLPMFGCQD A VLREI EC
Sbjct: 92 DYMIQQKLIPCLEFDNADGVSRTNNSSPGYYDGRYWTMWKLPMFGCQDPAQVLREIEECK 151
Query: 484 KEYPEAFIRVLGFDAXRQVQVSGFLVQKPS 573
K +P F+RVLGFD +QVQ+ GFLV +P+
Sbjct: 152 KTFPGCFVRVLGFDNVKQVQICGFLVARPN 181
>tr|A9S3R8|A9S3R8_PHYPA Ribulose bisphosphate carboxylase small
chain OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_123666 PE=3 SV=1
Length = 181
Score = 191 bits (484), Expect = 6e-47
Identities = 88/150 (58%), Positives = 110/150 (73%)
Frame = +1
Query: 124 KSFSGLKATTLFAPKSPNPLAISNGSRVSAMLVWKPYDNKKFETLSYLPPLSSEQIAKQV 303
K+FSGLK+ TLF+ +S ++ NGSRV+ M VW P KFET SYLPPLS + IAKQV
Sbjct: 32 KAFSGLKSATLFSSQSQQLSSVQNGSRVNCMQVWNPIGMTKFETFSYLPPLSDDAIAKQV 91
Query: 304 DFMVRKGWTPCIEFDKIGSVYREHFHGSGYYDGRYWVMWKLPMFGCQDAAAVLREIAECA 483
++M+++ PC+EFD V RE+ GYYDGRYW MWKLPMFGCQD+A VLREI EC
Sbjct: 92 EYMIQQKLIPCLEFDNSKGVTRENNSSPGYYDGRYWTMWKLPMFGCQDSAQVLREIEECK 151
Query: 484 KEYPEAFIRVLGFDAXRQVQVSGFLVQKPS 573
K +P F+RVLGFD +QVQ+ GFLV +P+
Sbjct: 152 KTFPGCFVRVLGFDNVKQVQICGFLVARPN 181
|
|
|
K01602 |
|
|
AT1G67090.1 |
|
|
Pp1s161_16V6.1 |
|
|
147927 |
|
|
DK943518
|
216
|
hypothetical protein
|
sporophyte
|
CL1Contig3
|
-
|
-
|
Pp1s46_207V6.1
|
113458
|
|
|
DK943518
|
|
|
YMU02A01NGRL0003_B11 |
|
|
YMU02 |
|
|
216 |
|
|
hypothetical protein |
|
|
DK943518 |
|
|
young leaves |
|
|
CL1Contig3 |
|
|
TATCGTAGCGGGTATAGTTTAGTGGTAAAAATGTGACTCGTCTCGCAGTGATTTTGATAG
TTGAGGGATCGTATCTCGGCTAAATTAACTGAAAGAAAAAACTTTATCTTCGCAGAAAAT
ATGTGTTTTCTTATTATTTCTCCAAAATTAGAGGTAGATTAATCAATCTCGTCACTCATT
CATTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA |
|
|
- |
|
|
Link to BlastX Result : Swiss-Prot |
|
|
- |
|
|
- |
|
|
- |
|
|
- |
|
|
|
|
|
Link to BlastX Result : TrEMBL |
|
|
- |
|
|
- |
|
|
- |
|
|
- |
|
|
|
|
|
- |
|
|
- |
|
|
Pp1s46_207V6.1 |
|
|
113458 |
|
